Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 0.0e+00 1301.2 744 100.0
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 0.0e+00 1147.9 747 88.4
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 4.8e-244 848.2 526 82.5
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 2.6e-242 842.4 516 82.9
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 5.9e-242 841.3 516 81.4
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 1.0e-241 840.5 508 83.3
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 1.2e-239 833.6 511 81.8
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 1.4e-238 830.1 512 80.5
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 5.1e-238 828.2 540 78.1
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 8.8e-238 827.4 510 81.6
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 2.5e-237 825.9 511 80.2
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 7.4e-237 824.3 511 80.2
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 1.8e-235 819.7 517 79.9
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 9.1e-235 817.4 514 79.2
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 9.1e-235 817.4 511 78.5
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 1.5e-234 816.6 468 85.3
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 2.0e-234 816.2 509 80.4
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 2.0e-234 816.2 515 79.0
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.7e-233 813.1 521 80.0
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 3.8e-233 812.0 511 78.1
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 5.0e-233 811.6 513 78.6
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 5.0e-233 811.6 476 83.4
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 6.5e-233 811.2 511 79.6
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 8.5e-233 810.8 519 79.4
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 8.5e-233 810.8 517 78.3
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 1.4e-232 810.1 488 82.0
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 1.4e-232 810.1 517 78.1
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 1.4e-232 810.1 485 83.1
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 3.2e-232 808.9 508 79.5
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 5.5e-232 808.1 519 77.8
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 7.2e-232 807.7 516 79.5
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 2.1e-231 806.2 519 78.0
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 4.7e-231 805.1 521 78.5
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 6.1e-231 804.7 512 78.9
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 6.1e-231 804.7 459 84.7
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.0e-230 803.9 517 77.9
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 1.0e-230 803.9 560 73.0
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 1.0e-230 803.9 461 85.7
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 1.4e-230 803.5 523 77.8
Phvul.005G134800 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 2.3e-230 802.7 509 78.0
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.0e-230 802.4 517 79.5
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 3.9e-230 802.0 471 83.9
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 5.1e-230 801.6 531 77.6
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 4.4e-229 798.5 519 78.6
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 4.4e-229 798.5 520 77.3
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 5.7e-229 798.1 518 77.2
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 2.2e-228 796.2 486 81.3
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 2.2e-228 796.2 518 77.2
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 2.8e-228 795.8 522 77.2
Glyma.13G325700 Glycine max HOM05D003665 ORTHO05D004387 3.7e-228 795.4 510 78.0
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 6.3e-228 794.7 516 76.4
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 8.2e-228 794.3 509 77.0
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 1.1e-227 793.9 517 76.4
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 2.4e-227 792.7 518 77.0
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 7.0e-227 791.2 511 78.5
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 9.1e-227 790.8 517 79.3
EL10Ac2g02422 Beta vulgaris HOM05D003665 ORTHO05D004387 3.8e-225 785.4 552 72.8
Glyma.12G172200 Glycine max HOM05D003665 ORTHO05D004387 3.8e-225 785.4 506 77.7
VMungo1080G0406 Vigna mungo HOM05D003665 ORTHO05D004387 1.1e-224 783.9 509 76.4
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 1.5e-224 783.5 485 79.0
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 4.2e-224 781.9 578 71.5
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 4.2e-224 781.9 517 75.0
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 5.5e-224 781.6 517 74.9
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 9.4e-224 780.8 509 77.8
