Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 9.3e-128 460.3 247 100.0
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 1.1e-125 453.4 247 96.8
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 2.7e-66 256.1 220 65.9
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 9.5e-64 247.7 218 60.1
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 3.6e-63 245.7 218 59.6
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.5e-61 240.4 258 55.0
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.1e-59 234.2 235 54.9
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 9.2e-59 231.1 254 52.8
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 1.2e-58 230.7 235 57.4
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 3.5e-58 229.2 233 54.5
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.7e-57 226.9 258 51.6
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 3.0e-57 226.1 260 51.2
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 7.3e-56 221.5 239 53.1
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 4.7e-55 218.8 232 53.0
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 2.3e-54 216.5 212 55.7
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 2.3e-54 216.5 242 52.1
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 8.9e-54 214.5 260 50.0
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 8.9e-54 214.5 254 51.6
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.2e-53 214.2 254 50.4
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 4.4e-53 212.2 244 52.9
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 9.9e-53 211.1 208 54.8
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.7e-52 210.3 198 58.1
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.7e-52 210.3 224 51.3
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 2.2e-52 209.9 288 47.6
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 6.4e-52 208.4 241 49.0
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 6.4e-52 208.4 258 49.6
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 8.4e-52 208.0 252 49.2
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 1.1e-51 207.6 259 48.6
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 1.4e-51 207.2 258 49.6
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 5.4e-51 205.3 231 50.2
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 7.1e-51 204.9 246 49.2
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 1.2e-50 204.1 221 52.0
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.6e-50 203.8 249 50.2
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 2.1e-50 203.4 211 52.6
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 3.5e-50 202.6 205 53.2
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 6.0e-50 201.8 212 50.9
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.0e-49 201.1 264 47.0
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 1.0e-49 201.1 251 48.2
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.3e-49 200.7 256 48.0
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 3.0e-49 199.5 246 49.2
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 5.1e-49 198.7 246 50.8
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 6.6e-49 198.4 209 51.7
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 8.6e-49 198.0 216 50.0
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.1e-48 197.6 221 50.7
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 1.5e-48 197.2 220 50.9
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.5e-48 197.2 237 48.1
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.5e-48 197.2 250 47.6
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 2.5e-48 196.4 218 50.9
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 3.3e-48 196.1 243 48.1
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 7.3e-48 194.9 208 52.4
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 1.2e-47 194.1 189 51.9
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 1.6e-47 193.7 215 49.8
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 2.1e-47 193.4 208 51.0
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 2.8e-47 193.0 206 51.0
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 6.2e-47 191.8 184 55.4
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 8.1e-47 191.4 239 48.1
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 1.1e-46 191.0 197 53.8
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.4e-46 190.7 249 48.6
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.8e-46 190.3 221 49.3
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 6.8e-46 188.3 296 43.2
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 8.9e-46 188.0 205 53.7
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 1.2e-45 187.6 215 49.8
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 2.0e-45 186.8 229 48.9
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 3.4e-45 186.0 165 60.0
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 4.4e-45 185.7 229 48.5
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 4.4e-45 185.7 250 47.2
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 2.2e-44 183.3 216 51.4
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 6.4e-44 181.8 245 42.4
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 5.4e-43 178.7 184 57.1
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 5.4e-43 178.7 227 50.7
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 1.2e-42 177.6 213 46.0
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 2.1e-42 176.8 161 58.4
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 2.1e-42 176.8 169 55.6
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 3.5e-42 176.0 203 51.7
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 6.0e-42 175.3 228 46.9
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 6.0e-42 175.3 255 45.5
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 6.0e-42 175.3 145 64.1
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 6.0e-42 175.3 145 64.1
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.7e-41 173.7 251 45.8
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 5.1e-41 172.2 286 39.5
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 9.6e-40 167.9 156 57.7
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 2.1e-39 166.8 191 50.3
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 3.6e-39 166.0 188 51.6
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 3.6e-39 166.0 215 45.1
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 1.1e-38 164.5 188 50.5
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.1e-38 164.5 190 53.7
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 1.4e-38 164.1 245 45.3
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 3.1e-38 162.9 203 45.8
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 4.0e-38 162.5 207 44.9
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 4.0e-38 162.5 191 50.3
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 4.0e-38 162.5 191 50.3
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 4.0e-38 162.5 153 55.6
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 9.0e-38 161.4 192 50.0
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 9.0e-38 161.4 165 57.0
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.2e-37 161.0 148 54.1
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 1.5e-37 160.6 192 50.0
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 2.0e-37 160.2 169 53.3
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 2.6e-37 159.8 167 58.7
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 2.6e-37 159.8 236 44.5
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 4.4e-37 159.1 165 53.3
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 4.4e-37 159.1 248 43.5
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 4.4e-37 159.1 245 44.9
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 9.9e-37 157.9 215 43.3
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.3e-36 157.5 189 50.8
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 2.2e-36 156.8 192 46.9
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 3.5e-34 149.4 185 47.0
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 4.6e-34 149.1 227 41.4
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 2.8e-31 139.8 206 39.3
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 7.6e-29 131.7 76 75.0
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.2e-28 130.2 255 40.4
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 4.9e-28 129.0 143 49.7
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 3.2e-27 126.3 118 50.0
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 5.5e-27 125.6 127 48.8
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 2.7e-26 123.2 144 54.2
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 2.3e-25 120.2 130 48.5
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 2.3e-25 120.2 165 44.2
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 3.9e-25 119.4 126 51.6
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 3.1e-22 109.8 89 61.8
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 5.3e-22 109.0 168 41.1
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.8e-20 102.8 100 54.0
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 6.0e-18 95.5 103 54.4
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 5.1e-17 92.4 114 47.4
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 1.9e-16 90.5 245 36.3
PSO675G1839 Papaver somniferum HOM05D000047 ORTHO05D000044 4.8e-07 59.3 70 52.9


User provided reference genes

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