Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3796 Papaver somniferum HOM05D004074 ORTHO05D004717 3.0e-37 157.9 76 100.0
PSO170G4934 Papaver somniferum HOM05D004074 ORTHO05D004717 2.6e-36 154.8 76 98.7
Hund14448 Selenicereus undatus HOM05D004074 ORTHO05D004717 4.9e-27 124.0 67 82.1
Actinidia00635 Actinidia chinensis HOM05D004074 ORTHO05D004717 1.4e-26 122.5 68 80.9
Actinidia25993 Actinidia chinensis HOM05D004074 ORTHO05D004717 1.4e-26 122.5 68 80.9
Dinv20359 Davidia involucrata HOM05D004074 ORTHO05D004717 1.4e-26 122.5 70 78.6
Actinidia31138 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.4e-26 121.7 70 78.6
Solyc06g063220.3 Solanum lycopersicum HOM05D004074 ORTHO05D004717 3.2e-26 121.3 73 74.0
Sopen06g022670 Solanum pennellii HOM05D004074 ORTHO05D004717 3.2e-26 121.3 68 77.9
RcHm_v2.0_Chr2g0150171 Rosa chinensis HOM05D004074 ORTHO05D004717 7.0e-26 120.2 68 77.9
unitig_748.g7476 Utricularia gibba HOM05D004074 ORTHO05D004717 7.0e-26 120.2 67 82.1
CARHR041810 Cardamine hirsuta HOM05D004074 ORTHO05D004717 9.2e-26 119.8 70 77.1
ClCG09G001480 Citrullus lanatus HOM05D004074 ORTHO05D004717 9.2e-26 119.8 70 78.6
Gohir.D12G001400 Gossypium hirsutum HOM05D004074 ORTHO05D004717 9.2e-26 119.8 68 77.9
Nn6g31693 Nelumbo nucifera HOM05D004074 ORTHO05D004717 9.2e-26 119.8 74 77.0
Nn8g40291 Nelumbo nucifera HOM05D004074 ORTHO05D004717 9.2e-26 119.8 74 77.0
Hund11291 Selenicereus undatus HOM05D004074 ORTHO05D004717 9.2e-26 119.8 69 79.7
TWI77G0047 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 9.2e-26 119.8 70 78.6
Nn5g30428 Nelumbo nucifera HOM05D004074 ORTHO05D004717 1.2e-25 119.4 74 77.0
TPR.G2285 Trifolium pratense HOM05D004074 ORTHO05D004717 1.2e-25 119.4 65 81.5
unitig_32.g11555 Utricularia gibba HOM05D004074 ORTHO05D004717 1.2e-25 119.4 68 79.4
Actinidia38792 Actinidia chinensis HOM05D004074 ORTHO05D004717 1.6e-25 119.0 68 79.4
CiPaw.01G088100 Carya illinoinensis HOM05D004074 ORTHO05D004717 1.6e-25 119.0 68 79.4
Duzib187G1118 Durio zibethinus HOM05D004074 ORTHO05D004717 1.6e-25 119.0 68 76.5
Gohir.D11G059000 Gossypium hirsutum HOM05D004074 ORTHO05D004717 1.6e-25 119.0 68 76.5
Gorai.007G063900 Gossypium raimondii HOM05D004074 ORTHO05D004717 1.6e-25 119.0 68 76.5
HanXRQChr10g0311531 Helianthus annuus HOM05D004074 ORTHO05D004717 1.6e-25 119.0 68 77.9
PGSC0003DMG402009187 Solanum tuberosum HOM05D004074 ORTHO05D004717 1.6e-25 119.0 68 76.5
Duzib264G1024 Durio zibethinus HOM05D004074 ORTHO05D004717 2.0e-25 118.6 68 77.9
Gorai.008G000800 Gossypium raimondii HOM05D004074 ORTHO05D004717 2.0e-25 118.6 68 76.5
HanXRQChr12g0359921 Helianthus annuus HOM05D004074 ORTHO05D004717 2.0e-25 118.6 68 76.5
Manes.05G195000 Manihot esculenta HOM05D004074 ORTHO05D004717 2.0e-25 118.6 70 78.6
Psat7g263760 Pisum sativum HOM05D004074 ORTHO05D004717 2.0e-25 118.6 66 78.8
Sed0005809 Sechium edule HOM05D004074 ORTHO05D004717 2.0e-25 118.6 70 75.7
