Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4029 Papaver somniferum HOM05D007083 ORTHO05D008801 1.6e-118 431.0 217 100.0
PSO384G4964 Papaver somniferum HOM05D007083 ORTHO05D008801 1.2e-99 368.2 215 87.0
TAR369G0752 Trochodendron aralioides HOM05D007083 ORTHO05D008801 1.1e-31 142.5 229 40.2
Nn7g35939 Nelumbo nucifera HOM05D007083 ORTHO05D008801 3.0e-29 134.4 227 39.6
Aqoxy7G03503 Aquilegia oxysepala HOM05D007083 ORTHO05D008801 9.7e-28 129.4 207 39.1
CSS0008892 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 1.7e-27 128.6 204 39.7
CSS0024065 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 1.7e-27 128.6 204 39.7
CiPaw.06G139300 Carya illinoinensis HOM05D007083 ORTHO05D008801 2.2e-27 128.3 221 35.7
Prupe.8G019300 Prunus persica HOM05D007083 ORTHO05D008801 2.8e-27 127.9 216 35.2
Dinv23578 Davidia involucrata HOM05D007083 ORTHO05D008801 8.3e-27 126.3 203 37.4
Nitab4.5_0001401g0200 Nicotiana tabacum HOM05D007083 ORTHO05D008801 7.0e-26 123.2 163 42.9
QL11p039208 Quercus lobata HOM05D007083 ORTHO05D008801 1.6e-25 122.1 214 36.4
MSTRG.5378 Avicennia marina HOM05D007083 ORTHO05D008801 2.7e-25 121.3 163 41.1
Manes.15G145600 Manihot esculenta HOM05D007083 ORTHO05D008801 3.5e-25 120.9 186 36.0
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 3.5e-25 120.9 167 40.1
PGSC0003DMG400025930 Solanum tuberosum HOM05D007083 ORTHO05D008801 7.7e-25 119.8 167 40.1
Gohir.D12G042300 Gossypium hirsutum HOM05D007083 ORTHO05D008801 1.3e-24 119.0 203 35.5
Rhsim05G0078900 Rhododendron simsii HOM05D007083 ORTHO05D008801 1.3e-24 119.0 210 34.3
ATR0598G052 Amborella trichopoda HOM05D007083 ORTHO05D008801 1.7e-24 118.6 186 34.9
Solyc01g109060.4 Solanum lycopersicum HOM05D007083 ORTHO05D008801 2.2e-24 118.2 167 40.1
Gorai.008G044300 Gossypium raimondii HOM05D007083 ORTHO05D008801 2.9e-24 117.9 203 34.5
GSVIVG01029769001 Vitis vinifera HOM05D007083 ORTHO05D008801 2.9e-24 117.9 200 36.5
MBI19_g17433_MAGBIO Magnolia biondii HOM05D007083 ORTHO05D008801 6.5e-24 116.7 165 40.0
Lj2P412T37 Lonicera japonica HOM05D007083 ORTHO05D008801 8.5e-24 116.3 211 37.4
Cpa.g.sc109.26 Carica papaya HOM05D007083 ORTHO05D008801 3.2e-23 114.4 167 38.9
Haze_02465 Corylus avellana HOM05D007083 ORTHO05D008801 3.2e-23 114.4 159 40.3
Cfa004946 Carpinus fangiana HOM05D007083 ORTHO05D008801 4.2e-23 114.0 163 39.3
CAN.G322.86 Capsicum annuum HOM05D007083 ORTHO05D008801 7.2e-23 113.2 164 39.6
Gohir.A12G030100 Gossypium hirsutum HOM05D007083 ORTHO05D008801 7.2e-23 113.2 203 34.5
Sc18g0004780 Simmondsia chinensis HOM05D007083 ORTHO05D008801 9.4e-23 112.8 184 34.8
TWI31G0787 Tripterygium wilfordii HOM05D007083 ORTHO05D008801 9.4e-23 112.8 176 38.1
Phvul.001G085800 Phaseolus vulgaris HOM05D007083 ORTHO05D008801 8.0e-22 109.8 165 35.8
Duzib052G0394 Durio zibethinus HOM05D007083 ORTHO05D008801 1.0e-21 109.4 226 31.4
EL10Ac9g21792 Beta vulgaris HOM05D007083 ORTHO05D008801 1.8e-21 108.6 165 37.6
CANSAT25G2501 Cannabis sativa HOM05D007083 ORTHO05D008801 4.0e-21 107.5 221 33.0
