Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 3.8e-130 468.4 275 100.0
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 3.1e-116 422.2 265 92.8
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 1.0e-45 188.0 280 41.8
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 1.5e-38 164.1 281 38.8
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 1.3e-37 161.0 277 39.7
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 2.4e-31 140.2 284 38.0
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 1.2e-30 137.9 258 38.4
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 4.5e-30 136.0 285 34.7
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.3e-29 134.4 252 39.3
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 5.0e-29 132.5 262 36.6
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 4.2e-28 129.4 259 37.5
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 5.5e-28 129.0 288 36.1
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 7.2e-28 128.6 269 37.2
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 1.2e-27 127.9 266 37.2
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 1.2e-27 127.9 265 36.2
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 2.7e-27 126.7 235 35.3
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 1.0e-26 124.8 282 35.8
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 2.3e-26 123.6 237 35.0
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 3.0e-26 123.2 283 34.6
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 3.0e-26 123.2 245 34.3
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 3.0e-26 123.2 282 35.5
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 8.8e-26 121.7 277 35.4
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 8.8e-26 121.7 243 38.3
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 8.8e-26 121.7 243 38.3
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.1e-25 121.3 241 37.3
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 3.3e-25 119.8 245 34.3
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 3.3e-25 119.8 242 37.6
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 3.3e-25 119.8 242 35.5
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 5.7e-25 119.0 256 35.2
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 7.4e-25 118.6 242 36.4
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 7.4e-25 118.6 257 35.0
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 2.2e-24 117.1 236 36.4
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 2.2e-24 117.1 283 33.2
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 4.8e-24 115.9 258 36.0
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 5.3e-23 112.5 236 38.6
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 2.6e-22 110.2 258 31.4
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 3.4e-22 109.8 241 34.9
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 4.5e-22 109.4 263 33.1
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 4.5e-22 109.4 236 36.0
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 1.0e-21 108.2 238 34.0
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 1.3e-21 107.8 290 34.8
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 2.2e-21 107.1 281 34.5
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 3.8e-21 106.3 238 34.5
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 5.0e-21 105.9 291 30.6
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 6.5e-21 105.5 252 33.3
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 8.5e-21 105.1 287 31.0
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 8.5e-21 105.1 238 34.5
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 1.1e-20 104.8 256 31.6
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.4e-20 104.4 237 33.8
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 3.2e-20 103.2 287 30.0
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 5.5e-20 102.4 287 30.3
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 7.2e-20 102.1 248 33.9
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 9.4e-20 101.7 231 34.2
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 1.6e-19 100.9 251 33.1
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 2.7e-19 100.1 256 32.4
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 3.6e-19 99.8 287 31.0
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 1.0e-18 98.2 252 31.0
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 1.0e-18 98.2 285 31.2
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.8e-18 97.4 265 31.7
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 5.1e-18 95.9 248 35.1
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 6.7e-18 95.5 232 31.5
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 6.7e-18 95.5 243 31.7
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 1.5e-17 94.4 235 35.3
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 4.4e-17 92.8 235 34.9
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 7.4e-17 92.0 261 31.0
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.2e-16 90.5 209 35.9
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 6.3e-16 89.0 259 29.3
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 7.0e-15 85.5 232 32.3
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.6e-14 84.3 115 47.0
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 3.5e-14 83.2 259 30.5
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 5.9e-14 82.4 266 28.9
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 6.5e-13 79.0 145 38.6
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 6.5e-13 79.0 216 32.4
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.1e-12 78.2 239 31.0
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 1.1e-12 78.2 266 27.4
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 4.2e-12 76.3 240 26.7
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 3.6e-11 73.2 244 28.3
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 3.6e-11 73.2 229 31.0
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 4.7e-11 72.8 243 29.6
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 6.1e-11 72.4 244 27.9
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 6.1e-11 72.4 250 28.0
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.4e-10 71.2 230 30.0
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 3.0e-10 70.1 185 30.8
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 1.5e-09 67.8 221 32.6
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 2.6e-09 67.0 188 31.4
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 3.3e-09 66.6 192 32.3
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 4.4e-09 66.2 196 31.6
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 8.2e-08 62.0 77 42.9
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.4e-07 61.2 195 30.8
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 3.1e-07 60.1 253 26.5
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 9.1e-07 58.5 78 43.6
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 1.2e-06 58.2 280 24.6
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.7e-06 57.0 103 35.9
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 2.7e-06 57.0 86 44.2


User provided reference genes

Program Settings