Psat1g059640 Pisum sativum HOM05D004074 ORTHO05D004717 2.7e-25 118.2 65 81.5
CsaV3_7G033840 Cucumis sativus L. HOM05D004074 ORTHO05D004717 3.5e-25 117.9 70 77.1
Gohir.A11G055200 Gossypium hirsutum HOM05D004074 ORTHO05D004717 3.5e-25 117.9 67 76.1
Hma1.2p1_0039F.1_g024790 Hydrangea macrophylla HOM05D004074 ORTHO05D004717 3.5e-25 117.9 70 75.7
AT1G51650 Arabidopsis thaliana HOM05D004074 ORTHO05D004717 4.6e-25 117.5 70 74.3
Cc01_g08930 Coffea canephora HOM05D004074 ORTHO05D004717 4.6e-25 117.5 68 77.9
Gohir.A12G001600 Gossypium hirsutum HOM05D004074 ORTHO05D004717 4.6e-25 117.5 68 75.0
PGSC0003DMG400028842 Solanum tuberosum HOM05D004074 ORTHO05D004717 4.6e-25 117.5 68 75.0
TWI53G1078 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 4.6e-25 117.5 70 75.7
ECA234G0987 Erigeron canadensis HOM05D004074 ORTHO05D004717 6.0e-25 117.1 68 76.5
AL1G59560 Arabidopsis lyrata HOM05D004074 ORTHO05D004717 7.8e-25 116.7 68 75.0
MELO3C024297.2 Cucumis melo HOM05D004074 ORTHO05D004717 7.8e-25 116.7 70 75.7
Dinv37799 Davidia involucrata HOM05D004074 ORTHO05D004717 7.8e-25 116.7 65 78.5
MD09G1158500 Malus domestica HOM05D004074 ORTHO05D004717 7.8e-25 116.7 70 72.9
Sopen12g024230 Solanum pennellii HOM05D004074 ORTHO05D004717 7.8e-25 116.7 68 73.5
CSS0037999 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.0e-24 116.3 68 76.5
CSS0039874 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.0e-24 116.3 68 76.5
A08p02600 Brassica napus HOM05D004074 ORTHO05D004717 1.3e-24 115.9 65 78.5
BraA08t32299Z Brassica rapa HOM05D004074 ORTHO05D004717 1.3e-24 115.9 65 78.5
Carub.0001s4049 Capsella rubella HOM05D004074 ORTHO05D004717 1.3e-24 115.9 65 80.0
Actinidia21867 Actinidia chinensis HOM05D004074 ORTHO05D004717 1.7e-24 115.5 68 75.0
CARHR097100 Cardamine hirsuta HOM05D004074 ORTHO05D004717 1.7e-24 115.5 70 72.9
Duzib147G0570 Durio zibethinus HOM05D004074 ORTHO05D004717 1.7e-24 115.5 68 73.5
FvH4_6g37330 Fragaria vesca HOM05D004074 ORTHO05D004717 1.7e-24 115.5 68 73.5
Solyc12g055760.2 Solanum lycopersicum HOM05D004074 ORTHO05D004717 1.7e-24 115.5 68 72.1
Aqoxy7G03184 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 3.0e-24 114.8 65 80.0
CDE02G0689 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 3.0e-24 114.8 68 77.9
TAR626G1506 Trochodendron aralioides HOM05D004074 ORTHO05D004717 3.0e-24 114.8 66 81.8
BcaB04g17185 Brassica carinata HOM05D004074 ORTHO05D004717 3.9e-24 114.4 65 78.5
Medtr5g040610 Medicago truncatula HOM05D004074 ORTHO05D004717 3.9e-24 114.4 65 76.9
Nitab4.5_0007548g0020 Nicotiana tabacum HOM05D004074 ORTHO05D004717 3.9e-24 114.4 68 75.0
PGSC0003DMG400026508 Solanum tuberosum HOM05D004074 ORTHO05D004717 3.9e-24 114.4 68 73.5
A05p19470 Brassica napus HOM05D004074 ORTHO05D004717 5.0e-24 114.0 65 80.0
BraA05t20851Z Brassica rapa HOM05D004074 ORTHO05D004717 5.0e-24 114.0 65 80.0
CANSAT01G1956 Cannabis sativa HOM05D004074 ORTHO05D004717 5.0e-24 114.0 68 76.5
