Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3782 Papaver somniferum HOM05D002861 ORTHO05D003104 9.3e-164 580.1 283 100.0
PSO339G4235 Papaver somniferum HOM05D002861 ORTHO05D003104 2.5e-145 518.8 300 87.3
PSO384G2176 Papaver somniferum HOM05D002861 ORTHO05D003104 4.1e-95 352.1 299 63.2
PSO339G3436 Papaver somniferum HOM05D002861 ORTHO05D003104 2.0e-86 323.2 205 79.0
PSO339G0597 Papaver somniferum HOM05D002861 ORTHO05D003104 1.6e-67 260.4 272 52.6
PSO384G4571 Papaver somniferum HOM05D002861 ORTHO05D003104 1.1e-60 237.7 313 49.2
PSO339G1435 Papaver somniferum HOM05D002861 ORTHO05D003104 1.0e-53 214.5 292 43.8
PSO384G4862 Papaver somniferum HOM05D002861 ORTHO05D003104 1.6e-51 207.2 291 43.3
TAR633G0661 Trochodendron aralioides HOM05D002861 ORTHO05D003104 5.4e-47 192.2 302 42.1
Nn1g07961 Nelumbo nucifera HOM05D002861 ORTHO05D003104 1.1e-44 184.5 280 43.6
TAR633G1221 Trochodendron aralioides HOM05D002861 ORTHO05D003104 1.1e-44 184.5 305 41.0
Hma1.2p1_0123F.1_g057930 Hydrangea macrophylla HOM05D002861 ORTHO05D003104 8.1e-43 178.3 309 38.5
Actinidia38916 Actinidia chinensis HOM05D002861 ORTHO05D003104 6.9e-42 175.3 304 38.5
Hma1.2p1_0123F.1_g057920 Hydrangea macrophylla HOM05D002861 ORTHO05D003104 3.4e-41 172.9 290 38.6
TWI60G1199 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 5.8e-41 172.2 298 36.9
GSVIVG01026376001 Vitis vinifera HOM05D002861 ORTHO05D003104 1.3e-40 171.0 306 37.3
Prupe.6G355800 Prunus persica HOM05D002861 ORTHO05D003104 8.4e-40 168.3 299 35.8
PSO339G2371 Papaver somniferum HOM05D002861 ORTHO05D003104 3.2e-39 166.4 240 41.2
Manes.09G144800 Manihot esculenta HOM05D002861 ORTHO05D003104 6.0e-38 162.2 297 37.7
Thecc.05G260700 Theobroma cacao HOM05D002861 ORTHO05D003104 2.3e-37 160.2 298 35.9
Potri.019G029800 Populus trichocarpa HOM05D002861 ORTHO05D003104 1.5e-36 157.5 302 36.4
Potri.019G030300 Populus trichocarpa HOM05D002861 ORTHO05D003104 1.5e-36 157.5 301 37.5
MD12G1254900 Malus domestica HOM05D002861 ORTHO05D003104 3.3e-36 156.4 298 36.9
TWI34G1014 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 3.3e-36 156.4 303 35.6
Duzib177G0372 Durio zibethinus HOM05D002861 ORTHO05D003104 5.6e-36 155.6 299 36.1
COL.COLO4_20548 Corchorus olitorius HOM05D002861 ORTHO05D003104 7.4e-36 155.2 291 36.1
TWI34G0682 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 9.6e-36 154.8 303 35.6
Sabra19G0036700 Salix brachista HOM05D002861 ORTHO05D003104 1.6e-35 154.1 305 36.7
Cpa.g.sc51.68 Carica papaya HOM05D002861 ORTHO05D003104 2.1e-35 153.7 297 35.4
Eucgr.B02175 Eucalyptus grandis HOM05D002861 ORTHO05D003104 2.1e-35 153.7 286 36.0