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 6.1e-223 778.1 509 76.0
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 1.0e-222 777.3 557 73.1
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 2.3e-222 776.2 525 74.1
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 5.2e-222 775.0 519 74.8
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.7e-220 770.0 509 75.8
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 1.7e-220 770.0 590 68.1
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 8.2e-220 767.7 517 76.0
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 1.4e-219 766.9 510 74.5
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 1.8e-219 766.5 510 73.5
Nitab4.5_0001997g0130 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.4e-219 766.1 454 81.9
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 5.9e-218 761.5 444 82.4
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 1.3e-217 760.4 509 75.0
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 2.9e-217 759.2 440 83.9
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 8.5e-217 757.7 516 74.2
Lalb_Chr24g0394651 Lupinus albus HOM05D003665 ORTHO05D004387 1.1e-216 757.3 449 81.1
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 1.9e-216 756.5 455 82.2
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 3.2e-216 755.7 460 78.7
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 3.2e-216 755.7 435 84.4
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 9.4e-216 754.2 463 81.9
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 2.1e-215 753.1 494 77.7
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 3.6e-215 752.3 511 72.4
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 1.0e-214 750.7 514 73.2
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 1.2e-213 747.3 498 76.9
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 3.4e-213 745.7 569 67.8
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 1.3e-212 743.8 513 71.7
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 1.4e-211 740.3 507 71.0
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 5.3e-211 738.4 508 71.1
CARHR121340 Cardamine hirsuta HOM05D003665 ORTHO05D004387 7.0e-211 738.0 515 70.7
AL4G21640 Arabidopsis lyrata HOM05D003665 ORTHO05D004387 1.2e-210 737.3 509 71.3
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 2.0e-210 736.5 455 82.6
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 1.3e-209 733.8 507 70.6
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 2.9e-209 732.6 476 76.9
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 1.9e-208 729.9 463 78.2
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 1.9e-208 729.9 519 69.6
Carub.0004s0931 Capsella rubella HOM05D003665 ORTHO05D004387 7.2e-208 728.0 507 69.6
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 9.4e-208 727.6 520 71.2
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 9.4e-208 727.6 519 69.4
Nitab4.5_0001195g0040 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.1e-207 726.5 499 73.3
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 3.6e-207 725.7 518 71.2
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 8.0e-207 724.5 519 69.2
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 8.0e-207 724.5 519 69.4
HanXRQChr14g0452781 Helianthus annuus HOM05D003665 ORTHO05D004387 1.0e-206 724.2 497 71.8
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 1.4e-206 723.8 520 69.0
AT2G28390 Arabidopsis thaliana HOM05D003665 ORTHO05D004387 1.8e-206 723.4 510 70.2
Lsat_1_v5_gn_1_64201 Lactuca sativa HOM05D003665 ORTHO05D004387 6.8e-206 721.5 518 71.4
SEGI_12034 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 2.0e-205 719.9 520 70.4
A07p18960 Brassica napus HOM05D003665 ORTHO05D004387 4.4e-205 718.8 513 70.0
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 9.8e-205 717.6 520 68.7
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 1.7e-204 716.8 498 70.9
C04p23090 Brassica napus HOM05D003665 ORTHO05D004387 1.7e-204 716.8 515 69.5
BolC4t23802H Brassica oleracea HOM05D003665 ORTHO05D004387 2.4e-203 713.0 518 68.7
BraA07t29601Z Brassica rapa HOM05D003665 ORTHO05D004387 4.1e-203 712.2 518 68.9
Lsat_1_v5_gn_2_100120 Lactuca sativa HOM05D003665 ORTHO05D004387 4.1e-203 712.2 511 70.1
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 1.0e-201 707.6 517 68.7
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 1.5e-197 693.7 457 75.5
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 3.4e-197 692.6 396 86.4
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 7.5e-197 691.4 463 75.2
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 3.2e-195 686.0 507 70.6
DCAR_006064 Daucus carota HOM05D003665 ORTHO05D004387 1.0e-190 671.0 519 69.2
SEGI_16973 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 1.8e-190 670.2 450 70.9
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 4.4e-189 665.6 438 77.4
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 1.7e-185 653.7 429 76.2
