Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 2.2e-200 702.2 390 100.0
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 5.7e-196 687.6 390 97.4
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.2e-142 510.4 335 73.1
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 3.2e-138 495.7 333 69.4
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 8.6e-136 487.6 330 71.5
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.1e-135 487.3 333 67.6
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.9e-135 486.5 339 68.4
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 4.7e-134 481.9 329 69.6
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.4e-133 480.3 334 68.0
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.8e-133 479.9 337 68.2
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.3e-133 479.6 333 66.7
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 2.3e-133 479.6 324 70.4
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 4.0e-133 478.8 328 71.0
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 5.2e-133 478.4 327 68.5
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 5.2e-133 478.4 330 68.5
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.2e-132 477.2 331 67.7
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.2e-132 477.2 337 68.0
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 2.0e-132 476.5 327 69.7
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 2.0e-132 476.5 331 68.9
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 3.4e-132 475.7 335 68.4
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 3.4e-132 475.7 324 69.4
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 4.4e-132 475.3 331 67.7
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 5.8e-132 474.9 330 70.6
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 7.6e-132 474.6 320 70.6
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 2.2e-131 473.0 331 67.4
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 3.7e-131 472.2 324 68.2
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 8.4e-131 471.1 330 68.5
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.1e-130 470.7 329 67.5
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.4e-130 470.3 330 66.4
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.4e-130 470.3 331 66.5
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 2.4e-130 469.5 330 66.1
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 3.2e-130 469.2 324 67.3
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 3.2e-130 469.2 321 69.5
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 5.4e-130 468.4 334 66.2
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 5.4e-130 468.4 332 66.9
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 4.6e-129 465.3 333 67.3
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 7.8e-129 464.5 321 67.0
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.3e-128 463.8 325 66.8
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.7e-128 463.4 326 68.1
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 2.3e-128 463.0 331 66.5
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 3.0e-128 462.6 333 66.1
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 3.9e-128 462.2 338 65.4
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 3.9e-128 462.2 334 66.5
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 5.1e-128 461.8 316 69.9
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 5.1e-128 461.8 332 66.9
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 6.6e-128 461.5 335 66.3
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 8.6e-128 461.1 330 66.1
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 8.6e-128 461.1 327 68.2
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.1e-127 460.7 322 67.4
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 2.5e-127 459.5 323 68.1
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 5.6e-127 458.4 333 66.1
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 7.3e-127 458.0 323 67.8
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 7.3e-127 458.0 326 66.6
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 9.6e-127 457.6 333 66.7
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 9.6e-127 457.6 333 66.7
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 9.6e-127 457.6 321 67.6
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 9.6e-127 457.6 333 66.7
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 9.6e-127 457.6 330 66.4
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.6e-126 455.7 331 68.3
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 3.6e-126 455.7 333 64.3
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 6.2e-126 454.9 321 67.0
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 8.1e-126 454.5 333 65.8
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 8.1e-126 454.5 331 66.2
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 1.8e-125 453.4 331 66.8
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 1.8e-125 453.4 331 66.8
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 1.8e-125 453.4 335 64.5
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 1.8e-125 453.4 321 67.0
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 3.1e-125 452.6 333 66.1
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 3.1e-125 452.6 331 65.6
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 4.0e-125 452.2 310 68.1
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 4.0e-125 452.2 320 67.8
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 4.0e-125 452.2 344 64.5
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 6.8e-125 451.4 321 67.9
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 8.9e-125 451.1 329 64.4
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.5e-124 450.3 324 67.0
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.5e-124 450.3 308 68.2
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 2.0e-124 449.9 330 65.2
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 2.9e-123 446.0 327 66.1
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 3.8e-123 445.7 327 66.4
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 3.8e-123 445.7 327 66.4
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 4.9e-123 445.3 327 65.7
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.1e-122 444.1 317 67.2
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 4.2e-122 442.2 316 64.6
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.0e-120 437.6 330 64.2
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 2.3e-120 436.4 338 63.0
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.5e-119 433.7 353 60.1
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.3e-119 432.2 338 61.8
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.3e-119 432.2 327 63.0
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 3.6e-118 429.1 327 63.0
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 1.1e-117 427.6 302 66.9
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 1.1e-117 427.6 320 65.3
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 7.6e-116 421.4 335 60.3
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.4e-114 417.2 294 67.0
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 3.2e-114 416.0 432 50.7
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 2.1e-113 413.3 325 61.8
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 5.1e-112 408.7 305 64.9
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.3e-110 404.1 328 59.8
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 6.9e-109 398.3 318 62.3
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 3.5e-105 386.0 290 63.1
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 6.5e-99 365.2 333 55.6
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 8.2e-94 348.2 322 53.7
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 4.1e-93 345.9 274 63.9
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 6.1e-89 332.0 309 53.4
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 7.9e-89 331.6 309 53.7
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.3e-88 330.1 247 62.8
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 6.7e-88 328.6 340 53.8
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.8e-72 277.3 228 62.7
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 9.8e-39 165.2 99 71.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 4.7e-33 146.4 330 33.6
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.4e-29 134.8 93 65.6
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 6.8e-24 115.9 130 48.5
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.6e-23 114.0 65 73.8
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 4.4e-23 113.2 79 63.3
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.1e-16 92.0 47 89.4
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 5.2e-16 89.7 48 85.4
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.6e-12 78.2 266 24.8
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 2.8e-09 67.4 128 32.0
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 4.0e-08 63.5 48 62.5
PSO541G0451 Papaver somniferum HOM05D006704 ORTHO05D305146 1.5e-07 61.6 36 77.8


User provided reference genes

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