QL04p087697 Quercus lobata HOM05D002861 ORTHO05D003104 3.7e-35 152.9 306 37.3
Gohir.D11G250600 Gossypium hirsutum HOM05D002861 ORTHO05D003104 6.2e-35 152.1 291 33.3
Gorai.007G268700 Gossypium raimondii HOM05D002861 ORTHO05D003104 6.2e-35 152.1 291 33.3
QL04p087457 Quercus lobata HOM05D002861 ORTHO05D003104 1.1e-34 151.4 302 36.8
QL03p068890 Quercus lobata HOM05D002861 ORTHO05D003104 1.4e-34 151.0 303 37.0
TWI34G1363 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 1.8e-34 150.6 307 34.5
Sabra19G0037000 Salix brachista HOM05D002861 ORTHO05D003104 2.4e-34 150.2 297 34.3
RcHm_v2.0_Chr3g0448711 Rosa chinensis HOM05D002861 ORTHO05D003104 9.0e-34 148.3 296 34.5
RcHm_v2.0_Chr3g0448691 Rosa chinensis HOM05D002861 ORTHO05D003104 1.2e-33 147.9 298 35.2
Migut.F01820 Erythranthe guttata HOM05D002861 ORTHO05D003104 1.5e-33 147.5 293 34.1
QL04p087826 Quercus lobata HOM05D002861 ORTHO05D003104 2.6e-33 146.7 327 35.8
Ciclev10020477m.g Citrus clementina HOM05D002861 ORTHO05D003104 4.5e-33 146.0 296 34.1
Potri.019G030200 Populus trichocarpa HOM05D002861 ORTHO05D003104 4.5e-33 146.0 301 37.2
Potri.019G029900 Populus trichocarpa HOM05D002861 ORTHO05D003104 5.8e-33 145.6 302 36.4
FvH4_6g01160 Fragaria vesca HOM05D002861 ORTHO05D003104 9.9e-33 144.8 297 33.7
Oeu007688.1 Olea europaea HOM05D002861 ORTHO05D003104 9.9e-33 144.8 304 33.6
MD12G1254400 Malus domestica HOM05D002861 ORTHO05D003104 1.3e-32 144.4 298 32.9
Sabra19G0036800 Salix brachista HOM05D002861 ORTHO05D003104 3.8e-32 142.9 296 34.1
Atru.chr2.1237 Acer truncatum HOM05D002861 ORTHO05D003104 8.4e-32 141.7 303 35.3
Sabra19G0039500 Salix brachista HOM05D002861 ORTHO05D003104 1.4e-31 141.0 308 32.8
Hund07150 Selenicereus undatus HOM05D002861 ORTHO05D003104 1.4e-31 141.0 304 31.9
MD12G1254300 Malus domestica HOM05D002861 ORTHO05D003104 5.5e-31 139.0 296 34.5
MBI08_g01720_MAGBIO Magnolia biondii HOM05D002861 ORTHO05D003104 9.3e-31 138.3 281 39.5
ClCG11G010120 Citrullus lanatus HOM05D002861 ORTHO05D003104 1.6e-30 137.5 309 32.4
Cc09_g03190 Coffea canephora HOM05D002861 ORTHO05D003104 2.7e-30 136.7 323 32.2
Eucgr.B02178 Eucalyptus grandis HOM05D002861 ORTHO05D003104 4.6e-30 136.0 300 33.7
Sabra19G0036500 Salix brachista HOM05D002861 ORTHO05D003104 7.9e-30 135.2 304 34.9
FAN05G1070 Fragaria x ananassa HOM05D002861 ORTHO05D003104 3.0e-29 133.3 293 35.2
Eucgr.B02174 Eucalyptus grandis HOM05D002861 ORTHO05D003104 8.7e-29 131.7 300 32.3
Gohir.A11G241200 Gossypium hirsutum HOM05D002861 ORTHO05D003104 8.7e-29 131.7 294 31.0
Nn1g07959 Nelumbo nucifera HOM05D002861 ORTHO05D003104 8.7e-29 131.7 299 31.1
Sabra19G0037100 Salix brachista HOM05D002861 ORTHO05D003104 1.1e-28 131.3 311 30.9