Thecc.02G028500 Theobroma cacao HOM05D007083 ORTHO05D008801 6.8e-21 106.7 220 33.2
CsaV3_7G010110 Cucumis sativus L. HOM05D007083 ORTHO05D008801 1.2e-20 105.9 156 38.5
DCAR_003627 Daucus carota HOM05D007083 ORTHO05D008801 1.2e-20 105.9 163 36.8
Sabra18G0050700 Salix brachista HOM05D007083 ORTHO05D008801 1.5e-20 105.5 194 32.5
Ciclev10030406m.g Citrus clementina HOM05D007083 ORTHO05D008801 2.0e-20 105.1 210 32.9
Glyma.12G048300 Glycine max HOM05D007083 ORTHO05D008801 2.0e-20 105.1 164 33.5
HanXRQChr12g0374971 Helianthus annuus HOM05D007083 ORTHO05D008801 2.0e-20 105.1 169 36.1
PGR042G0769 Punica granatum HOM05D007083 ORTHO05D008801 2.6e-20 104.8 165 37.0
VMungo1383G2401 Vigna mungo HOM05D007083 ORTHO05D008801 3.4e-20 104.4 163 35.0
AUR62011398 Chenopodium quinoa HOM05D007083 ORTHO05D008801 4.4e-20 104.0 192 34.9
Sc18g0004860 Simmondsia chinensis HOM05D007083 ORTHO05D008801 4.4e-20 104.0 167 34.1
Ah.01g019870 Amaranthus hybridus HOM05D007083 ORTHO05D008801 7.5e-20 103.2 163 38.0
MELO3C018417.2 Cucumis melo HOM05D007083 ORTHO05D008801 7.5e-20 103.2 182 36.3
Potri.004G147700 Populus trichocarpa HOM05D007083 ORTHO05D008801 7.5e-20 103.2 194 32.5
Aa31LG8G13290 Aethionema arabicum HOM05D007083 ORTHO05D008801 1.7e-19 102.1 172 32.6
Atru.chr5.2875 Acer truncatum HOM05D007083 ORTHO05D008801 2.2e-19 101.7 147 38.1
Atru.chr13.1400 Acer truncatum HOM05D007083 ORTHO05D008801 2.8e-19 101.3 202 34.7
A07p05120 Brassica napus HOM05D007083 ORTHO05D008801 3.7e-19 100.9 183 30.6
arahy.Tifrunner.gnm1.ann1.JD2ZC9 Arachis hypogaea HOM05D007083 ORTHO05D008801 1.1e-18 99.4 190 35.3
C07p08180 Brassica napus HOM05D007083 ORTHO05D008801 1.1e-18 99.4 183 30.6
BraA07t28306Z Brassica rapa HOM05D007083 ORTHO05D008801 1.4e-18 99.0 183 30.1
CARHR106000 Cardamine hirsuta HOM05D007083 ORTHO05D008801 1.8e-18 98.6 165 30.3
BcaC06g36074 Brassica carinata HOM05D007083 ORTHO05D008801 2.4e-18 98.2 183 30.1
BolC7t41234H Brassica oleracea HOM05D007083 ORTHO05D008801 2.4e-18 98.2 183 30.1
AUR62016660 Chenopodium quinoa HOM05D007083 ORTHO05D008801 2.4e-18 98.2 163 36.8
Sed0019239 Sechium edule HOM05D007083 ORTHO05D008801 2.4e-18 98.2 153 37.9
Cc02_g18190 Coffea canephora HOM05D007083 ORTHO05D008801 3.1e-18 97.8 157 35.0
Lj3g0002320 Lotus japonicus HOM05D007083 ORTHO05D008801 2.7e-17 94.7 162 35.2
AL3G47400 Arabidopsis lyrata HOM05D007083 ORTHO05D008801 3.5e-17 94.4 186 29.6
Eucgr.J00091 Eucalyptus grandis HOM05D007083 ORTHO05D008801 7.7e-17 93.2 160 33.1
SHI08173 Sapria himalayana HOM05D007083 ORTHO05D008801 1.0e-16 92.8 151 35.1
AT2G15630 Arabidopsis thaliana HOM05D007083 ORTHO05D008801 2.3e-16 91.7 168 28.0
SalBow3G3241 Salvia bowleyana HOM05D001193 ORTHO05D001016 2.3e-16 91.7 179 32.4
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 2.9e-16 91.3 171 28.7
HPP92_019625 Vanilla planifolia HOM05D007083 ORTHO05D008801 2.9e-16 91.3 212 31.1
RcHm_v2.0_Chr6g0259961 Rosa chinensis HOM05D007083 ORTHO05D008801 3.8e-16 90.9 161 31.7
THA.LOC104819595 Tarenaya hassleriana HOM05D007083 ORTHO05D008801 5.0e-16 90.5 154 34.4
