Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 9.4e-237 823.2 422 100.0
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 3.8e-206 721.5 423 89.6
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 2.8e-108 396.4 384 56.5
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.4e-107 394.0 385 54.5
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.0e-94 349.4 376 52.4
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 7.5e-93 345.1 373 51.7
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 2.4e-91 340.1 370 52.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 2.0e-90 337.0 368 51.4
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.3e-89 334.3 376 48.9
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.3e-89 334.3 367 51.0
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 4.7e-87 325.9 370 50.8
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 4.7e-87 325.9 357 50.1
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 8.0e-87 325.1 389 47.6
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.3e-86 323.6 358 50.3
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 4.0e-86 322.8 365 49.6
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 2.0e-85 320.5 368 49.5
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 2.6e-85 320.1 365 48.5
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 3.4e-85 319.7 365 48.8
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 4.4e-85 319.3 372 47.8
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 7.5e-85 318.5 406 45.3
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 9.8e-85 318.2 388 47.9
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 3.7e-84 316.2 371 48.8
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 6.3e-84 315.5 369 49.3
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 6.3e-84 315.5 357 49.9
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 3.1e-83 313.2 377 48.3
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 3.1e-83 313.2 368 48.6
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.1e-83 312.8 350 50.6
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 5.4e-83 312.4 359 50.1
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 7.0e-83 312.0 393 48.3
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 1.6e-82 310.8 380 50.0
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.7e-82 310.1 382 46.9
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 4.5e-82 309.3 360 49.2
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 4.5e-82 309.3 364 49.7
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 1.0e-81 308.1 364 48.4
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.0e-81 308.1 385 45.5
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.7e-81 307.4 350 49.7
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 5.0e-81 305.8 350 49.4
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 5.0e-81 305.8 350 49.4
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 6.6e-81 305.4 378 47.6
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 6.6e-81 305.4 372 45.4
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.1e-80 304.7 366 48.6
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.1e-80 304.7 373 49.1
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 1.9e-80 303.9 374 44.9
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.9e-80 303.9 309 54.7
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 3.3e-80 303.1 372 50.0
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 9.5e-80 301.6 371 45.3
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.2e-79 301.2 371 47.2
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 1.6e-79 300.8 366 46.7
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.6e-79 300.8 365 50.7
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.6e-79 300.8 365 50.7
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.1e-79 300.4 377 50.1
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.1e-79 300.4 358 49.7
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 2.8e-79 300.1 377 49.6
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 2.8e-79 300.1 369 44.7
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 4.7e-79 299.3 376 49.2
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 2.3e-78 297.0 361 48.2
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.3e-78 297.0 350 48.6
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 8.9e-78 295.0 366 45.9
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.9e-78 295.0 379 45.1
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.9e-78 295.0 379 45.1
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 1.2e-77 294.7 365 50.4
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.2e-77 294.7 373 48.5
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 1.2e-77 294.7 389 45.0
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 1.5e-77 294.3 389 44.5
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.0e-77 293.9 389 46.3
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 2.6e-77 293.5 331 50.8
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 5.8e-77 292.4 372 49.2
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 9.8e-77 291.6 370 48.6
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 2.9e-76 290.0 369 45.0
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 4.9e-76 289.3 362 45.9
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 4.9e-76 289.3 370 44.9
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.4e-75 287.7 383 44.4
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 1.4e-75 287.7 389 43.4
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 3.2e-75 286.6 328 50.9
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 7.0e-75 285.4 329 48.6
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.0e-74 283.9 398 46.0
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 2.7e-74 283.5 367 45.0
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 6.0e-74 282.3 407 42.8
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 1.3e-73 281.2 397 42.6
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 2.3e-73 280.4 365 45.2
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 3.0e-73 280.0 415 44.1
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 2.5e-72 276.9 323 49.2
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 9.5e-72 275.0 364 45.6
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.8e-71 273.5 369 44.4
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 1.8e-70 270.8 393 43.8
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 1.8e-70 270.8 375 47.5
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 3.1e-70 270.0 376 44.1
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 5.8e-69 265.8 344 44.8
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 9.2e-67 258.5 304 52.3
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 2.1e-63 247.3 355 41.4
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 6.2e-63 245.7 300 51.3
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 5.8e-61 239.2 381 39.6
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 2.9e-60 236.9 378 38.4
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 6.6e-57 225.7 306 48.4
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 2.5e-56 223.8 368 40.2
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 2.8e-55 220.3 375 41.3
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 4.0e-54 216.5 286 44.8
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 3.2e-51 206.8 238 51.3
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.3e-48 196.8 235 51.9
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.3e-48 196.8 235 51.9
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 7.3e-48 195.7 280 41.8
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 9.0e-38 162.2 318 35.5
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.1e-35 155.2 237 42.6
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 3.0e-33 147.1 398 31.2
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 4.5e-29 133.3 152 50.0
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.6e-26 124.8 160 46.2
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.7e-26 124.0 239 38.1
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 8.7e-25 119.0 178 42.7
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 2.5e-24 117.5 373 27.9
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.5e-24 117.5 128 52.3
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 4.3e-24 116.7 220 40.9
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.7e-23 113.6 125 46.4
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.7e-23 113.6 125 46.4
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 1.2e-21 108.6 311 29.3
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 3.9e-17 93.6 154 37.7
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.3e-16 90.5 115 41.7
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 2.3e-09 67.8 237 26.2
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 5.1e-09 66.6 133 36.1
Cre09.g400997 Chlamydomonas reinhardtii HOM05D006726 ORTHO05D008328 1.4e-06 58.5 358 22.6


User provided reference genes

Program Settings