Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3362 Papaver somniferum HOM05D004978 ORTHO05D005621 5.5e-95 350.9 171 100.0
PSO832G2480 Papaver somniferum HOM05D004978 ORTHO05D005621 1.5e-87 326.2 168 94.6
PSO210G1189 Papaver somniferum HOM05D004978 ORTHO05D005621 4.4e-84 314.7 161 93.8
TAR636G0163 Trochodendron aralioides HOM05D004978 ORTHO05D005621 5.4e-50 201.4 164 61.6
Nn1g02459 Nelumbo nucifera HOM05D004978 ORTHO05D005621 1.7e-48 196.4 162 60.5
CSS0039116 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 1.1e-45 187.2 164 57.9
FAN15G0608 Fragaria x ananassa HOM05D004978 ORTHO05D005621 2.0e-44 183.0 164 55.5
Sabra05G0164500 Salix brachista HOM05D004978 ORTHO05D005621 2.0e-44 183.0 167 56.9
TWI75G1276 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 4.4e-44 181.8 164 56.1
FAN27G2645 Fragaria x ananassa HOM05D004978 ORTHO05D005621 5.8e-44 181.4 164 55.5
Potri.005G215200 Populus trichocarpa HOM05D004978 ORTHO05D005621 9.9e-44 180.6 167 56.9
Cpa.g.sc52.119 Carica papaya HOM05D004978 ORTHO05D005621 1.3e-43 180.3 163 54.0
FAN20G1006 Fragaria x ananassa HOM05D004978 ORTHO05D005621 2.9e-43 179.1 164 54.3
FAN24G2655 Fragaria x ananassa HOM05D004978 ORTHO05D005621 2.9e-43 179.1 164 54.9
Duzib133G0140 Durio zibethinus HOM05D004978 ORTHO05D005621 4.9e-43 178.3 163 57.1
MD03G1258000 Malus domestica HOM05D004978 ORTHO05D005621 8.4e-43 177.6 164 55.5
CANSAT25G0263 Cannabis sativa HOM05D004978 ORTHO05D005621 1.9e-42 176.4 164 56.1
Aqoxy5G00398 Aquilegia oxysepala HOM05D004978 ORTHO05D005621 2.4e-42 176.0 164 56.1
Hund09547 Selenicereus undatus HOM05D004978 ORTHO05D005621 4.2e-42 175.3 163 52.1
MD11G1278700 Malus domestica HOM05D004978 ORTHO05D005621 9.3e-42 174.1 164 53.7
PGR044G1133 Punica granatum HOM05D004978 ORTHO05D005621 1.6e-41 173.3 163 54.0
Dinv32884 Davidia involucrata HOM05D004978 ORTHO05D005621 2.7e-41 172.6 162 54.3
Gohir.A08G063900 Gossypium hirsutum HOM05D004978 ORTHO05D005621 2.7e-41 172.6 158 57.0
EL10Ac5g10492 Beta vulgaris HOM05D004978 ORTHO05D005621 1.7e-40 169.9 163 51.5
Ciclev10019332m.g Citrus clementina HOM05D004978 ORTHO05D005621 2.3e-40 169.5 160 53.8
COL.COLO4_09187 Corchorus olitorius HOM05D004978 ORTHO05D005621 3.0e-40 169.1 162 54.9
CsaV3_7G027890 Cucumis sativus L. HOM05D004978 ORTHO05D005621 3.9e-40 168.7 164 54.3
QL12p042266 Quercus lobata HOM05D004978 ORTHO05D005621 3.9e-40 168.7 163 53.4
MELO3C015807.2 Cucumis melo HOM05D004978 ORTHO05D005621 5.1e-40 168.3 164 53.7
Gohir.D08G072400 Gossypium hirsutum HOM05D004978 ORTHO05D005621 5.1e-40 168.3 163 54.0
GSVIVG01003121001 Vitis vinifera HOM05D004978 ORTHO05D005621 6.6e-40 167.9 164 55.5
Gorai.004G076600 Gossypium raimondii HOM05D004978 ORTHO05D005621 8.7e-40 167.5 163 54.0
Migut.D00356 Erythranthe guttata HOM05D004978 ORTHO05D005621 1.1e-39 167.2 164 53.0
DCAR_002701 Daucus carota HOM05D004978 ORTHO05D005621 3.3e-39 165.6 164 50.6
