Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 4.7e-283 977.2 515 100.0
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 2.5e-268 928.3 519 95.4
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 7.5e-71 272.3 509 43.4
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 7.5e-71 272.3 548 40.1
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 3.3e-66 256.9 508 41.7
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 9.5e-66 255.4 492 42.7
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.2e-63 248.4 497 40.8
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 2.0e-63 247.7 531 39.9
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 9.8e-63 245.4 537 39.3
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 3.2e-61 240.4 547 36.0
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 4.6e-60 236.5 521 37.8
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 1.9e-58 231.1 606 37.1
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 4.7e-57 226.5 539 38.2
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 1.1e-56 225.3 527 37.2
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 4.0e-56 223.4 501 38.3
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 5.2e-56 223.0 539 37.3
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.6e-55 220.7 526 36.7
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 3.4e-55 220.3 531 37.1
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 2.2e-54 217.6 526 36.3
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 2.4e-53 214.2 530 37.0
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 5.4e-53 213.0 527 36.4
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 7.1e-53 212.6 521 36.9
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 7.8e-52 209.1 521 37.2
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.3e-51 207.6 529 36.5
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 2.3e-51 207.6 519 38.9
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 3.0e-51 207.2 522 36.4
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.9e-51 206.8 549 36.8
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 3.9e-51 206.8 533 37.3
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 1.1e-50 205.3 535 36.3
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.5e-50 204.1 546 35.9
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 3.3e-50 203.8 554 35.0
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 9.6e-50 202.2 530 36.4
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 2.8e-49 200.7 530 36.2
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 2.8e-49 200.7 513 37.4
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 2.8e-49 200.7 506 37.7
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 4.7e-49 199.9 533 35.8
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 6.2e-49 199.5 529 35.0
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 1.8e-48 198.0 474 38.8
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 2.4e-48 197.6 553 35.4
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 2.4e-48 197.6 528 34.8
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 3.1e-48 197.2 523 36.1
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 6.8e-48 196.1 553 35.4
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 8.9e-48 195.7 523 35.6
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 2.6e-47 194.1 534 36.1
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 3.4e-47 193.7 538 35.3
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 3.4e-47 193.7 539 35.8
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 4.4e-47 193.4 542 34.7
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 5.8e-47 193.0 529 36.7
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 7.6e-47 192.6 556 34.5
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 7.6e-47 192.6 536 36.8
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 9.9e-47 192.2 515 35.9
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 9.9e-47 192.2 535 35.9
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 2.2e-46 191.0 579 33.0
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 6.4e-46 189.5 540 36.3
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 8.4e-46 189.1 525 36.0
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 1.4e-45 188.3 537 35.8
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.9e-45 188.0 534 34.3
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 9.3e-45 185.7 532 35.2
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.7e-44 184.1 521 35.5
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 3.5e-44 183.7 526 35.0
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 1.0e-43 182.2 533 35.5
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.0e-43 182.2 514 34.8
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 2.3e-43 181.0 525 35.2
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.8e-41 174.1 504 34.5
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 6.2e-41 172.9 523 32.5
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 1.8e-40 171.4 521 34.2
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 4.0e-40 170.2 518 35.1
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 2.0e-39 167.9 519 35.1
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 2.6e-39 167.5 540 33.9
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 4.4e-39 166.8 507 34.5
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 5.8e-39 166.4 533 31.7
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.3e-38 165.2 616 31.8
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.4e-37 161.8 471 34.0
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 1.9e-37 161.4 529 34.4
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 2.4e-37 161.0 493 34.1
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 3.2e-37 160.6 475 34.3
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 9.3e-37 159.1 422 36.0
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 2.7e-36 157.5 542 31.9
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 3.5e-36 157.1 541 32.2
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 6.0e-36 156.4 480 34.4
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 7.9e-36 156.0 505 33.1
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 3.0e-35 154.1 453 34.4
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 3.9e-35 153.7 485 32.6
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 1.9e-34 151.4 295 41.4
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.9e-34 151.4 505 32.9
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 9.6e-34 149.1 504 33.5
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 3.1e-32 144.1 528 30.9
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 4.0e-32 143.7 524 31.3
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 2.6e-31 141.0 524 31.3
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 7.6e-31 139.4 500 32.2
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 6.4e-30 136.3 523 29.1
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 8.4e-30 136.0 568 30.1
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 2.4e-29 134.4 653 28.6
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 4.2e-29 133.7 297 38.0
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 1.6e-28 131.7 538 28.8
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 2.1e-28 131.3 480 31.7
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 2.7e-28 131.0 535 29.2
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 3.5e-28 130.6 539 29.1
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 5.1e-27 126.7 540 29.3
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 3.3e-26 124.0 518 27.4
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 5.6e-26 123.2 545 29.9
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 1.6e-25 121.7 549 29.5
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 1.1e-24 119.0 518 27.2
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 1.2e-23 115.5 525 27.0
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 1.2e-23 115.5 525 27.0
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 1.3e-22 112.1 516 29.8
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 1.7e-22 111.7 477 31.4
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 2.5e-21 107.8 513 26.9
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 7.1e-21 106.3 527 25.8
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 3.5e-20 104.0 532 26.9
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 6.0e-20 103.2 532 26.9
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 1.8e-19 101.7 533 26.5
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 1.3e-17 95.5 527 25.2
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 2.8e-17 94.4 194 40.2
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 3.1e-16 90.9 596 25.8
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 4.1e-16 90.5 570 25.4
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 5.8e-15 86.7 284 32.4
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 1.3e-14 85.5 186 36.6
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.1e-13 82.4 590 25.6
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 7.2e-13 79.7 541 27.4
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 8.7e-11 72.8 361 26.0
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 5.9e-07 60.1 419 28.6
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 3.8e-06 57.4 106 38.7


User provided reference genes

Program Settings