Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 3.5e-95 351.7 187 100.0
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 1.2e-90 336.7 187 95.7
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 5.8e-90 334.3 187 96.3
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 8.5e-49 197.6 188 64.4
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 8.5e-49 197.6 182 63.7
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 5.5e-48 194.9 185 63.8
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 7.2e-48 194.5 181 65.2
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 8.0e-47 191.0 181 63.0
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 1.0e-46 190.7 184 62.5
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 4.0e-46 188.7 183 64.5
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 5.2e-46 188.3 184 62.0
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 1.2e-45 187.2 180 62.2
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 1.2e-45 187.2 180 62.2
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 2.6e-45 186.0 179 61.5
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 2.6e-45 186.0 183 62.8
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 2.6e-45 186.0 186 61.8
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 7.5e-45 184.5 184 60.9
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 9.8e-45 184.1 184 60.9
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 1.3e-44 183.7 182 62.1
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 2.2e-44 183.0 187 59.9
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 2.8e-44 182.6 184 62.0
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 3.7e-44 182.2 181 60.8
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 4.9e-44 181.8 183 59.6
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 4.9e-44 181.8 184 59.8
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 1.1e-43 180.6 181 60.8
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 1.1e-43 180.6 185 60.0
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.4e-43 180.3 189 60.3
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 1.8e-43 179.9 181 60.8
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 2.4e-43 179.5 186 59.7
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 2.4e-43 179.5 185 60.0
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 5.4e-43 178.3 189 60.3
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 7.0e-43 177.9 187 61.0
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 7.0e-43 177.9 186 58.1
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 9.1e-43 177.6 181 59.1
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.6e-42 176.8 181 58.6
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 1.6e-42 176.8 181 58.0
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 2.7e-42 176.0 188 58.0
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 2.7e-42 176.0 184 57.1
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 2.7e-42 176.0 194 55.7
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 3.5e-42 175.6 181 60.2
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 4.5e-42 175.3 183 57.9
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 4.5e-42 175.3 184 57.6
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 4.5e-42 175.3 188 57.4
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 5.9e-42 174.9 194 58.8
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 5.9e-42 174.9 181 58.6
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 1.0e-41 174.1 183 57.9
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 1.0e-41 174.1 187 58.3
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 2.3e-41 172.9 185 57.3
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 2.9e-41 172.6 178 58.4
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 3.8e-41 172.2 182 59.3
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 3.8e-41 172.2 183 58.5
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 3.8e-41 172.2 185 58.4
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 5.0e-41 171.8 181 58.0
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 5.0e-41 171.8 181 59.1
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 6.6e-41 171.4 183 57.4
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 8.6e-41 171.0 189 57.1
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 1.5e-40 170.2 186 58.6
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 1.5e-40 170.2 181 58.0
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 2.5e-40 169.5 181 58.6
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 2.5e-40 169.5 181 58.0
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.5e-40 169.5 181 58.0
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 7.2e-40 167.9 194 55.7
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 2.1e-39 166.4 179 57.0
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 1.0e-38 164.1 183 56.3
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 1.0e-38 164.1 185 56.8
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 1.0e-38 164.1 187 56.7
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 1.8e-38 163.3 183 56.8
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 2.3e-38 162.9 183 56.8
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 2.3e-38 162.9 183 56.8
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 2.3e-38 162.9 183 56.8
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 3.0e-38 162.5 196 57.1
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 4.0e-38 162.2 163 59.5
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 5.2e-38 161.8 183 56.3
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 5.2e-38 161.8 183 55.7
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 2.0e-37 159.8 192 54.7
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 3.4e-37 159.1 183 55.7
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 3.4e-37 159.1 187 54.5
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 7.5e-37 157.9 200 51.0
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 9.8e-37 157.5 182 55.5
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 2.9e-36 156.0 186 53.2
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 2.9e-36 156.0 188 55.9
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 2.9e-36 156.0 181 53.6
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 8.3e-36 154.5 183 54.1
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 8.3e-36 154.5 183 54.1
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 1.1e-35 154.1 175 57.1
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 1.4e-35 153.7 180 52.8
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 1.8e-35 153.3 181 54.1
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 2.4e-35 152.9 183 53.6
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 2.4e-35 152.9 188 51.1
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 3.2e-35 152.5 189 54.0
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 4.1e-35 152.1 188 54.8
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 7.0e-35 151.4 181 54.7
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 1.2e-34 150.6 189 53.4
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 1.0e-33 147.5 230 46.1
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 3.9e-33 145.6 155 58.7
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 6.6e-33 144.8 185 50.8
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 3.3e-32 142.5 162 55.6
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 5.6e-32 141.7 193 49.2
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 1.2e-31 140.6 199 51.8
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 6.8e-30 134.8 131 57.3
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 2.0e-29 133.3 120 60.8
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 4.4e-29 132.1 146 55.5
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 7.5e-29 131.3 186 47.8
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 1.1e-27 127.5 186 46.8
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.1e-27 127.5 87 80.5
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 1.4e-27 127.1 115 60.9
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 5.4e-27 125.2 169 49.1
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 7.8e-26 121.3 90 75.6
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 7.8e-26 121.3 151 55.0
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 1.7e-25 120.2 89 73.0
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 5.6e-24 115.2 115 57.4
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 9.5e-24 114.4 249 39.0
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 1.6e-23 113.6 134 53.7
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 2.1e-23 113.2 136 50.0
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 3.6e-23 112.5 90 72.2
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 1.1e-22 110.9 189 47.1
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 1.1e-22 110.9 128 50.8
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 1.4e-22 110.5 132 50.0
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 3.1e-22 109.4 160 45.0
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.0e-21 106.7 168 44.0
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 8.3e-20 101.3 194 41.2
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 1.7e-17 93.6 187 42.2
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 2.5e-16 89.7 115 47.8
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 1.2e-15 87.4 87 57.5
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 2.0e-13 80.1 121 44.6
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 2.2e-12 76.6 95 47.4
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 8.4e-12 74.7 143 42.0
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 1.6e-10 70.5 109 42.2
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.5e-10 69.3 58 75.9
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 1.0e-09 67.8 114 44.7
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 8.6e-09 64.7 75 52.0
Mapoly0001s0539 Marchantia polymorpha HOM05D024399 ORTHO05D023494 1.1e-08 64.3 88 47.7
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 4.3e-08 62.4 93 46.2
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 5.6e-08 62.0 74 51.4
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 5.6e-08 62.0 74 51.4
FAN24G2610 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.4e-06 57.4 43 81.4
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 2.4e-06 56.6 94 40.4
SHI06070 Sapria himalayana HOM05D005654 ORTHO05D006438 5.2e-06 55.5 91 42.9


User provided reference genes

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