HanXRQChr04g0113941 Helianthus annuus HOM05D004978 ORTHO05D005621 4.3e-39 165.2 163 50.3
Sc05g0001310 Simmondsia chinensis HOM05D004978 ORTHO05D005621 4.3e-39 165.2 164 52.4
Nitab4.5_0004115g0020 Nicotiana tabacum HOM05D004978 ORTHO05D005621 5.6e-39 164.9 164 53.7
Peaxi162Scf00259g00051 Petunia axillaris HOM05D004978 ORTHO05D005621 5.6e-39 164.9 164 55.5
Sopen09g027430 Solanum pennellii HOM05D004978 ORTHO05D005621 7.3e-39 164.5 161 54.7
AUR62032283 Chenopodium quinoa HOM05D004978 ORTHO05D005621 1.6e-38 163.3 160 52.5
Nitab4.5_0000459g0120 Nicotiana tabacum HOM05D004978 ORTHO05D005621 1.6e-38 163.3 164 53.0
Solyc09g065690.4 Solanum lycopersicum HOM05D004978 ORTHO05D005621 1.6e-38 163.3 161 54.0
vmacro14887 Vaccinium macrocarpon HOM05D004978 ORTHO05D005621 1.6e-38 163.3 164 53.7
Cc01_g19000 Coffea canephora HOM05D004978 ORTHO05D005621 2.1e-38 162.9 159 53.5
PGSC0003DMG400019309 Solanum tuberosum HOM05D004978 ORTHO05D005621 2.1e-38 162.9 161 54.0
Haze_04642 Corylus avellana HOM05D004978 ORTHO05D005621 3.6e-38 162.2 160 53.8
ClCG09G007410 Citrullus lanatus HOM05D004978 ORTHO05D005621 1.1e-37 160.6 164 53.0
Thecc.01G271500 Theobroma cacao HOM05D004978 ORTHO05D005621 1.1e-37 160.6 163 52.8
AUR62011971 Chenopodium quinoa HOM05D004978 ORTHO05D005621 2.4e-37 159.5 163 51.5
CAN.G433.6 Capsicum annuum HOM05D004978 ORTHO05D005621 3.1e-37 159.1 161 52.8
VMungo0720G1803 Vigna mungo HOM05D004978 ORTHO05D005621 5.3e-37 158.3 162 49.4
Ca_09727_v3 Cicer arietinum L. HOM05D004978 ORTHO05D005621 6.9e-37 157.9 161 50.9
SGA_v2.0_scaffold1G00534 Striga asiatica HOM05D004978 ORTHO05D005621 9.0e-37 157.5 167 51.5
ECA236G1829 Erigeron canadensis HOM05D004978 ORTHO05D005621 1.2e-36 157.1 163 51.5
CiPaw.07G086800 Carya illinoinensis HOM05D004978 ORTHO05D005621 2.6e-36 156.0 164 48.8
Sed0003895 Sechium edule HOM05D004978 ORTHO05D005621 2.6e-36 156.0 164 51.8
HPP92_027617 Vanilla planifolia HOM05D004978 ORTHO05D005621 9.9e-36 154.1 164 46.3
Cfa006202 Carpinus fangiana HOM05D004978 ORTHO05D005621 1.3e-35 153.7 181 48.1
Psat6g058480 Pisum sativum HOM05D004978 ORTHO05D005621 1.3e-35 153.7 164 47.0
arahy.Tifrunner.gnm1.ann1.54WUVN Arachis hypogaea HOM05D004978 ORTHO05D005621 2.2e-35 152.9 169 49.1
arahy.Tifrunner.gnm1.ann1.ZM38TH Arachis hypogaea HOM05D004978 ORTHO05D005621 3.8e-35 152.1 169 49.1
Phvul.007G175000 Phaseolus vulgaris HOM05D004978 ORTHO05D005621 4.9e-35 151.8 156 50.0
Lsat_1_v5_gn_8_93980 Lactuca sativa HOM05D004978 ORTHO05D005621 6.4e-35 151.4 170 47.6
CDE02G4319 Ceratophyllum demersum HOM05D004978 ORTHO05D005621 8.4e-35 151.0 161 49.7
Lalb_Chr02g0142521 Lupinus albus HOM05D004978 ORTHO05D005621 2.4e-34 149.4 171 46.8
Sp6g24570 Schrenkiella parvula HOM05D004978 ORTHO05D005621 3.2e-34 149.1 160 50.0
Sed0016751 Sechium edule HOM05D004978 ORTHO05D005621 3.2e-34 149.1 164 50.6
HPP92_022056 Vanilla planifolia HOM05D004978 ORTHO05D005621 3.2e-34 149.1 161 46.6