FAN20G1975 Fragaria x ananassa HOM05D007083 ORTHO05D008801 8.6e-16 89.7 188 32.4
FvH4_2g07360 Fragaria vesca HOM05D007083 ORTHO05D008801 1.5e-15 89.0 187 31.0
ECA236G1626 Erigeron canadensis HOM05D007083 ORTHO05D008801 3.3e-15 87.8 163 33.1
Medtr4g068360 Medicago truncatula HOM05D007083 ORTHO05D008801 3.3e-15 87.8 161 34.2
BcaB03g14591 Brassica carinata HOM05D007083 ORTHO05D008801 7.2e-15 86.7 185 28.6
FAN24G0977 Fragaria x ananassa HOM05D007083 ORTHO05D008801 9.5e-15 86.3 160 32.5
Potri.009G109001 Populus trichocarpa HOM05D007083 ORTHO05D008801 9.5e-15 86.3 155 29.0
arahy.Tifrunner.gnm1.ann1.CNDX61 Arachis hypogaea HOM05D007083 ORTHO05D008801 1.2e-14 85.9 169 33.1
ClCG02G005520 Citrullus lanatus HOM05D007083 ORTHO05D008801 2.8e-14 84.7 190 31.1
Sabra04G0098000 Salix brachista HOM05D007083 ORTHO05D008801 6.1e-14 83.6 132 31.8
QL11p039212 Quercus lobata HOM05D007083 ORTHO05D008801 8.0e-14 83.2 214 30.8
Glyma.11G123700 Glycine max HOM05D007083 ORTHO05D008801 2.3e-13 81.6 185 30.3
Thhalv10022592m.g Eutrema salsugineum HOM05D007083 ORTHO05D008801 8.9e-13 79.7 171 24.6
Actinidia17838 Actinidia chinensis HOM05D007083 ORTHO05D008801 8.3e-11 73.2 202 29.2
Migut.N01212 Erythranthe guttata HOM05D007083 ORTHO05D008801 1.4e-10 72.4 162 33.3
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 6.6e-08 63.5 165 29.7
SEGI_31001 Sequoiadendron giganteum HOM05D007358 ORTHO05D009117 6.6e-08 63.5 167 31.1
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 8.6e-08 63.2 169 24.9
COL.COLO4_17774 Corchorus olitorius HOM05D007083 ORTHO05D008801 1.1e-07 62.8 163 30.1
TPR.G10240 Trifolium pratense HOM05D007083 ORTHO05D008801 1.5e-07 62.4 65 43.1
AUR62034761 Chenopodium quinoa HOM05D005764 ORTHO05D006600 4.3e-07 60.8 169 28.4
AUR62041690 Chenopodium quinoa HOM05D005764 ORTHO05D006600 4.3e-07 60.8 169 28.4
AUR62009526 Chenopodium quinoa HOM05D005764 ORTHO05D006600 7.3e-07 60.1 168 28.6
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 7.3e-07 60.1 166 27.1
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 7.3e-07 60.1 166 27.1
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 1.2e-06 59.3 174 25.9
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 1.2e-06 59.3 166 30.1
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 1.6e-06 58.9 106 29.2
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 1.6e-06 58.9 183 25.7
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.1e-06 58.5 165 27.9
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 2.1e-06 58.5 106 29.2
SEGI_00853 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.8e-06 58.2 213 25.8
FAN23G0930 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.7e-06 57.4 166 26.5
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 6.1e-06 57.0 101 30.7
DCAR_019687 Daucus carota HOM05D006931 ORTHO05D008782 6.1e-06 57.0 156 27.6
Aqoxy5G01741 Aquilegia oxysepala HOM05D007675 ORTHO05D009699 8.0e-06 56.6 208 26.9


User provided reference genes

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