Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 3.1e-101 372.5 302 100.0
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 1.4e-53 214.2 303 56.1
PSO675G6051 Papaver somniferum HOM05D008994 ORTHO05D010954 2.0e-23 114.0 68 91.2
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 6.9e-16 89.0 201 34.8
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 2.0e-15 87.4 209 35.9
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 4.5e-15 86.3 70 64.3
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 4.5e-15 86.3 70 64.3
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.3e-14 84.7 202 36.6
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 1.7e-14 84.3 176 37.5
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 2.9e-14 83.6 65 60.0
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 5.0e-14 82.8 195 34.9
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 6.5e-14 82.4 211 34.6
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 2.5e-13 80.5 190 35.3
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 2.5e-13 80.5 64 64.1
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 4.2e-13 79.7 171 36.8
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 5.5e-13 79.3 61 65.6
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 5.5e-13 79.3 61 65.6
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 5.5e-13 79.3 207 31.4
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 1.2e-12 78.2 173 34.7
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.6e-12 77.8 65 64.6
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 3.5e-12 76.6 63 65.1
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 4.6e-12 76.3 203 34.5
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 4.6e-12 76.3 58 67.2
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 6.1e-12 75.9 189 36.0
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 6.1e-12 75.9 206 34.5
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 6.1e-12 75.9 187 34.8
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 7.9e-12 75.5 215 34.0
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 7.9e-12 75.5 67 61.2
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 1.0e-11 75.1 187 32.6
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 1.0e-11 75.1 65 61.5
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 1.0e-11 75.1 174 35.6
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 1.3e-11 74.7 83 45.8
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 1.3e-11 74.7 65 61.5
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 1.8e-11 74.3 65 61.5
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 2.3e-11 73.9 196 33.2
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 3.0e-11 73.6 176 36.9
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 3.0e-11 73.6 63 61.9
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 3.9e-11 73.2 201 33.8
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 5.1e-11 72.8 187 32.6
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 6.7e-11 72.4 58 65.5
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 8.7e-11 72.0 213 34.3
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.1e-10 71.6 59 61.0
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.1e-10 71.6 59 61.0
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.9e-10 70.9 204 31.9
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 1.9e-10 70.9 206 31.6
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.5e-10 70.5 137 38.0
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 4.3e-10 69.7 63 57.1
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 7.4e-10 68.9 63 58.7
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 7.4e-10 68.9 59 57.6
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 9.7e-10 68.6 195 31.3
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 9.7e-10 68.6 66 59.1
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 1.3e-09 68.2 63 58.7
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 1.3e-09 68.2 63 57.1
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.3e-09 68.2 63 57.1
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 1.3e-09 68.2 60 60.0
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.3e-09 68.2 59 55.9
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.6e-09 67.8 154 34.4
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 2.2e-09 67.4 63 57.1
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.2e-09 67.4 63 57.1
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.8e-09 67.0 207 35.7
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 2.8e-09 67.0 63 58.7
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 2.8e-09 67.0 195 30.8
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 2.8e-09 67.0 183 32.8
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 3.7e-09 66.6 66 53.0
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 3.7e-09 66.6 177 33.9
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 3.7e-09 66.6 195 30.8
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 6.3e-09 65.9 194 30.9
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.4e-08 64.7 186 38.2
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 1.8e-08 64.3 63 55.6
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 1.8e-08 64.3 181 34.3
Os07g0656300 Oryza sativa ssp. japonica HOM05D022794 ORTHO05D023027 9.0e-08 62.0 62 59.7
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 1.2e-07 61.6 177 33.3
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 1.2e-07 61.6 219 29.2
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 2.0e-07 60.8 63 50.8
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 3.4e-07 60.1 177 32.8
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 3.4e-07 60.1 177 32.8
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 3.4e-07 60.1 177 32.8
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 4.5e-07 59.7 178 33.7
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 4.5e-07 59.7 58 55.2
Zm00001eb329530 Zea mays HOM05D022794 ORTHO05D023027 1.3e-06 58.2 63 52.4


User provided reference genes

Program Settings