Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 4.2e-240 834.3 435 100.0
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 1.0e-238 829.7 435 99.3
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.3e-196 689.9 437 83.3
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 1.6e-194 682.9 435 79.5
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 7.7e-194 680.6 435 81.6
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 2.3e-193 679.1 437 81.5
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.9e-193 678.7 435 78.6
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 1.5e-192 676.4 433 81.8
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 7.2e-192 674.1 435 78.9
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 9.5e-192 673.7 430 79.5
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 2.8e-191 672.2 432 80.3
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 2.8e-191 672.2 383 87.2
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 6.1e-191 671.0 436 81.4
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 2.3e-190 669.1 436 80.3
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 2.3e-190 669.1 438 81.5
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 3.0e-190 668.7 436 80.7
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 4.0e-190 668.3 436 78.0
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 5.2e-190 667.9 372 90.6
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 8.9e-190 667.2 434 78.3
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 8.9e-190 667.2 437 80.5
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.2e-189 666.8 436 77.8
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.5e-189 666.4 436 79.4
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 5.7e-189 664.5 419 80.2
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 9.8e-189 663.7 437 78.7
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 9.8e-189 663.7 435 79.1
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 1.7e-188 662.9 392 86.0
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 4.9e-188 661.4 433 78.8
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 8.3e-188 660.6 435 79.1
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.4e-187 659.8 435 77.0
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.8e-187 659.4 436 79.4
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 1.8e-187 659.4 436 79.4
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 2.4e-187 659.1 383 86.9
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 4.1e-187 658.3 449 74.8
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 9.2e-187 657.1 435 76.6
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 4.5e-186 654.8 438 79.5
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 7.8e-186 654.1 385 86.0
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 7.8e-186 654.1 436 78.7
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.0e-185 653.7 385 86.5
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.0e-185 653.7 435 77.2
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 1.3e-185 653.3 436 79.4
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 1.3e-185 653.3 436 79.4
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 1.7e-185 652.9 437 79.2
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.7e-185 652.9 439 79.0
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 1.7e-185 652.9 445 76.4
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.8e-185 651.7 383 84.1
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 3.8e-185 651.7 437 77.6
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 3.8e-185 651.7 437 77.1
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 3.8e-185 651.7 423 80.6
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 6.6e-185 651.0 434 78.8
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 6.6e-185 651.0 438 77.4
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 1.1e-184 650.2 435 77.5
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.5e-184 649.8 437 76.9
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.5e-184 649.8 439 77.7
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 1.5e-184 649.8 437 76.9
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 1.9e-184 649.4 435 79.3
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 2.5e-184 649.0 438 78.8
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 4.3e-184 648.3 439 78.8
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 4.3e-184 648.3 412 80.8
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 5.6e-184 647.9 435 78.4
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 7.3e-184 647.5 435 78.6
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.6e-183 646.4 435 75.6
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.6e-183 646.4 435 78.6
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 2.8e-183 645.6 435 77.9
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 6.1e-183 644.4 456 75.4
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 8.0e-183 644.0 412 81.6
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.4e-182 643.3 400 83.8
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.8e-182 642.9 444 77.7
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 2.3e-182 642.5 433 78.5
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 1.2e-181 640.2 423 79.7
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 1.5e-181 639.8 435 77.7
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 2.0e-181 639.4 409 80.0
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 7.5e-181 637.5 458 72.7
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 7.5e-181 637.5 438 77.9
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 1.3e-180 636.7 444 76.6
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 1.7e-180 636.3 433 76.9
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 8.3e-180 634.0 443 77.9
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 4.1e-179 631.7 435 77.0
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 7.0e-179 630.9 435 77.5
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.6e-178 629.8 402 82.8
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 3.5e-178 628.6 436 78.4
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.7e-177 626.3 365 87.4
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 2.3e-177 625.9 336 89.9
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 3.9e-177 625.2 365 87.9
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 5.0e-177 624.8 365 86.3
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.1e-176 623.6 385 84.9
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 7.3e-176 620.9 329 91.8
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 8.0e-175 617.5 364 86.8
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.3e-174 615.9 436 74.1