FAN02G0872 Fragaria x ananassa HOM05D004074 ORTHO05D004717 5.0e-24 114.0 68 72.1
FAN05G0051 Fragaria x ananassa HOM05D004074 ORTHO05D004717 5.0e-24 114.0 68 72.1
FAN09G3199 Fragaria x ananassa HOM05D004074 ORTHO05D004717 5.0e-24 114.0 68 72.1
Lj3g0011227 Lotus japonicus HOM05D004074 ORTHO05D004717 5.0e-24 114.0 61 80.3
Sp1g38290 Schrenkiella parvula HOM05D004074 ORTHO05D004717 5.0e-24 114.0 65 78.5
BcaB04g19151 Brassica carinata HOM05D004074 ORTHO05D004717 6.6e-24 113.6 70 71.4
BcaC01g03518 Brassica carinata HOM05D004074 ORTHO05D004717 6.6e-24 113.6 70 71.4
CDE05G2863 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 6.6e-24 113.6 68 76.5
Phvul.008G255900 Phaseolus vulgaris HOM05D004074 ORTHO05D004717 6.6e-24 113.6 65 76.9
PGR102G2231 Punica granatum HOM05D004074 ORTHO05D004717 6.6e-24 113.6 68 73.5
Haze_03743 Corylus avellana HOM05D004074 ORTHO05D004717 8.6e-24 113.2 66 75.8
vmacro18761 Vaccinium macrocarpon HOM05D004074 ORTHO05D004717 8.6e-24 113.2 62 80.6
Aa31LG10G3130 Aethionema arabicum HOM05D004074 ORTHO05D004717 1.1e-23 112.8 68 75.0
Sp3g19200 Schrenkiella parvula HOM05D004074 ORTHO05D004717 1.1e-23 112.8 70 72.9
BraA01t03480Z Brassica rapa HOM05D004074 ORTHO05D004717 1.5e-23 112.5 68 72.1
Prupe.3G167500 Prunus persica HOM05D004074 ORTHO05D004717 1.5e-23 112.5 65 73.8
Aqoxy5G02869 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 1.9e-23 112.1 61 80.3
BcaB04g20604 Brassica carinata HOM05D004074 ORTHO05D004717 1.9e-23 112.1 70 71.4
BcaNung05296 Brassica carinata HOM05D004074 ORTHO05D004717 1.9e-23 112.1 70 71.4
BolC1t04251H Brassica oleracea HOM05D004074 ORTHO05D004717 1.9e-23 112.1 70 71.4
Aa31LG8G7900 Aethionema arabicum HOM05D004074 ORTHO05D004717 2.5e-23 111.7 64 76.6
BcaB02g11264 Brassica carinata HOM05D004074 ORTHO05D004717 2.5e-23 111.7 65 78.5
Thhalv10011901m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 2.5e-23 111.7 65 76.9
A01p33680 Brassica napus HOM05D004074 ORTHO05D004717 3.3e-23 111.3 68 72.1
Migut.I01175 Erythranthe guttata HOM05D004074 ORTHO05D004717 3.3e-23 111.3 68 72.1
BcaC08g43926 Brassica carinata HOM05D004074 ORTHO05D004717 4.3e-23 110.9 65 78.5
C01p43050 Brassica napus HOM05D004074 ORTHO05D004717 4.3e-23 110.9 70 70.0
C06p13180 Brassica napus HOM05D004074 ORTHO05D004717 4.3e-23 110.9 65 78.5
BolC6t36474H Brassica oleracea HOM05D004074 ORTHO05D004717 4.3e-23 110.9 65 78.5
Lsat_1_v5_gn_4_88780 Lactuca sativa HOM05D004074 ORTHO05D004717 4.3e-23 110.9 64 76.6
Rhsim06G0076700 Rhododendron simsii HOM05D004074 ORTHO05D004717 4.3e-23 110.9 62 79.0
TAR383G0992 Trochodendron aralioides HOM05D004074 ORTHO05D004717 5.6e-23 110.5 66 78.8
DCAR_007668 Daucus carota HOM05D004074 ORTHO05D004717 7.3e-23 110.2 65 70.8
Cpa.g.sc1009.1 Carica papaya HOM05D004074 ORTHO05D004717 9.5e-23 109.8 60 81.7
Glyma.07G003700 Glycine max HOM05D004074 ORTHO05D004717 9.5e-23 109.8 68 70.6
THA.LOC104821596 Tarenaya hassleriana HOM05D004074 ORTHO05D004717 9.5e-23 109.8 68 69.1