Sabra19G0039600 Salix brachista HOM05D002861 ORTHO05D003104 1.1e-28 131.3 318 31.4
MELO3C008673.2 Cucumis melo HOM05D002861 ORTHO05D003104 1.9e-28 130.6 294 33.7
Solyc04g050920.3 Solanum lycopersicum HOM05D002861 ORTHO05D003104 1.9e-28 130.6 282 31.2
Sopen04g022040 Solanum pennellii HOM05D002861 ORTHO05D003104 1.9e-28 130.6 287 32.1
MD12G1254700 Malus domestica HOM05D002861 ORTHO05D003104 2.5e-28 130.2 296 33.8
CsaV3_2G010200 Cucumis sativus L. HOM05D002861 ORTHO05D003104 3.3e-28 129.8 296 34.1
FAN05G3792 Fragaria x ananassa HOM05D002861 ORTHO05D003104 1.3e-27 127.9 295 34.2
Sabra19G0036400 Salix brachista HOM05D002861 ORTHO05D003104 1.3e-27 127.9 310 31.0
Sed0017655 Sechium edule HOM05D002861 ORTHO05D003104 1.3e-27 127.9 297 33.3
TWI60G0586 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 2.1e-27 127.1 285 31.6
PGR142G3755 Punica granatum HOM05D002861 ORTHO05D003104 2.8e-27 126.7 285 31.9
Sed0011787 Sechium edule HOM05D002861 ORTHO05D003104 2.8e-27 126.7 297 33.0
FAN09G2703 Fragaria x ananassa HOM05D002861 ORTHO05D003104 3.7e-27 126.3 210 37.1
Peaxi162Scf01399g00018 Petunia axillaris HOM05D002861 ORTHO05D003104 4.8e-27 125.9 280 31.8
MD12G1254800 Malus domestica HOM05D002861 ORTHO05D003104 6.2e-27 125.6 294 33.0
MD12G1254000 Malus domestica HOM05D002861 ORTHO05D003104 1.1e-26 124.8 299 31.1
AL5G35360 Arabidopsis lyrata HOM05D002861 ORTHO05D003104 1.8e-26 124.0 286 31.5
PGR031G2463 Punica granatum HOM05D002861 ORTHO05D003104 2.4e-26 123.6 303 31.0
PGSC0003DMG402010686 Solanum tuberosum HOM05D002861 ORTHO05D003104 9.0e-26 121.7 293 31.1
FAN02G4407 Fragaria x ananassa HOM05D002861 ORTHO05D003104 1.2e-25 121.3 297 32.0
MD04G1235900 Malus domestica HOM05D002861 ORTHO05D003104 1.2e-25 121.3 293 32.4
Eucgr.B02176 Eucalyptus grandis HOM05D002861 ORTHO05D003104 2.0e-25 120.6 248 32.3
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 2.0e-25 120.6 298 30.5
Haze_04504 Corylus avellana HOM05D002861 ORTHO05D003104 2.6e-25 120.2 247 34.4
PGSC0003DMG400005316 Solanum tuberosum HOM05D002861 ORTHO05D003104 2.6e-25 120.2 277 33.6
Sabra19G0036600 Salix brachista HOM05D002861 ORTHO05D003104 4.5e-25 119.4 342 29.5
AT2G38430 Arabidopsis thaliana HOM05D002861 ORTHO05D003104 1.7e-24 117.5 282 31.2
A09p47310 Brassica napus HOM05D002861 ORTHO05D003104 2.2e-24 117.1 277 30.7
BraA09t40192Z Brassica rapa HOM05D002861 ORTHO05D003104 2.2e-24 117.1 277 30.7
BolC8t50560H Brassica oleracea HOM05D002861 ORTHO05D003104 2.9e-24 116.7 278 30.6
FAN14G1630 Fragaria x ananassa HOM05D002861 ORTHO05D003104 2.9e-24 116.7 297 32.0
PSO063G4438 Papaver somniferum HOM05D002861 ORTHO05D003104 6.5e-24 115.5 318 33.3
