Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 4.5e-101 371.3 197 100.0
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 6.6e-100 367.5 197 98.5
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 5.8e-80 301.2 196 81.1
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 2.7e-77 292.4 200 81.0
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 7.8e-77 290.8 197 78.7
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 1.0e-76 290.4 197 77.7
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 2.3e-76 289.3 196 77.6
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 3.0e-76 288.9 199 78.9
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 3.0e-76 288.9 199 78.9
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 1.1e-75 287.0 198 80.3
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 4.3e-75 285.0 197 75.6
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 5.6e-75 284.6 197 77.2
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 7.3e-75 284.3 195 78.5
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 9.6e-75 283.9 197 75.1
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.2e-74 283.5 196 76.5
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 1.2e-74 283.5 197 75.6
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 4.7e-74 281.6 196 76.0
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 4.7e-74 281.6 197 75.6
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 6.2e-74 281.2 197 75.6
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.4e-73 280.0 197 76.6
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 1.8e-73 279.6 195 77.4
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 3.1e-73 278.9 197 74.1
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 4.0e-73 278.5 199 74.9
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 6.8e-73 277.7 193 77.7
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 6.8e-73 277.7 196 75.5
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 6.8e-73 277.7 197 76.1
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.6e-72 275.8 198 76.3
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.6e-72 275.8 198 76.3
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.6e-72 275.8 198 76.3
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.6e-72 275.8 198 76.3
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 3.4e-72 275.4 197 74.1
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 4.4e-72 275.0 193 76.7
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 7.6e-72 274.2 197 73.6
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 9.9e-72 273.9 197 73.6
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 9.9e-72 273.9 197 74.1
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.3e-71 273.5 198 75.8
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.3e-71 273.5 198 75.8
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.3e-71 273.5 197 73.6
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.3e-71 273.5 197 73.6
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.3e-71 273.5 197 73.1
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.7e-71 273.1 198 74.2
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.7e-71 273.1 197 72.6
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 1.7e-71 273.1 205 75.1
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 2.2e-71 272.7 200 75.5
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 3.8e-71 271.9 200 75.5
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 8.4e-71 270.8 193 75.1
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 1.1e-70 270.4 200 74.5
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 1.1e-70 270.4 193 74.1
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 1.4e-70 270.0 198 74.2
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.9e-70 269.6 200 75.5
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 3.2e-70 268.9 197 73.1
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 5.4e-70 268.1 193 74.1
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 7.1e-70 267.7 201 72.1
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 7.1e-70 267.7 198 72.7
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 9.3e-70 267.3 198 73.7
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 1.2e-69 266.9 193 73.1
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.2e-69 266.9 200 75.0
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 1.2e-69 266.9 196 74.0
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 1.6e-69 266.5 200 74.5
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 2.1e-69 266.2 197 72.6
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 2.1e-69 266.2 195 72.8
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 2.1e-69 266.2 200 70.5
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 2.7e-69 265.8 198 71.7
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 6.0e-69 264.6 197 73.6
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 6.0e-69 264.6 195 72.3
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 7.8e-69 264.2 198 75.3
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.3e-68 263.5 195 71.8
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 3.0e-68 262.3 160 83.8
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 3.9e-68 261.9 197 72.6
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 6.6e-68 261.2 197 71.6
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 6.6e-68 261.2 197 74.1
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 8.7e-68 260.8 192 71.4
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 8.7e-68 260.8 197 70.1
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 1.1e-67 260.4 192 71.4
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 1.5e-67 260.0 192 71.4
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 5.6e-67 258.1 161 82.0
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 5.6e-67 258.1 198 70.7
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 7.3e-67 257.7 197 71.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 1.3e-66 256.9 198 71.7
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 2.8e-66 255.8 199 71.9
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 2.8e-66 255.8 211 65.9
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.1e-65 253.8 198 71.7
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.1e-65 253.8 197 70.6
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 1.8e-65 253.1 197 67.0
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 2.4e-65 252.7 202 72.3
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 5.3e-65 251.5 198 70.7
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 9.0e-65 250.8 200 68.0
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 2.0e-64 249.6 200 67.5
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 2.6e-64 249.2 150 85.3
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 5.8e-64 248.1 189 73.5
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 9.9e-64 247.3 164 75.6
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 4.9e-63 245.0 191 69.6
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.9e-62 243.0 197 69.0
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.9e-62 243.0 195 66.7
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 9.3e-62 240.7 197 65.5
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 3.9e-60 235.3 195 65.6
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 3.6e-58 228.8 195 60.0
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 8.1e-58 227.6 149 81.9
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 1.4e-46 190.3 207 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 1.9e-46 189.9 161 55.9
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 2.1e-45 186.4 141 70.9
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.1e-41 172.6 158 54.4
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.1e-41 172.6 158 54.4
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.1e-41 172.6 162 53.1
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.1e-41 172.6 162 53.1
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 1.0e-39 167.5 105 81.9
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 1.0e-39 167.5 159 52.2
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 1.7e-39 166.8 157 54.1
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 3.2e-38 162.5 103 79.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 3.0e-36 156.0 89 88.8
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-34 150.6 103 75.7
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.2e-34 149.8 102 78.4
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.1e-29 133.3 90 76.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.8e-28 130.2 114 64.9
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.1e-25 120.9 88 68.2
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 5.9e-24 115.2 71 80.3
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 4.2e-22 109.0 93 63.4
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 1.1e-19 100.9 149 35.6
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.7e-18 97.1 155 34.2
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 2.2e-18 96.7 92 60.9
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 1.4e-17 94.0 88 58.0
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 2.9e-15 86.3 162 30.9
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.1e-14 84.3 105 46.7
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 7.4e-11 71.6 43 79.1
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 9.7e-11 71.2 153 30.7
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.1e-09 66.2 44 63.6
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 6.5e-07 58.5 92 39.1
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-06 57.0 48 60.4


User provided reference genes

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