Thecc.01G124200 Theobroma cacao HOM05D004074 ORTHO05D004717 9.5e-23 109.8 60 80.0
HPP92_021730 Vanilla planifolia HOM05D004074 ORTHO05D004717 1.2e-22 109.4 67 73.1
QL05p083316 Quercus lobata HOM05D004074 ORTHO05D004717 1.6e-22 109.0 65 73.8
ATR0580G305 Amborella trichopoda HOM05D004074 ORTHO05D004717 2.1e-22 108.6 65 73.8
COL.COLO4_13992 Corchorus olitorius HOM05D004074 ORTHO05D004717 2.1e-22 108.6 61 77.0
Nitab4.5_0008628g0040 Nicotiana tabacum HOM05D004074 ORTHO05D004717 2.1e-22 108.6 63 74.6
Rhsim08G0247900 Rhododendron simsii HOM05D004074 ORTHO05D004717 2.1e-22 108.6 60 80.0
Eucgr.F04009 Eucalyptus grandis HOM05D004074 ORTHO05D004717 2.8e-22 108.2 63 74.6
Oeu040350.2 Olea europaea HOM05D004074 ORTHO05D004717 3.6e-22 107.8 62 77.4
FAN14G4331 Fragaria x ananassa HOM05D004074 ORTHO05D004717 4.7e-22 107.5 60 76.7
Os08g0250200 Oryza sativa ssp. japonica HOM05D004074 ORTHO05D004717 4.7e-22 107.5 66 69.7
Ciclev10026787m.g Citrus clementina HOM05D004074 ORTHO05D004717 6.2e-22 107.1 61 75.4
Nitab4.5_0002661g0050 Nicotiana tabacum HOM05D004074 ORTHO05D004717 6.2e-22 107.1 60 78.3
Peaxi162Scf00038g02442 Petunia axillaris HOM05D004074 ORTHO05D004717 6.2e-22 107.1 61 73.8
VMungo0647G0339 Vigna mungo HOM05D001270 ORTHO05D001099 6.2e-22 107.1 61 78.7
Nitab4.5_0002885g0120 Nicotiana tabacum HOM05D004074 ORTHO05D004717 8.1e-22 106.7 63 71.4
Potri.010G250000 Populus trichocarpa HOM05D004074 ORTHO05D004717 8.1e-22 106.7 65 72.3
CAN.G1073.1 Capsicum annuum HOM05D004074 ORTHO05D004717 1.1e-21 106.3 61 73.8
Potri.008G008900 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.1e-21 106.3 65 72.3
MBI04_g18036_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 1.4e-21 105.9 67 73.1
Nitab4.5_0000357g0290 Nicotiana tabacum HOM05D004074 ORTHO05D004717 1.4e-21 105.9 60 76.7
Zm00001eb161770 Zea mays HOM05D004074 ORTHO05D004717 1.4e-21 105.9 69 68.1
CAN.G790.25 Capsicum annuum HOM05D004074 ORTHO05D004717 2.3e-21 105.1 61 73.8
Lalb_Chr25g0278611 Lupinus albus HOM05D004074 ORTHO05D004717 2.3e-21 105.1 61 72.1
BolC3t17439H Brassica oleracea HOM05D000606 ORTHO05D001265 3.1e-21 104.8 60 75.0
BraA03t13364Z Brassica rapa HOM05D000606 ORTHO05D001265 3.1e-21 104.8 60 75.0
Zm00001eb357940 Zea mays HOM05D004074 ORTHO05D004717 3.1e-21 104.8 66 69.7
Nitab4.5_0001691g0090 Nicotiana tabacum HOM05D004074 ORTHO05D004717 4.0e-21 104.4 60 73.3
arahy.Tifrunner.gnm1.ann1.9ZAP4M Arachis hypogaea HOM05D004074 ORTHO05D004717 6.8e-21 103.6 62 71.0
Glyma.08G222900 Glycine max HOM05D004074 ORTHO05D004717 6.8e-21 103.6 62 72.6
Ah.07g199420 Amaranthus hybridus HOM05D004074 ORTHO05D004717 8.9e-21 103.2 58 77.6
Thhalv10021996m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 8.9e-21 103.2 66 68.2
QL05p083267 Quercus lobata HOM05D004074 ORTHO05D004717 8.9e-21 103.2 63 68.3
EL10Ac5g12205 Beta vulgaris HOM05D004074 ORTHO05D004717 3.4e-20 101.3 60 75.0
BolC8t49078H Brassica oleracea HOM05D004074 ORTHO05D004717 4.4e-20 100.9 60 71.7