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 1.9e-184 650.2 384 82.6
HPP92_006598 Vanilla planifolia HOM05D003665 ORTHO05D004387 3.3e-184 649.4 516 66.7
Gohir.D08G215600 Gossypium hirsutum HOM05D003665 ORTHO05D004387 6.0e-178 628.6 424 75.2
Mapoly0115s0070 Marchantia polymorpha HOM05D003665 ORTHO05D004387 5.1e-177 625.5 511 62.0
Ah.12g061180 Amaranthus hybridus HOM05D003665 ORTHO05D004387 2.2e-172 610.1 437 70.7
SMO356G0046 Selaginella moellendorffii HOM05D003665 ORTHO05D004387 1.1e-171 607.8 496 60.9
Nitab4.5_0001211g0250 Nicotiana tabacum HOM05D003665 ORTHO05D004387 3.9e-169 599.4 547 61.4
Lj2C1027G11 Lonicera japonica HOM05D003665 ORTHO05D004387 1.5e-165 587.4 519 62.6
AUR62037705 Chenopodium quinoa HOM05D003665 ORTHO05D004387 4.9e-164 582.4 546 59.2
Pp3c3_30360 Physcomitrium patens HOM05D003665 ORTHO05D004387 5.1e-161 572.4 513 56.7
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 3.3e-160 569.7 331 84.3
AUR62020295 Chenopodium quinoa HOM05D003665 ORTHO05D004387 5.6e-160 568.9 516 61.2
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis HOM05D003665 ORTHO05D004387 2.0e-157 560.5 507 54.8
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.9e-155 553.9 331 83.1
Nitab4.5_0005900g0050 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.9e-155 553.9 522 60.5
Sabra04G0142700 Salix brachista HOM05D003665 ORTHO05D004387 6.0e-154 548.9 377 73.7
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis HOM05D003665 ORTHO05D004387 6.4e-148 528.9 473 56.2
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 3.3e-144 516.5 523 54.7
Pp3c10_13820 Physcomitrium patens HOM05D003665 ORTHO05D004387 6.9e-142 508.8 476 57.6
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 9.3e-139 498.4 312 78.2
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 1.5e-133 481.1 403 63.5
Zm00001eb139700 Zea mays HOM05D003665 ORTHO05D004387 5.0e-132 476.1 329 69.9
PGSC0003DMG400019504 Solanum tuberosum HOM05D003665 ORTHO05D004387 1.4e-115 421.4 285 75.1
Atru.chr3.3619 Acer truncatum HOM05D003665 ORTHO05D004387 4.4e-104 383.3 248 73.8
CAN.G479.67 Capsicum annuum HOM05D003665 ORTHO05D004387 1.2e-98 365.2 252 74.6
BcaB06g25423 Brassica carinata HOM05D003665 ORTHO05D004387 2.5e-91 340.9 291 61.5
CDE02G0373 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 6.8e-89 332.8 219 74.4
CDE08G1291 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.3e-71 275.4 201 72.6
CBR_g29308 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-71 275.0 211 61.6
Lsat_1_v5_gn_8_29480 Lactuca sativa HOM05D003665 ORTHO05D004387 4.1e-62 243.8 163 74.2
CDE02G1163 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 9.9e-56 222.6 201 62.2
MCO05G084 Micromonas commoda HOM05D003665 ORTHO05D004387 9.2e-54 216.1 650 27.1
Cfa025752 Carpinus fangiana HOM05D003665 ORTHO05D004387 1.3e-52 212.2 522 28.7
SHI09320 Sapria himalayana HOM05D003665 ORTHO05D004387 1.3e-52 212.2 189 57.1
Cre03.g154500 Chlamydomonas reinhardtii HOM05D003665 ORTHO05D004387 3.0e-52 211.1 270 42.6
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 4.3e-51 207.2 153 69.9
TPR.G35439 Trifolium pratense HOM05D003665 ORTHO05D004387 6.2e-50 203.4 143 71.3
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 5.2e-49 200.3 140 71.4
Lsat_1_v5_gn_6_45780 Lactuca sativa HOM05D003665 ORTHO05D004387 3.4e-48 197.6 133 72.9
Actinidia13995 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.4e-46 192.2 105 87.6
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 2.7e-45 188.0 132 69.7
Duzib235G1059 Durio zibethinus HOM05D003665 ORTHO05D004387 5.6e-43 180.3 154 66.2
Lsat_1_v5_gn_6_39960 Lactuca sativa HOM05D003665 ORTHO05D004387 7.3e-43 179.9 123 73.2
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea HOM05D003665 ORTHO05D004387 2.4e-38 164.9 129 65.9
Duzib084G1104 Durio zibethinus HOM05D003665 ORTHO05D004387 7.9e-29 133.3 102 68.6
SHI09317 Sapria himalayana HOM05D003665 ORTHO05D004387 7.9e-29 133.3 78 79.5
TPR.G15544 Trifolium pratense HOM05D003665 ORTHO05D004387 1.5e-27 129.0 63 85.7
Ca_23093_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 4.5e-24 117.5 65 87.7
VMungo0225G0001 Vigna mungo HOM05D003665 ORTHO05D004387 2.9e-23 114.8 68 82.4
Glyma.11G146000 Glycine max HOM05D003665 ORTHO05D004387 4.6e-21 107.5 108 56.5
SHI09315 Sapria himalayana HOM05D003665 ORTHO05D004387 1.1e-19 102.8 68 70.6
VMungo1074G0001 Vigna mungo HOM05D003665 ORTHO05D004387 1.5e-19 102.4 115 51.3
SHI09316 Sapria himalayana HOM05D003665 ORTHO05D004387 6.3e-18 97.1 63 68.3
BolC4t27275H Brassica oleracea HOM05D003665 ORTHO05D004387 8.7e-12 76.6 129 40.3
Lalb_Chr22g0350671 Lupinus albus HOM05D003665 ORTHO05D004387 9.7e-11 73.2 43 83.7
HanXRQChr06g0179151 Helianthus annuus HOM05D003665 ORTHO05D004387 1.2e-08 66.2 36 83.3
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 2.5e-06 58.5 32 87.5
C04p57550 Brassica napus HOM05D003665 ORTHO05D040370 3.2e-06 58.2 41 58.5
Lsat_1_v5_gn_4_144501 Lactuca sativa HOM05D000361 ORTHO05D005006 7.2e-06 57.0 32 84.4


User provided reference genes

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