Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3141 Papaver somniferum HOM05D003801 ORTHO05D004812 5.4e-243 844.0 442 100.0
PSO384G0852 Papaver somniferum HOM05D003801 ORTHO05D004812 7.1e-86 322.0 242 71.5
PSO339G1799 Papaver somniferum HOM05D003801 ORTHO05D004812 1.2e-85 321.2 242 71.5
GSVIVG01024601001 Vitis vinifera HOM05D003801 ORTHO05D004812 8.4e-79 298.5 249 61.8
TWI79G0650 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 3.0e-76 290.0 244 59.0
Potri.013G154300 Populus trichocarpa HOM05D003801 ORTHO05D004812 8.7e-76 288.5 244 60.2
Ciclev10000209m.g Citrus clementina HOM05D003801 ORTHO05D004812 1.5e-75 287.7 244 60.7
TWI75G1891 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 2.5e-75 287.0 244 59.4
Prupe.6G045000 Prunus persica HOM05D003801 ORTHO05D004812 3.3e-75 286.6 244 60.7
Manes.18G140750 Manihot esculenta HOM05D003801 ORTHO05D004812 5.6e-75 285.8 244 60.2
TAR369G0201 Trochodendron aralioides HOM05D003801 ORTHO05D004812 9.6e-75 285.0 244 61.9
Sabra19G0130000 Salix brachista HOM05D003801 ORTHO05D004812 2.8e-74 283.5 244 59.0
LjContig00141g0011314 Lotus japonicus HOM05D003801 ORTHO05D004812 3.7e-74 283.1 244 59.0
Psat2g052760 Pisum sativum HOM05D003801 ORTHO05D004812 3.7e-74 283.1 244 58.6
TAR623G1445 Trochodendron aralioides HOM05D003801 ORTHO05D004812 1.4e-73 281.2 244 60.7
PGR004G1069 Punica granatum HOM05D003801 ORTHO05D004812 1.8e-73 280.8 244 58.2
Sed0013919 Sechium edule HOM05D003801 ORTHO05D004812 2.4e-73 280.4 244 59.0
Nn5g27878 Nelumbo nucifera HOM05D003801 ORTHO05D004812 3.1e-73 280.0 244 59.8
VMungo0647G2088 Vigna mungo HOM05D003801 ORTHO05D004812 6.9e-73 278.9 244 57.4
Atru.chr1.2566 Acer truncatum HOM05D003801 ORTHO05D004812 9.0e-73 278.5 244 58.2
Atru.chr1.2574 Acer truncatum HOM05D003801 ORTHO05D004812 9.0e-73 278.5 244 58.2
Ca_05689_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 9.0e-73 278.5 244 57.8
Sabra19G0125000 Salix brachista HOM05D003801 ORTHO05D004812 2.0e-72 277.3 252 57.5
HanXRQChr08g0228441 Helianthus annuus HOM05D003801 ORTHO05D004812 3.4e-72 276.6 244 57.0
Gohir.D03G144200 Gossypium hirsutum HOM05D003801 ORTHO05D004812 4.5e-72 276.2 240 58.8
Thecc.09G360800 Theobroma cacao HOM05D003801 ORTHO05D004812 4.5e-72 276.2 240 59.2
Gorai.003G151500 Gossypium raimondii HOM05D003801 ORTHO05D004812 5.8e-72 275.8 240 58.8
RcHm_v2.0_Chr5g0072271 Rosa chinensis HOM05D003801 ORTHO05D004812 1.0e-71 275.0 244 59.0
ECA247G0395 Erigeron canadensis HOM05D003801 ORTHO05D004812 2.2e-71 273.9 244 56.1
CDE04G3388 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 2.9e-71 273.5 244 57.4
AUR62009720 Chenopodium quinoa HOM05D003801 ORTHO05D004812 1.1e-70 271.6 244 57.4
COL.COLO4_11183 Corchorus olitorius HOM05D003801 ORTHO05D004812 1.1e-70 271.6 240 58.3
Gohir.A03G024300 Gossypium hirsutum HOM05D003801 ORTHO05D004812 1.4e-70 271.2 240 57.9
AUR62036227 Chenopodium quinoa HOM05D003801 ORTHO05D004812 1.9e-70 270.8 244 57.0
TPR.G17744 Trifolium pratense HOM05D003801 ORTHO05D004812 9.3e-70 268.5 242 55.4
Sabra19G0124700 Salix brachista HOM05D003801 ORTHO05D004812 1.6e-69 267.7 237 58.6
Psat5g150840 Pisum sativum HOM05D003801 ORTHO05D004812 3.5e-69 266.5 244 55.7