SHI21232 Sapria himalayana HOM05D004074 ORTHO05D004717 5.8e-20 100.5 61 73.8
SGA_v2.0_scaffold122G33290 Striga asiatica HOM05D004074 ORTHO05D004717 5.8e-20 100.5 59 74.6
Sabra08G0005100 Salix brachista HOM05D004074 ORTHO05D004717 1.7e-19 99.0 66 66.7
Sabra10G0194600 Salix brachista HOM05D004074 ORTHO05D004717 1.7e-19 99.0 60 73.3
BcaC09g49057 Brassica carinata HOM05D004074 ORTHO05D004717 2.2e-19 98.6 60 70.0
AUR62018789 Chenopodium quinoa HOM05D004074 ORTHO05D004717 2.2e-19 98.6 58 75.9
C06p25410 Brassica napus HOM05D004074 ORTHO05D004717 2.9e-19 98.2 64 64.1
BolC6t37702H Brassica oleracea HOM05D004074 ORTHO05D004717 2.9e-19 98.2 64 64.1
SGA_v2.0_scaffold71G24013 Striga asiatica HOM05D001270 ORTHO05D001099 2.9e-19 98.2 59 72.9
BcaC08g44915 Brassica carinata HOM05D004074 ORTHO05D004717 3.7e-19 97.8 61 65.6
SEGI_28642 Sequoiadendron giganteum HOM05D004074 ORTHO05D004717 3.7e-19 97.8 69 62.3
BcaC03g13642 Brassica carinata HOM05D000239 ORTHO05D004717 8.3e-19 96.7 65 64.6
PSO455G0136 Papaver somniferum HOM05D004074 ORTHO05D004717 1.1e-18 96.3 66 75.8
C02p10320 Brassica napus HOM05D004074 ORTHO05D004717 1.4e-18 95.9 64 65.6
HPP92_021648 Vanilla planifolia HOM05D004074 ORTHO05D004717 9.2e-18 93.2 66 66.7
GSVIVG01037184001 Vitis vinifera HOM05D004074 ORTHO05D004717 2.7e-17 91.7 57 70.2
SalBow6G5392 Salvia bowleyana HOM05D004074 ORTHO05D004717 6.6e-16 87.0 48 79.2
MBI14_g24286_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 4.3e-15 84.3 47 74.5
GSVIVG01037963001 Vitis vinifera HOM05D004074 ORTHO05D004717 4.3e-15 84.3 46 78.3
AagrBONN_evm.TU.Sc2ySwM_117.3571 Anthoceros agrestis HOM05D004074 ORTHO05D004717 1.2e-14 82.8 65 53.8
Lsat_1_v5_gn_5_137500 Lactuca sativa HOM05D001270 ORTHO05D001099 1.6e-14 82.4 56 67.9
Pp3c1_12120 Physcomitrium patens HOM05D004074 ORTHO05D004717 3.6e-14 81.3 74 51.4
Pp3c2_24870 Physcomitrium patens HOM05D004074 ORTHO05D004717 4.7e-14 80.9 72 47.2
AagrBONN_evm.TU.Sc2ySwM_344.1495 Anthoceros agrestis HOM05D004074 ORTHO05D004717 6.2e-14 80.5 65 52.3
Mapoly0001s0230 Marchantia polymorpha HOM05D004074 ORTHO05D004717 6.2e-14 80.5 76 47.4
Thhalv10022333m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 2.0e-12 75.5 65 55.4
C02p45000 Brassica napus HOM05D000128 ORTHO05D000059 5.8e-12 73.9 44 72.7
SMO351G0623 Selaginella moellendorffii HOM05D004074 ORTHO05D004717 1.3e-11 72.8 56 50.0
MCO11G253 Micromonas commoda HOM05D004074 ORTHO05D004717 3.8e-11 71.2 63 47.6
Pp3c1_10140 Physcomitrium patens HOM05D004074 ORTHO05D004717 1.9e-10 68.9 52 55.8
PRCOL_00000946 Prasinoderma coloniale HOM05D004074 ORTHO05D004717 3.2e-10 68.2 55 52.7
Medtr4g005960 Medicago truncatula HOM05D004074 ORTHO05D004717 4.1e-10 67.8 63 46.0
Zm00001eb394860 Zea mays HOM05D004074 ORTHO05D004717 9.2e-10 66.6 52 53.8
Cre10.g420700 Chlamydomonas reinhardtii HOM05D004074 ORTHO05D004717 3.3e-07 58.2 56 44.6


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