Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 2.7e-253 878.2 467 100.0
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 3.3e-65 253.4 448 40.6
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 1.2e-62 245.0 444 39.9
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 5.8e-62 242.7 448 38.8
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.1e-60 238.4 379 41.7
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 3.6e-56 223.4 366 42.1
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 3.6e-56 223.4 366 42.1
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 1.7e-53 214.5 328 40.5
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 1.9e-52 211.1 346 40.2
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 2.1e-51 207.6 315 43.2
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 2.7e-51 207.2 431 36.7
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 2.7e-51 207.2 449 34.5
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 1.7e-50 204.5 348 40.2
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 5.1e-50 203.0 354 39.8
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 1.1e-49 201.8 348 39.4
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 9.6e-49 198.7 352 37.8
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 4.8e-48 196.4 359 40.1
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 4.8e-48 196.4 349 37.5
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 8.1e-48 195.7 357 39.8
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 1.1e-47 195.3 363 38.6
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.4e-47 194.9 375 36.8
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 1.4e-47 194.9 375 36.8
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 1.8e-47 194.5 356 39.0
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 3.1e-47 193.7 445 34.2
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 5.3e-47 193.0 373 36.5
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 4.4e-46 189.9 340 39.7
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 7.6e-46 189.1 358 38.0
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 9.9e-46 188.7 309 40.5
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 1.3e-45 188.3 367 38.7
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 2.9e-45 187.2 422 34.8
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 4.9e-45 186.4 377 37.9
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 4.2e-44 183.3 403 33.3
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 4.2e-44 183.3 401 33.7
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 4.2e-44 183.3 403 33.3
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 4.2e-44 183.3 403 33.3
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 4.2e-44 183.3 354 35.9
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 3.5e-43 180.3 283 40.6
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 7.9e-43 179.1 442 34.4
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 1.3e-42 178.3 457 33.0
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.3e-42 178.3 367 37.6
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 3.9e-42 176.8 367 37.9
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 5.1e-42 176.4 408 32.1
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 1.5e-41 174.9 428 32.7
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 1.5e-41 174.9 401 31.4
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 2.1e-40 171.0 363 33.6
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 4.8e-40 169.9 402 31.8
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 6.2e-40 169.5 431 33.4
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 1.8e-39 167.9 400 33.0
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 2.4e-39 167.5 400 32.5
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 2.4e-39 167.5 221 46.2
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 6.9e-39 166.0 399 30.1
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 5.8e-38 162.9 318 34.9
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 9.3e-36 155.6 310 38.4
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 1.6e-35 154.8 238 40.3
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.8e-34 151.4 330 37.0
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 5.6e-33 146.4 397 30.0
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.8e-29 133.7 330 35.5
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 8.4e-29 132.5 200 42.0
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 1.1e-28 132.1 302 34.1
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.8e-23 114.8 336 32.7
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 5.3e-15 86.7 370 25.7
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 8.2e-08 62.8 87 44.8


User provided reference genes

Program Settings