Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 4.9e-60 234.2 112 100.0
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 7.4e-40 167.2 110 67.3
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 3.7e-39 164.9 110 65.5
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 3.7e-39 164.9 105 70.5
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 1.4e-38 162.9 105 68.6
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 1.4e-38 162.9 105 68.6
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 5.3e-38 161.0 110 64.5
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-37 159.5 109 67.0
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-37 159.5 109 67.0
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 2.2e-36 155.6 109 64.2
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 3.6e-34 148.3 113 62.8
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 3.6e-34 148.3 112 64.3
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 3.9e-33 144.8 109 62.4
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 7.4e-24 114.0 106 52.8
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.7e-23 112.8 106 52.8
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 1.3e-20 103.2 98 50.0
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.2e-18 96.7 101 51.5
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 2.1e-18 95.9 102 50.0
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 2.1e-18 95.9 100 53.0
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 6.1e-18 94.4 101 49.5
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 1.8e-17 92.8 100 45.0
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 4.0e-17 91.7 100 44.0
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 3.3e-16 88.6 101 44.6
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 1.3e-15 86.7 107 39.3
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 1.3e-15 86.7 107 39.3
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 1.3e-15 86.7 107 39.3
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.3e-15 86.7 101 47.5
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.2e-15 85.9 102 45.1
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 2.2e-15 85.9 106 39.6
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 2.2e-15 85.9 103 40.8
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 3.7e-15 85.1 101 41.6
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 4.8e-15 84.7 101 45.5
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 4.8e-15 84.7 99 40.4
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 1.4e-14 83.2 101 40.6
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 1.4e-14 83.2 101 44.6
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.4e-14 82.4 100 40.0
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.4e-14 82.4 100 40.0
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 2.4e-14 82.4 101 39.6
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 3.1e-14 82.0 101 38.6
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 3.1e-14 82.0 101 39.6
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 5.3e-14 81.3 101 37.6
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 5.3e-14 81.3 102 42.2
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 7.0e-14 80.9 102 42.2
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 9.1e-14 80.5 103 35.0
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 9.1e-14 80.5 102 41.2
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 1.2e-13 80.1 100 40.0
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.2e-13 80.1 101 38.6
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 1.6e-13 79.7 101 42.6
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 1.6e-13 79.7 101 42.6
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.0e-13 79.3 100 41.0
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 3.5e-13 78.6 101 39.6
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 3.5e-13 78.6 109 36.7
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 3.5e-13 78.6 101 40.6
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.5e-13 78.6 99 38.4
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 4.5e-13 78.2 103 37.9
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 4.5e-13 78.2 103 37.9
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 4.5e-13 78.2 101 40.6
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 7.7e-13 77.4 109 37.6
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.7e-13 77.4 101 36.6
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.7e-13 77.4 101 36.6
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 7.7e-13 77.4 101 39.6
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 1.0e-12 77.0 101 39.6
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.0e-12 77.0 100 39.0
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.0e-12 77.0 100 40.0
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.0e-12 77.0 100 40.0
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.3e-12 76.6 109 37.6
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 1.3e-12 76.6 102 38.2
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 1.7e-12 76.3 107 34.6
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 2.2e-12 75.9 108 39.8
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 2.2e-12 75.9 99 36.4
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.2e-12 75.9 102 38.2
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 2.2e-12 75.9 100 39.0
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 2.9e-12 75.5 106 35.8
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 3.8e-12 75.1 100 36.0
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 3.8e-12 75.1 102 37.3
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 3.8e-12 75.1 102 37.3
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 3.8e-12 75.1 100 39.0
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 5.0e-12 74.7 107 40.2
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 5.0e-12 74.7 108 38.9
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 5.0e-12 74.7 101 37.6
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 5.0e-12 74.7 107 35.5
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 6.5e-12 74.3 108 38.9
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 6.5e-12 74.3 108 38.9
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 8.5e-12 73.9 114 36.0
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.1e-11 73.6 101 37.6
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 1.5e-11 73.2 101 37.6
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 1.5e-11 73.2 99 36.4
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 1.5e-11 73.2 114 36.0
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 1.9e-11 72.8 103 35.9
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 1.9e-11 72.8 101 35.6
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 2.5e-11 72.4 103 35.9
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 2.5e-11 72.4 101 35.6
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 2.5e-11 72.4 101 36.6
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.2e-11 72.0 114 35.1
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 4.2e-11 71.6 101 32.7
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 7.2e-11 70.9 102 35.3
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 9.4e-11 70.5 101 34.7
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 9.4e-11 70.5 102 38.2
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 1.2e-10 70.1 101 33.7
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 1.2e-10 70.1 110 33.6
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 1.2e-10 70.1 107 36.4
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 1.6e-10 69.7 103 35.0
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 1.6e-10 69.7 107 35.5
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 2.1e-10 69.3 97 33.0
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 2.7e-10 68.9 102 39.2
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 3.6e-10 68.6 103 38.8
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.6e-10 68.6 103 34.0
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 3.6e-10 68.6 95 34.7
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 6.1e-10 67.8 101 31.7
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.1e-10 67.8 101 31.7
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.0e-09 67.0 102 37.3
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.0e-09 67.0 101 33.7
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 1.0e-09 67.0 100 33.0
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 1.4e-09 66.6 102 37.3
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 1.4e-09 66.6 106 33.0
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 1.4e-09 66.6 103 35.9
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 2.3e-09 65.9 102 34.3
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 2.3e-09 65.9 102 36.3
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 3.0e-09 65.5 101 34.7
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 4.0e-09 65.1 102 31.4
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.0e-09 65.1 102 31.4
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 4.0e-09 65.1 103 35.0
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 4.0e-09 65.1 104 33.7
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 4.0e-09 65.1 100 39.0
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 5.2e-09 64.7 102 41.2
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 5.2e-09 64.7 105 34.3
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 6.8e-09 64.3 111 33.3
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 8.8e-09 63.9 104 36.5
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 2.0e-08 62.8 101 37.6
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 2.6e-08 62.4 102 34.3
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.4e-08 61.6 98 33.7
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.7e-07 59.7 100 32.0
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 2.2e-07 59.3 112 30.4
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 1.4e-06 56.6 77 35.1
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 5.4e-06 54.7 77 33.8
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 7.0e-06 54.3 99 31.3


User provided reference genes

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