Duzib168G2305 Durio zibethinus HOM05D003801 ORTHO05D004812 6.0e-69 265.8 240 57.1
EL10Ac7g15867 Beta vulgaris HOM05D003801 ORTHO05D004812 7.9e-69 265.4 244 55.7
Sabra13G0124100 Salix brachista HOM05D003801 ORTHO05D004812 1.0e-68 265.0 270 55.2
Sabra19G0125300 Salix brachista HOM05D003801 ORTHO05D004812 1.0e-68 265.0 236 58.5
MSTRG.17901 Avicennia marina HOM05D003801 ORTHO05D004812 3.0e-68 263.5 245 56.7
Nn1g08532 Nelumbo nucifera HOM05D003801 ORTHO05D004812 6.7e-68 262.3 244 55.7
A08p35840 Brassica napus HOM05D003801 ORTHO05D004812 8.7e-68 261.9 244 54.5
ClCG03G000210 Citrullus lanatus HOM05D003801 ORTHO05D004812 1.5e-67 261.2 244 57.0
BcaB03g13435 Brassica carinata HOM05D003801 ORTHO05D004812 1.9e-67 260.8 244 54.1
FvH4_3g40080 Fragaria vesca HOM05D003801 ORTHO05D004812 1.9e-67 260.8 244 57.0
C08p02740 Brassica napus HOM05D003801 ORTHO05D004812 2.5e-67 260.4 244 54.1
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 2.5e-67 260.4 244 54.1
BraA08t35491Z Brassica rapa HOM05D003801 ORTHO05D004812 2.5e-67 260.4 244 54.1
Aqoxy2G00749 Aquilegia oxysepala HOM05D003801 ORTHO05D004812 3.3e-67 260.0 249 55.0
CsaV3_1G036690 Cucumis sativus L. HOM05D003801 ORTHO05D004812 3.3e-67 260.0 244 56.6
AL1G16990 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 4.3e-67 259.6 244 54.1
Lj1A124T30 Lonicera japonica HOM05D003801 ORTHO05D004812 7.4e-67 258.8 241 56.0
BcaC05g24660 Brassica carinata HOM05D003801 ORTHO05D004812 1.3e-66 258.1 244 53.3
BolC5t29277H Brassica oleracea HOM05D003801 ORTHO05D004812 1.3e-66 258.1 244 53.3
CARHR006620 Cardamine hirsuta HOM05D003801 ORTHO05D004812 1.3e-66 258.1 244 54.1
Cpa.g.sc173.16 Carica papaya HOM05D003801 ORTHO05D004812 1.3e-66 258.1 244 55.7
Sp1g05660 Schrenkiella parvula HOM05D003801 ORTHO05D004812 1.3e-66 258.1 244 53.3
BraA10t42811Z Brassica rapa HOM05D003801 ORTHO05D004812 2.1e-66 257.3 244 52.9
Oeu044915.1 Olea europaea HOM05D003801 ORTHO05D004812 2.1e-66 257.3 245 55.5
ATR0584G141 Amborella trichopoda HOM05D003801 ORTHO05D004812 2.8e-66 256.9 244 55.7
Carub.0001s0624 Capsella rubella HOM05D003801 ORTHO05D004812 2.8e-66 256.9 244 53.3
MELO3C020500.2 Cucumis melo HOM05D003801 ORTHO05D004812 2.8e-66 256.9 244 55.7
Thhalv10006671m.g Eutrema salsugineum HOM05D003801 ORTHO05D004812 3.7e-66 256.5 244 53.3
AT1G06950 Arabidopsis thaliana HOM05D003801 ORTHO05D004812 4.8e-66 256.1 244 53.3
Medtr5g074690 Medicago truncatula HOM05D003801 ORTHO05D004812 4.8e-66 256.1 244 54.5
Medtr3g466170 Medicago truncatula HOM05D003801 ORTHO05D004812 6.2e-66 255.8 244 55.3
MD03G1058800 Malus domestica HOM05D003801 ORTHO05D004812 1.4e-65 254.6 244 54.9
Potri.019G127000 Populus trichocarpa HOM05D003801 ORTHO05D004812 1.8e-65 254.2 244 54.5
PSO339G0950 Papaver somniferum HOM05D003801 ORTHO05D004812 3.1e-65 253.4 175 74.3
Actinidia32598 Actinidia chinensis HOM05D003801 ORTHO05D004812 4.1e-65 253.1 248 54.4
MSTRG.18544 Avicennia marina HOM05D003801 ORTHO05D004812 4.1e-65 253.1 245 54.7
Cfa011800 Carpinus fangiana HOM05D003801 ORTHO05D004812 4.1e-65 253.1 247 55.1
Glyma.14G201500 Glycine max HOM05D003801 ORTHO05D004812 4.1e-65 253.1 244 53.7
TPR.G24942 Trifolium pratense HOM05D003801 ORTHO05D004812 4.1e-65 253.1 245 54.7
