Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 6.4e-123 444.1 229 100.0
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.0e-56 222.6 169 68.6
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 5.7e-55 218.4 195 61.0
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 1.3e-54 217.2 184 63.6
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 2.8e-54 216.1 198 58.6
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 2.8e-54 216.1 227 55.9
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 1.8e-53 213.4 192 59.9
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.1e-53 212.6 156 70.5
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 4.1e-53 212.2 196 59.7
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 1.2e-52 210.7 184 61.4
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.2e-52 210.7 156 69.9
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.2e-52 210.7 156 69.9
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 2.0e-52 209.9 157 67.5
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 2.7e-52 209.5 162 67.9
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 4.5e-52 208.8 183 59.6
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 5.9e-52 208.4 168 65.5
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 7.7e-52 208.0 177 63.8
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 1.0e-51 207.6 170 62.9
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 2.3e-51 206.5 236 53.8
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 2.9e-51 206.1 194 58.2
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 3.8e-51 205.7 198 58.6
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.0e-51 205.3 199 59.3
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 5.0e-51 205.3 183 59.0
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 8.6e-51 204.5 206 57.8
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 1.1e-50 204.1 186 60.2
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.5e-50 203.8 135 72.6
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 1.5e-50 203.8 159 63.5
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.9e-50 203.4 198 58.1
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 4.2e-50 202.2 159 66.0
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 9.5e-50 201.1 173 61.3
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 2.8e-49 199.5 201 55.2
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 4.7e-49 198.7 157 66.2
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 4.7e-49 198.7 151 66.9
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 4.7e-49 198.7 179 59.8
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 6.1e-49 198.4 158 65.2
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 6.1e-49 198.4 163 63.2
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 8.0e-49 198.0 160 63.8
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 8.0e-49 198.0 150 67.3
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 8.0e-49 198.0 159 64.8
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 1.4e-48 197.2 162 63.6
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 1.4e-48 197.2 160 65.6
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 1.4e-48 197.2 169 60.9
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 1.8e-48 196.8 155 64.5
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 2.3e-48 196.4 154 64.3
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 2.3e-48 196.4 184 58.2
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 3.0e-48 196.1 165 63.6
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 3.0e-48 196.1 162 64.2
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 6.8e-48 194.9 183 57.4
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 8.9e-48 194.5 166 62.0
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 5.7e-47 191.8 212 50.5
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 7.5e-47 191.4 124 75.0
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 1.3e-46 190.7 192 54.7
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.3e-46 190.7 227 51.1
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 2.2e-46 189.9 180 56.7
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 2.8e-46 189.5 166 61.4
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 2.8e-46 189.5 146 65.1
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 4.9e-46 188.7 184 56.0
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 6.3e-46 188.3 181 56.4
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 8.3e-46 188.0 130 66.9
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 8.3e-46 188.0 167 59.3
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.4e-45 187.2 221 48.9
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 4.1e-45 185.7 169 56.2
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 2.7e-44 183.0 188 56.9
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 3.5e-44 182.6 156 59.0
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.0e-43 181.0 148 63.5
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.3e-43 179.9 155 60.6
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.3e-43 179.9 197 50.3
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 1.5e-42 177.2 120 71.7
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 2.5e-42 176.4 117 70.1
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 7.3e-42 174.9 183 53.0
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 2.1e-41 173.3 160 56.2
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 4.0e-40 169.1 187 51.9
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.2e-39 167.5 115 69.6
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 2.2e-38 163.3 125 66.4
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.4e-37 160.6 126 61.1
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 1.9e-37 160.2 201 45.8
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 5.4e-37 158.7 124 61.3
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.1e-34 151.0 142 57.0
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 1.9e-34 150.2 188 45.7
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 7.3e-34 148.3 123 59.3
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 3.6e-33 146.0 124 58.9
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.1e-32 142.9 199 47.7
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 4.0e-32 142.5 85 80.0
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 4.0e-32 142.5 92 73.9
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 3.4e-31 139.4 92 73.9
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 4.9e-30 135.6 124 57.3
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.6e-28 130.6 101 68.3
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 2.1e-28 130.2 225 40.0
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 2.1e-28 130.2 126 55.6
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.7e-28 129.8 83 79.5
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 4.6e-28 129.0 124 51.6
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.8e-28 128.3 94 70.2
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.1e-27 125.6 156 49.4
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 4.3e-26 122.5 71 80.3
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.6e-25 120.6 83 71.1
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 4.7e-25 119.0 118 56.8
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 2.2e-22 110.2 80 66.2
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.6e-20 102.4 206 38.8
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 7.3e-18 95.1 92 54.3
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 3.6e-17 92.8 53 83.0
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 8.9e-16 88.2 70 64.3
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 5.8e-15 85.5 128 43.8
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 3.8e-14 82.8 130 38.5
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 2.4e-13 80.1 156 34.6
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 1.3e-11 74.3 40 85.0
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 3.9e-11 72.8 125 35.2
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 4.3e-10 69.3 115 34.8
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 4.3e-10 69.3 199 30.7
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 3.6e-09 66.2 152 29.6
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 4.8e-09 65.9 142 30.3
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 4.8e-09 65.9 190 31.1
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 4.8e-09 65.9 115 34.8
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 1.1e-08 64.7 189 30.7
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 1.4e-08 64.3 177 29.4
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 1.8e-08 63.9 176 29.5
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 4.0e-08 62.8 173 30.6
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 4.0e-08 62.8 182 29.7
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 5.3e-08 62.4 190 30.5
PGSC0003DMG400027028 Solanum tuberosum HOM05D009116 ORTHO05D011299 6.9e-08 62.0 192 29.7
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 1.2e-07 61.2 112 34.8
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 1.2e-07 61.2 209 28.2
Sopen06g029290 Solanum pennellii HOM05D009116 ORTHO05D011299 2.0e-07 60.5 192 29.7
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 2.6e-07 60.1 121 31.4
CAN.G65.136 Capsicum annuum HOM05D009116 ORTHO05D011299 3.4e-07 59.7 194 27.8
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 4.4e-07 59.3 122 32.0
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 9.9e-07 58.2 96 42.7
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 4.9e-06 55.8 215 28.8
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 8.4e-06 55.1 121 30.6
Pp3c2_11540 Physcomitrium patens HOM05D009116 ORTHO05D011299 8.4e-06 55.1 111 31.5


User provided reference genes

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