Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4122 Papaver somniferum HOM05D008199 ORTHO05D010334 1.9e-28 128.6 72 100.0
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 2.0e-14 82.0 47 76.6
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 1.0e-13 79.7 47 72.3
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 2.2e-13 78.6 47 72.3
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 2.9e-13 78.2 47 72.3
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 3.8e-13 77.8 46 71.7
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 3.8e-13 77.8 46 71.7
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 3.8e-13 77.8 46 71.7
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 5.0e-13 77.4 43 76.7
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 5.0e-13 77.4 47 68.1
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 8.5e-13 76.6 46 67.4
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 8.5e-13 76.6 47 68.1
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 1.1e-12 76.3 46 67.4
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 1.4e-12 75.9 46 69.6
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 1.9e-12 75.5 49 71.4
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 1.9e-12 75.5 49 71.4
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 1.9e-12 75.5 46 67.4
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 2.5e-12 75.1 46 69.6
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 2.5e-12 75.1 43 74.4
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 3.2e-12 74.7 41 73.2
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 3.2e-12 74.7 45 71.1
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 3.2e-12 74.7 46 69.6
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 4.2e-12 74.3 42 76.2
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 4.2e-12 74.3 42 76.2
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 4.2e-12 74.3 42 76.2
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 7.2e-12 73.6 38 81.6
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 7.2e-12 73.6 42 76.2
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 7.2e-12 73.6 42 73.8
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 7.2e-12 73.6 42 73.8
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 7.2e-12 73.6 47 66.0
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 7.2e-12 73.6 38 76.3
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 7.2e-12 73.6 47 66.0
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 9.4e-12 73.2 47 63.8
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 9.4e-12 73.2 47 63.8
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 1.2e-11 72.8 47 66.0
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 1.2e-11 72.8 47 66.0
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 1.6e-11 72.4 41 75.6
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 2.1e-11 72.0 42 71.4
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 2.1e-11 72.0 42 71.4
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 2.1e-11 72.0 42 73.8
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 2.7e-11 71.6 38 76.3
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 3.6e-11 71.2 41 68.3
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 3.6e-11 71.2 41 68.3
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 3.6e-11 71.2 47 63.8
Psat6g236360 Pisum sativum HOM05D008199 ORTHO05D010334 3.6e-11 71.2 42 71.4
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 6.1e-11 70.5 41 73.2
Carub.0004s2158 Capsella rubella HOM05D008199 ORTHO05D010334 7.9e-11 70.1 38 73.7
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 1.0e-10 69.7 37 75.7
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 1.4e-10 69.3 38 73.7
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 1.4e-10 69.3 38 73.7
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 1.4e-10 69.3 39 71.8
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 1.4e-10 69.3 38 73.7
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 1.4e-10 69.3 47 61.7
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 1.8e-10 68.9 38 71.1
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 2.3e-10 68.6 42 66.7
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 2.3e-10 68.6 43 65.1
Phvul.007G011200 Phaseolus vulgaris HOM05D008199 ORTHO05D010334 3.9e-10 67.8 43 62.8
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 3.9e-10 67.8 38 71.1
MBI05_g35603_MAGBIO Magnolia biondii HOM05D008199 ORTHO05D010334 6.7e-10 67.0 40 65.0
Manes.10G036000 Manihot esculenta HOM05D008199 ORTHO05D010334 6.7e-10 67.0 41 63.4
Ciclev10033682m.g Citrus clementina HOM05D008199 ORTHO05D010334 2.0e-09 65.5 39 69.2
SEGI_29944 Sequoiadendron giganteum HOM05D008199 ORTHO05D010334 4.3e-09 64.3 59 50.8
Duzib128G0439 Durio zibethinus HOM05D008199 ORTHO05D010334 2.8e-08 61.6 40 65.0
SHI12594 Sapria himalayana HOM05D008199 ORTHO05D010334 2.6e-06 55.1 64 42.2
Pp3c9_50 Physcomitrium patens HOM05D008199 ORTHO05D010334 7.7e-06 53.5 37 59.5


User provided reference genes

Program Settings