QL01p018072 Quercus lobata HOM05D003801 ORTHO05D004812 5.3e-65 252.7 244 53.7
Glyma.02G233700 Glycine max HOM05D003801 ORTHO05D004812 1.5e-64 251.1 244 53.7
Lalb_Chr10g0103681 Lupinus albus HOM05D003801 ORTHO05D004812 2.6e-64 250.4 244 52.9
Haze_24439 Corylus avellana HOM05D003801 ORTHO05D004812 5.8e-64 249.2 247 54.3
FAN21G1607 Fragaria x ananassa HOM05D003801 ORTHO05D004812 5.8e-64 249.2 266 52.3
MD11G1060900 Malus domestica HOM05D003801 ORTHO05D004812 5.8e-64 249.2 244 53.3
Rhsim13G0062300 Rhododendron simsii HOM05D003801 ORTHO05D004812 5.8e-64 249.2 228 58.3
FAN11G2663 Fragaria x ananassa HOM05D003801 ORTHO05D004812 7.6e-64 248.8 266 52.3
CSS0002946 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 2.9e-63 246.9 249 52.6
Cc01_g14930 Coffea canephora HOM05D003801 ORTHO05D004812 2.9e-63 246.9 244 55.7
Eucgr.I01027 Eucalyptus grandis HOM05D003801 ORTHO05D004812 2.9e-63 246.9 244 51.6
Nitab4.5_0004906g0050 Nicotiana tabacum HOM05D003801 ORTHO05D004812 2.9e-63 246.9 244 52.5
Hund05047 Selenicereus undatus HOM05D003801 ORTHO05D004812 2.9e-63 246.9 242 55.0
Sc17g0002560 Simmondsia chinensis HOM05D003801 ORTHO05D004812 5.0e-63 246.1 244 54.1
Phvul.008G250000 Phaseolus vulgaris HOM05D003801 ORTHO05D004812 6.5e-63 245.7 244 51.6
CiPaw.13G066600 Carya illinoinensis HOM05D003801 ORTHO05D004812 1.4e-62 244.6 244 54.1
Migut.D00836 Erythranthe guttata HOM05D003801 ORTHO05D004812 2.5e-62 243.8 245 52.7
SEGI_40714 Sequoiadendron giganteum HOM05D003801 ORTHO05D004812 2.5e-62 243.8 244 51.2
SGA_v2.0_scaffold20G09298 Striga asiatica HOM05D003801 ORTHO05D004812 4.2e-62 243.0 245 51.8
Dinv12255 Davidia involucrata HOM05D003801 ORTHO05D004812 5.5e-62 242.7 240 53.3
Cc01_g15070 Coffea canephora HOM05D003801 ORTHO05D004812 7.1e-62 242.3 244 55.3
Hma1.2p1_1637F.1_g294880 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 9.3e-62 241.9 244 52.5
CAN.G1702.5 Capsicum annuum HOM05D003801 ORTHO05D004812 1.2e-61 241.5 244 51.2
Peaxi162Scf00095g00168 Petunia axillaris HOM05D003801 ORTHO05D004812 2.1e-61 240.7 244 51.2
Sopen09g014770 Solanum pennellii HOM05D003801 ORTHO05D004812 4.6e-61 239.6 244 50.8
Dinv28708 Davidia involucrata HOM05D003801 ORTHO05D004812 7.9e-61 238.8 244 52.0
Eucgr.B04013 Eucalyptus grandis HOM05D003801 ORTHO05D004812 1.0e-60 238.4 244 50.8
Nitab4.5_0004637g0060 Nicotiana tabacum HOM05D003801 ORTHO05D004812 1.3e-60 238.0 244 52.0
Aa31LG5G6380 Aethionema arabicum HOM05D003801 ORTHO05D004812 8.7e-60 235.3 262 50.0
CANSAT54G0450 Cannabis sativa HOM05D003801 ORTHO05D004812 8.7e-60 235.3 244 50.8
Solyc09g031780.3 Solanum lycopersicum HOM05D003801 ORTHO05D004812 8.7e-60 235.3 244 50.8
DCAR_028861 Daucus carota HOM05D003801 ORTHO05D004812 1.1e-59 235.0 244 50.8
Nitab4.5_0000486g0130 Nicotiana tabacum HOM05D003801 ORTHO05D004812 1.1e-59 235.0 244 51.2
HPP92_014541 Vanilla planifolia HOM05D003801 ORTHO05D004812 5.7e-59 232.6 213 54.5
Glyma.18G055700 Glycine max HOM05D003801 ORTHO05D004812 7.4e-59 232.3 244 49.2
Lsat_1_v5_gn_9_14381 Lactuca sativa HOM05D003801 ORTHO05D004812 1.3e-58 231.5 244 49.2
A10p05480 Brassica napus HOM05D003801 ORTHO05D004812 2.2e-58 230.7 291 44.3
Mapoly0002s0142 Marchantia polymorpha HOM05D003801 ORTHO05D004812 1.8e-57 227.6 244 49.2