Ciclev10024529m.g Citrus clementina HOM05D002861 ORTHO05D003104 8.4e-24 115.2 281 30.6
Eucgr.B02177 Eucalyptus grandis HOM05D002861 ORTHO05D003104 1.1e-23 114.8 255 32.2
Ciclev10020557m.g Citrus clementina HOM05D002861 ORTHO05D003104 2.5e-23 113.6 290 30.7
Atru.chr2.955 Acer truncatum HOM05D002861 ORTHO05D003104 3.2e-23 113.2 315 31.4
ATR0069G026 Amborella trichopoda HOM05D002861 ORTHO05D003104 4.2e-23 112.8 292 29.5
Ciclev10023583m.g Citrus clementina HOM05D002861 ORTHO05D003104 4.2e-23 112.8 303 30.0
Thhalv10010949m.g Eutrema salsugineum HOM05D002861 ORTHO05D003104 7.1e-23 112.1 281 29.9
PGR031G2797 Punica granatum HOM05D002861 ORTHO05D003104 7.1e-23 112.1 302 29.1
AL4G35700 Arabidopsis lyrata HOM05D002861 ORTHO05D003104 1.2e-22 111.3 295 30.2
C08p29540 Brassica napus HOM05D002861 ORTHO05D003104 1.2e-22 111.3 273 30.4
THA.LOC104826016 Tarenaya hassleriana HOM05D002861 ORTHO05D003104 1.6e-22 110.9 291 29.9
Atru.chr2.1241 Acer truncatum HOM05D002861 ORTHO05D003104 2.1e-22 110.5 291 30.6
BcaC01g05540 Brassica carinata HOM05D002861 ORTHO05D003104 2.1e-22 110.5 290 30.7
Aa31LG5G23910 Aethionema arabicum HOM05D002861 ORTHO05D003104 4.6e-22 109.4 289 28.0
BcaB01g03686 Brassica carinata HOM05D002861 ORTHO05D003104 4.6e-22 109.4 278 32.0
ClCG11G010150 Citrullus lanatus HOM05D002861 ORTHO05D003104 4.6e-22 109.4 298 31.5
Haze_04500 Corylus avellana HOM05D002861 ORTHO05D003104 6.0e-22 109.0 247 33.6
MBI11_g07443_MAGBIO Magnolia biondii HOM05D002861 ORTHO05D003104 1.8e-21 107.5 172 37.8
Carub.0005s2090 Capsella rubella HOM05D002861 ORTHO05D003104 6.7e-21 105.5 295 30.5
THA.LOC104826015 Tarenaya hassleriana HOM05D002861 ORTHO05D003104 6.7e-21 105.5 283 30.0
Nn1g07960 Nelumbo nucifera HOM05D002861 ORTHO05D003104 8.7e-21 105.1 282 30.9
BraA04t18408Z Brassica rapa HOM05D002861 ORTHO05D003104 1.1e-20 104.8 288 28.5
A03p21300 Brassica napus HOM05D002861 ORTHO05D003104 2.5e-20 103.6 282 30.5
BcaB01g00206 Brassica carinata HOM05D002861 ORTHO05D003104 4.3e-20 102.8 302 29.1
PGSC0003DMG401010686 Solanum tuberosum HOM05D002861 ORTHO05D003104 4.3e-20 102.8 278 29.9
A04p29400 Brassica napus HOM05D002861 ORTHO05D003104 5.7e-20 102.4 288 28.1
Ciclev10020321m.g Citrus clementina HOM05D002861 ORTHO05D003104 5.7e-20 102.4 300 29.3
Sp4g20750 Schrenkiella parvula HOM05D002861 ORTHO05D003104 9.7e-20 101.7 294 27.6
THA.LOC104826017 Tarenaya hassleriana HOM05D002861 ORTHO05D003104 9.7e-20 101.7 294 30.3
BcaC02g07466 Brassica carinata HOM05D002861 ORTHO05D003104 1.3e-19 101.3 288 29.5
C04p66700 Brassica napus HOM05D002861 ORTHO05D003104 1.3e-19 101.3 288 29.5