Lj5g0010127 Lotus japonicus HOM05D004978 ORTHO05D005621 4.2e-34 148.7 161 45.3
Medtr1g071300 Medicago truncatula HOM05D004978 ORTHO05D005621 4.2e-34 148.7 161 45.3
BcaB01g04828 Brassica carinata HOM05D004978 ORTHO05D005621 5.4e-34 148.3 162 48.8
Ah.11g050220 Amaranthus hybridus HOM05D004978 ORTHO05D005621 9.3e-34 147.5 160 47.5
C03p11220 Brassica napus HOM05D004978 ORTHO05D005621 1.2e-33 147.1 162 48.8
BcaB01g04842 Brassica carinata HOM05D004978 ORTHO05D005621 1.6e-33 146.7 162 48.1
CARHR193040 Cardamine hirsuta HOM05D004978 ORTHO05D005621 1.6e-33 146.7 157 49.7
Atru.chr5.1521 Acer truncatum HOM05D004978 ORTHO05D005621 2.1e-33 146.4 196 45.9
BolC3t13593H Brassica oleracea HOM05D004978 ORTHO05D005621 3.5e-33 145.6 162 48.8
Carub.0006s1818 Capsella rubella HOM05D004978 ORTHO05D005621 4.6e-33 145.2 160 50.0
AL6G31360 Arabidopsis lyrata HOM05D004978 ORTHO05D005621 2.3e-32 142.9 159 49.7
Glyma.10G029800 Glycine max HOM05D004978 ORTHO05D005621 3.0e-32 142.5 161 46.0
Aa31LG9G14570 Aethionema arabicum HOM05D004978 ORTHO05D005621 3.3e-31 139.0 158 46.8
AT5G19840 Arabidopsis thaliana HOM05D004978 ORTHO05D005621 4.3e-31 138.7 162 49.4
BraA03t10282Z Brassica rapa HOM05D004978 ORTHO05D005621 4.3e-31 138.7 163 47.2
A03p09660 Brassica napus HOM05D004978 ORTHO05D005621 5.6e-31 138.3 163 47.2
Thhalv10013262m.g Eutrema salsugineum HOM05D004978 ORTHO05D005621 9.6e-31 137.5 160 49.4
RcHm_v2.0_Chr6g0289901 Rosa chinensis HOM05D004978 ORTHO05D005621 1.8e-29 133.3 122 54.1
ATR0665G047 Amborella trichopoda HOM05D004978 ORTHO05D005621 9.9e-28 127.5 136 47.8
Prupe.8G234700 Prunus persica HOM05D004978 ORTHO05D005621 2.9e-27 125.9 164 44.5
Os01g0773200 Oryza sativa ssp. japonica HOM05D004978 ORTHO05D005621 3.5e-25 119.0 139 45.3
FvH4_2g22940 Fragaria vesca HOM05D004978 ORTHO05D005621 1.3e-22 110.5 102 55.9
Pp3c26_13750 Physcomitrium patens HOM05D004978 ORTHO05D005621 2.1e-22 109.8 164 38.4
Oeu014736.1 Olea europaea HOM05D004978 ORTHO05D005621 1.4e-21 107.1 195 33.3
QL01p000805 Quercus lobata HOM05D004978 ORTHO05D005621 2.6e-20 102.8 112 50.9
Sabra02G0039000 Salix brachista HOM05D004978 ORTHO05D005621 7.6e-20 101.3 83 55.4
Duzib211G0075 Durio zibethinus HOM05D004978 ORTHO05D005621 4.6e-17 92.0 63 69.8
AagrBONN_evm.TU.Sc2ySwM_117.2029 Anthoceros agrestis HOM05D004978 ORTHO05D005621 2.3e-16 89.7 168 32.1
SMO367G0146 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 1.9e-15 86.7 148 32.4
Rhsim01G0272000 Rhododendron simsii HOM05D004978 ORTHO05D005621 3.3e-15 85.9 106 48.1
Mapoly0003s0071 Marchantia polymorpha HOM05D004978 ORTHO05D005621 4.3e-15 85.5 185 31.9
Eucgr.K03324 Eucalyptus grandis HOM05D004978 ORTHO05D005621 5.7e-15 85.1 102 48.0
Dinv22502 Davidia involucrata HOM05D004978 ORTHO05D005621 1.9e-07 60.1 102 37.3
unitig_0.g1132 Utricularia gibba HOM05D004978 ORTHO05D005621 4.8e-06 55.5 166 30.7


User provided reference genes

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