Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.5e-90 336.3 184 100.0
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 2.7e-55 219.2 156 73.7
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 1.3e-54 216.9 156 73.1
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 4.5e-50 201.8 154 66.2
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.9e-48 196.4 154 64.9
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 5.4e-48 194.9 154 63.0
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 2.1e-47 193.0 154 63.0
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 2.1e-47 193.0 156 62.2
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 2.1e-47 193.0 156 63.5
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 2.7e-47 192.6 154 63.0
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.7e-47 192.6 154 61.7
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 2.7e-47 192.6 154 63.6
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 3.5e-47 192.2 156 61.5
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 4.6e-47 191.8 154 62.3
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 6.0e-47 191.4 154 62.3
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 7.9e-47 191.0 156 60.3
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 7.9e-47 191.0 156 60.3
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 7.9e-47 191.0 156 60.3
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.0e-46 190.7 156 61.5
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 1.3e-46 190.3 154 62.3
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.8e-46 189.9 154 62.3
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.8e-46 189.9 154 62.3
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 3.0e-46 189.1 154 61.7
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 6.7e-46 188.0 156 59.0
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 6.7e-46 188.0 156 60.9
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 8.7e-46 187.6 156 60.9
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 8.7e-46 187.6 154 61.7
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.1e-45 187.2 154 61.0
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 1.1e-45 187.2 154 61.7
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.9e-45 186.4 154 61.0
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 2.5e-45 186.0 154 61.0
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 3.3e-45 185.7 156 59.0
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 3.3e-45 185.7 156 60.3
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 4.3e-45 185.3 154 60.4
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 4.3e-45 185.3 156 59.6
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 4.3e-45 185.3 154 61.7
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 5.6e-45 184.9 154 60.4
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.6e-45 184.9 154 60.4
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.6e-45 184.9 154 59.7
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 7.4e-45 184.5 154 60.4
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 7.4e-45 184.5 156 58.3
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 9.6e-45 184.1 154 60.4
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 9.6e-45 184.1 154 60.4
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 9.6e-45 184.1 154 60.4
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 1.3e-44 183.7 156 59.6
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.6e-44 183.3 156 59.6
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 2.1e-44 183.0 154 59.7
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.1e-44 183.0 154 59.7
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.1e-44 183.0 154 58.4
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 2.8e-44 182.6 154 58.4
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 3.7e-44 182.2 154 59.1
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 3.7e-44 182.2 156 57.7
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 3.7e-44 182.2 156 57.7
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 3.7e-44 182.2 154 59.1
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 6.2e-44 181.4 156 57.7
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 8.1e-44 181.0 154 59.7
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 8.1e-44 181.0 156 59.0
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 8.1e-44 181.0 156 59.0
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.1e-43 180.6 154 59.7
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.4e-43 180.3 154 57.8
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.4e-43 180.3 154 59.7
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.8e-43 179.9 156 59.0
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.8e-43 179.9 182 51.1
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.4e-43 179.5 154 59.7
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 2.4e-43 179.5 154 59.1
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 4.0e-43 178.7 156 57.1
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 5.3e-43 178.3 181 54.7
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 6.9e-43 177.9 154 58.4
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 9.0e-43 177.6 153 58.8
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 9.0e-43 177.6 156 56.4
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.2e-42 177.2 154 57.1
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 1.2e-42 177.2 172 54.1
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.5e-42 176.8 156 55.8
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 1.5e-42 176.8 156 56.4
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.4e-42 175.6 154 56.5
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 4.5e-42 175.3 154 58.4
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.5e-42 175.3 156 55.8
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 7.6e-42 174.5 154 57.8
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 7.6e-42 174.5 156 55.8
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 7.6e-42 174.5 156 55.8
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.0e-41 174.1 156 55.8
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 1.3e-41 173.7 154 57.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 1.7e-41 173.3 154 57.8
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.7e-41 173.3 156 54.5
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 3.8e-41 172.2 156 55.1
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 3.8e-41 172.2 156 55.1
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 3.8e-41 172.2 156 55.1
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 6.5e-41 171.4 156 55.1
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 8.4e-41 171.0 156 53.8
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.9e-40 169.9 156 54.5
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 2.5e-40 169.5 156 53.2
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 3.2e-40 169.1 154 57.1
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 4.2e-40 168.7 154 54.5
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.6e-39 166.8 156 56.4
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.1e-39 166.4 154 55.8
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.1e-39 166.4 156 55.1
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.1e-39 166.4 156 56.4
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 2.7e-39 166.0 187 48.7
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 2.7e-39 166.0 211 47.4
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.3e-38 162.9 154 53.9
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 2.3e-38 162.9 103 73.8
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.6e-36 156.8 154 55.2
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 2.8e-36 156.0 158 55.1
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.1e-35 152.5 109 64.2
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 3.0e-30 136.0 154 46.1
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 8.7e-30 134.4 130 51.5
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.1e-29 134.0 130 51.5
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 1.9e-29 133.3 154 44.8
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 3.1e-27 125.9 117 55.6
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 5.3e-27 125.2 140 50.0
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.8e-22 110.2 152 39.5
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.3e-14 83.2 144 36.8
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 1.8e-06 57.0 41 61.0


User provided reference genes

Program Settings