Carub.0005s2091 Capsella rubella HOM05D002861 ORTHO05D003104 1.3e-19 101.3 282 27.7
BolC4t28172H Brassica oleracea HOM05D002861 ORTHO05D003104 2.8e-19 100.1 288 29.5
Ciclev10020658m.g Citrus clementina HOM05D002861 ORTHO05D003104 2.8e-19 100.1 301 29.9
BcaB01g03684 Brassica carinata HOM05D002861 ORTHO05D003104 3.7e-19 99.8 286 26.9
Sabra19G0036900 Salix brachista HOM05D002861 ORTHO05D003104 3.7e-19 99.8 291 29.9
Zm00001eb181040 Zea mays HOM05D002861 ORTHO05D003104 3.7e-19 99.8 325 28.0
Ciclev10023351m.g Citrus clementina HOM05D002861 ORTHO05D003104 4.8e-19 99.4 292 28.1
Zm00001eb184490 Zea mays HOM05D002861 ORTHO05D003104 4.8e-19 99.4 323 27.9
C03p25170 Brassica napus HOM05D002861 ORTHO05D003104 6.3e-19 99.0 306 29.1
Thhalv10017863m.g Eutrema salsugineum HOM05D002861 ORTHO05D003104 8.2e-19 98.6 293 28.0
A03p21280 Brassica napus HOM05D002861 ORTHO05D003104 1.4e-18 97.8 315 27.9
BraA03t11365Z Brassica rapa HOM05D002861 ORTHO05D003104 1.4e-18 97.8 315 27.9
Carub.0004s2040 Capsella rubella HOM05D002861 ORTHO05D003104 4.1e-18 96.3 293 28.7
BcaB06g29052 Brassica carinata HOM05D002861 ORTHO05D003104 1.5e-17 94.4 288 29.2
Ciclev10020909m.g Citrus clementina HOM05D002861 ORTHO05D003104 2.0e-17 94.0 263 28.1
CANSAT54G0345 Cannabis sativa HOM05D002861 ORTHO05D003104 5.9e-17 92.4 233 30.9
AUR62005296 Chenopodium quinoa HOM05D002861 ORTHO05D003104 5.9e-17 92.4 301 28.2
arahy.Tifrunner.gnm1.ann1.J7NADL Arachis hypogaea HOM05D002861 ORTHO05D003104 1.7e-16 90.9 274 30.7
arahy.Tifrunner.gnm1.ann1.7LN8RE Arachis hypogaea HOM05D002861 ORTHO05D003104 2.2e-16 90.5 270 30.7
CARHR133110 Cardamine hirsuta HOM05D002861 ORTHO05D003104 2.2e-16 90.5 298 28.2
AT3G54310 Arabidopsis thaliana HOM05D002861 ORTHO05D003104 1.1e-15 88.2 276 27.5
CANSAT54G2971 Cannabis sativa HOM05D002861 ORTHO05D003104 1.1e-15 88.2 312 27.6
Sp4g20755 Schrenkiella parvula HOM05D002861 ORTHO05D003104 1.4e-15 87.8 182 31.3
FvH4_6g01151 Fragaria vesca HOM05D002861 ORTHO05D003104 2.5e-15 87.0 114 40.4
MBI06_g25711_MAGBIO Magnolia biondii HOM05D002861 ORTHO05D003104 2.5e-15 87.0 135 37.0
C04p09150 Brassica napus HOM05D002861 ORTHO05D003104 4.2e-15 86.3 315 25.7
BolC4t22524H Brassica oleracea HOM05D002861 ORTHO05D003104 4.2e-15 86.3 315 25.7
EL10Ac4g09800 Beta vulgaris HOM05D002861 ORTHO05D003104 5.5e-15 85.9 167 34.1
A05p07620 Brassica napus HOM05D002861 ORTHO05D003104 2.1e-14 84.0 316 25.6
Aa31LG5G23930 Aethionema arabicum HOM05D002861 ORTHO05D003104 4.6e-14 82.8 281 27.8
PGSC0003DMG400045282 Solanum tuberosum HOM05D002861 ORTHO05D003104 1.4e-13 81.3 278 27.0
MD12G1253900 Malus domestica HOM05D002861 ORTHO05D003104 1.8e-13 80.9 136 36.0