SMO347G0592 Selaginella moellendorffii HOM05D003801 ORTHO05D004812 1.5e-56 224.6 245 49.8
Pp3c14_10270 Physcomitrium patens HOM05D003801 ORTHO05D004812 3.4e-56 223.4 244 47.1
vmacro02901 Vaccinium macrocarpon HOM05D003801 ORTHO05D004812 3.4e-56 223.4 209 57.4
Ca_13017_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 4.5e-56 223.0 244 50.8
Os10g0492000 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 1.7e-55 221.1 242 50.8
Pp3c17_6540 Physcomitrium patens HOM05D003801 ORTHO05D004812 3.2e-54 216.9 244 44.7
unitig_747.g21451 Utricularia gibba HOM05D003801 ORTHO05D004812 3.2e-54 216.9 245 47.3
FAN16G2780 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.8e-52 211.1 266 47.0
Zm00001eb044910 Zea mays HOM05D003801 ORTHO05D004812 3.0e-52 210.3 240 49.6
arahy.Tifrunner.gnm1.ann1.Z7TKRX Arachis hypogaea HOM05D003801 ORTHO05D004812 2.0e-51 207.6 309 39.2
FAN25G2625 Fragaria x ananassa HOM05D003801 ORTHO05D004812 9.7e-51 205.3 266 46.2
Hma1.2p1_1421F.1_g282490 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 3.4e-48 196.8 178 56.7
Lj1A123G49 Lonicera japonica HOM05D003801 ORTHO05D004812 2.2e-47 194.1 175 56.6
CBR_g29785 Chara braunii HOM05D003801 ORTHO05D004812 9.4e-46 188.7 244 42.2
AL1G17110 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 1.1e-43 181.8 174 52.3
Sabra19G0125200 Salix brachista HOM05D003801 ORTHO05D004812 1.8e-41 174.5 297 39.1
Sabra19G0125100 Salix brachista HOM05D003801 ORTHO05D004812 8.0e-37 159.1 152 55.3
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 5.0e-31 139.8 104 68.3
SHI19243 Sapria himalayana HOM05D003801 ORTHO05D004812 7.2e-30 136.0 159 44.0
PRCOL_00000154 Prasinoderma coloniale HOM05D003801 ORTHO05D004812 1.2e-27 128.6 235 32.8
Lj6A615T91 Lonicera japonica HOM05D003801 ORTHO05D004812 3.7e-26 123.6 217 38.7
CSS0035288 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 3.5e-24 117.1 124 49.2
Oeu050039.1 Olea europaea HOM05D003801 ORTHO05D004812 5.5e-22 109.8 212 36.8
Os10g0492300 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 2.7e-21 107.5 134 43.3
MCO16G620 Micromonas commoda HOM05D003801 ORTHO05D004812 1.4e-20 105.1 177 35.6
CDE07G0033 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 1.5e-19 101.7 179 38.5
Cre10.g452450 Chlamydomonas reinhardtii HOM05D003801 ORTHO05D004812 1.0e-15 89.0 232 28.0
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 1.9e-14 84.7 99 47.5
CDE07G0490 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 7.2e-14 82.8 169 36.1
TAR629G1141 Trochodendron aralioides HOM05D000566 ORTHO05D000686 3.6e-13 80.5 90 50.0
BolC1t02191H Brassica oleracea HOM05D003801 ORTHO05D017532 6.1e-13 79.7 145 33.1
COL.COLO4_07614 Corchorus olitorius HOM05D003801 ORTHO05D004812 1.4e-12 78.6 61 60.7
C05p05030 Brassica napus HOM05D001129 ORTHO05D003814 5.2e-12 76.6 70 55.7
C01p22580 Brassica napus HOM05D003801 ORTHO05D017532 6.8e-12 76.3 133 34.6
BolC1t01884H Brassica oleracea HOM05D003801 ORTHO05D017532 8.9e-12 75.9 145 32.4
Glyma.11G162400 Glycine max HOM05D003801 ORTHO05D004812 1.8e-09 68.2 52 55.8
SHI19242 Sapria himalayana HOM05D003801 ORTHO05D004812 6.6e-07 59.7 74 43.2


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