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 4.0e-174 615.1 431 75.2
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 2.0e-173 612.8 429 74.4
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 5.8e-173 611.3 404 79.2
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 7.5e-173 610.9 403 79.2
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 1.7e-172 609.8 428 74.5
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 2.9e-172 609.0 436 75.9
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 8.3e-172 607.4 437 73.7
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.9e-171 606.3 436 75.7
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 2.4e-171 605.9 434 75.6
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.4e-171 605.9 434 75.6
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.2e-171 605.5 436 75.2
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 1.2e-170 603.6 436 76.1
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 5.6e-168 594.7 379 76.3
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 3.6e-167 592.0 405 74.6
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 4.7e-167 591.7 372 79.0
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.3e-166 589.3 433 72.7
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 8.9e-166 587.4 315 89.2
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 4.4e-165 585.1 402 73.6
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 3.7e-164 582.0 363 78.2
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 3.7e-164 582.0 393 72.8
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 2.4e-163 579.3 387 79.1
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 4.1e-163 578.6 387 79.1
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 9.2e-163 577.4 376 75.5
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 2.1e-162 576.2 404 71.0
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 1.0e-161 573.9 382 79.1
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 6.8e-158 561.2 327 90.2
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 3.2e-155 552.4 283 96.8
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 8.1e-151 537.7 369 73.7
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 3.0e-145 519.2 374 71.7
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.9e-144 516.5 371 74.4
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 2.1e-135 486.5 337 72.1
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 4.8e-135 485.3 327 73.1
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.8e-134 483.4 354 73.2
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 9.0e-134 481.1 336 71.4
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 9.0e-134 481.1 329 72.3
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.5e-133 480.3 329 72.0
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 5.8e-133 478.4 329 72.3
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 2.9e-132 476.1 327 72.8
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 2.9e-132 476.1 327 72.8
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 2.9e-132 476.1 327 72.8
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 3.2e-131 472.6 329 72.0
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 7.1e-131 471.5 329 72.0
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 2.1e-130 469.9 329 71.4
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 3.0e-129 466.1 433 62.1
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 7.4e-128 461.5 268 84.3
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 5.1e-121 438.7 392 56.6
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 1.5e-120 437.2 344 61.0
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 6.3e-119 431.8 312 67.9
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 3.1e-110 402.9 353 63.7
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 3.1e-110 402.9 328 68.3
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.2e-109 401.0 282 70.9
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 3.9e-105 386.0 224 85.3
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 1.8e-89 334.0 228 77.2
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.8e-74 283.5 234 64.1
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.7e-74 282.7 193 74.6
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 5.9e-69 265.8 201 65.2
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 7.3e-67 258.8 294 51.4
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 8.3e-63 245.4 276 49.6
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 8.1e-58 228.8 139 77.7
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 2.6e-56 223.8 182 61.5
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 2.4e-54 217.2 182 60.4
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 3.3e-51 206.8 311 39.5
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-46 191.4 178 55.1
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 2.1e-45 187.6 101 86.1
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 7.8e-45 185.7 148 66.2
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.0e-44 185.3 100 91.0
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 1.7e-44 184.5 104 86.5
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 3.9e-44 183.3 172 55.2
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 1.9e-43 181.0 101 83.2
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 2.5e-43 180.6 171 62.0
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 9.9e-40 168.7 100 80.0
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 8.4e-39 165.6 182 51.6
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 7.8e-37 159.1 77 93.5
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.5e-35 154.1 135 63.7
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 4.8e-34 149.8 212 39.6
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 1.8e-33 147.9 122 66.4
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.5e-32 144.8 76 84.2
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 9.6e-27 125.6 72 86.1
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 9.0e-25 119.0 74 82.4
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 7.9e-21 105.9 106 55.7
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 4.8e-18 96.7 181 37.6
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 1.2e-13 82.0 97 51.5
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 1.2e-13 82.0 97 51.5
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 2.7e-13 80.9 49 79.6
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.3e-12 77.8 53 67.9
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 6.3e-10 69.7 36 94.4
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 3.4e-08 63.9 45 71.1


User provided reference genes

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