THA.LOC104827370 Tarenaya hassleriana HOM05D002861 ORTHO05D003104 2.3e-13 80.5 229 30.1
C03p25190 Brassica napus HOM05D002861 ORTHO05D003104 5.1e-13 79.3 290 26.9
BolC3t14914H Brassica oleracea HOM05D002861 ORTHO05D003104 5.1e-13 79.3 290 26.9
BraA05t19730Z Brassica rapa HOM05D002861 ORTHO05D003104 2.0e-12 77.4 290 25.9
Nitab4.5_0003575g0040 Nicotiana tabacum HOM05D002861 ORTHO05D003104 9.7e-12 75.1 235 28.5
Aa31LG5G23950 Aethionema arabicum HOM05D002861 ORTHO05D003104 2.8e-11 73.6 286 27.6
Aa31LG5G23970 Aethionema arabicum HOM05D002861 ORTHO05D003104 2.8e-11 73.6 286 27.6
PSO063G6646 Papaver somniferum HOM05D002861 ORTHO05D003104 2.8e-11 73.6 233 30.0
BcaB02g09188 Brassica carinata HOM05D002861 ORTHO05D003104 3.7e-11 73.2 304 25.3
MD12G1253500 Malus domestica HOM05D002861 ORTHO05D003104 3.7e-11 73.2 162 32.1
PGR031G1681 Punica granatum HOM05D002861 ORTHO05D003104 3.7e-11 73.2 128 33.6
Aa31LG5G8370 Aethionema arabicum HOM05D002861 ORTHO05D003104 1.8e-10 70.9 303 22.1
AUR62000657 Chenopodium quinoa HOM05D002861 ORTHO05D003104 1.8e-10 70.9 305 27.5
FvH4_6g01152 Fragaria vesca HOM05D002861 ORTHO05D003104 3.1e-10 70.1 162 33.3
Os02g0504100 Oryza sativa ssp. japonica HOM05D002861 ORTHO05D003104 3.1e-10 70.1 276 25.4
Eucgr.L02940 Eucalyptus grandis HOM05D002861 ORTHO05D003104 5.3e-10 69.3 165 33.9
Sp5g08080 Schrenkiella parvula HOM05D002861 ORTHO05D003104 5.3e-10 69.3 275 26.5
Aa31sc46G60 Aethionema arabicum HOM05D002861 ORTHO05D003104 9.1e-10 68.6 297 26.3
BcaB08g34773 Brassica carinata HOM05D002861 ORTHO05D003104 1.2e-09 68.2 181 26.0
Nitab4.5_0000344g0020 Nicotiana tabacum HOM05D002861 ORTHO05D003104 1.5e-09 67.8 98 38.8
PGSC0003DMG400005315 Solanum tuberosum HOM05D002861 ORTHO05D003104 1.7e-08 64.3 152 30.9
SEGI_08285 Sequoiadendron giganteum HOM05D002861 ORTHO05D003104 2.2e-08 63.9 275 23.3
C03p25180 Brassica napus HOM05D002861 ORTHO05D003104 8.5e-08 62.0 258 24.8
Nitab4.5_0003575g0010 Nicotiana tabacum HOM05D002861 ORTHO05D003104 1.1e-07 61.6 131 29.8
Aa31LG5G24020 Aethionema arabicum HOM05D002861 ORTHO05D003104 1.2e-06 58.2 277 26.7
Aa31LG5G24050 Aethionema arabicum HOM05D002861 ORTHO05D003104 1.2e-06 58.2 277 26.7
CSS0016727 Camellia sinensis var. sinensis HOM05D002861 ORTHO05D003104 4.7e-06 56.2 82 42.7
CSS0020648 Camellia sinensis var. sinensis HOM05D002861 ORTHO05D003104 4.7e-06 56.2 82 42.7
ATR0069G064 Amborella trichopoda HOM05D002861 ORTHO05D003104 6.1e-06 55.8 170 28.2
PGSC0003DMG400046883 Solanum tuberosum HOM05D002861 ORTHO05D003104 6.1e-06 55.8 187 28.3


User provided reference genes

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