Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2985 Papaver somniferum HOM05D004778 ORTHO05D005679 5.5e-21 103.6 61 100.0
PSO384G3806 Papaver somniferum HOM05D004778 ORTHO05D005679 7.9e-20 99.8 61 96.7
PSO339G4337 Papaver somniferum HOM05D004778 ORTHO05D005679 2.3e-11 71.6 59 72.9
PSO384G2791 Papaver somniferum HOM05D004778 ORTHO05D005679 6.7e-11 70.1 59 71.2
PSO384G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 8.8e-11 69.7 59 69.5
PSO339G3914 Papaver somniferum HOM05D004778 ORTHO05D005679 1.1e-10 69.3 62 75.8
PSO339G1550 Papaver somniferum HOM05D004778 ORTHO05D005679 2.0e-10 68.6 59 67.8
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 2.6e-10 68.2 57 66.7
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 3.3e-10 67.8 57 70.2
TWI32G0653 Tripterygium wilfordii HOM05D004778 ORTHO05D005679 3.3e-10 67.8 55 67.3
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 4.4e-10 67.4 57 66.7
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 5.7e-10 67.0 57 70.2
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 5.7e-10 67.0 57 70.2
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 5.7e-10 67.0 56 71.4
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 7.4e-10 66.6 61 68.9
PSO339G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 7.4e-10 66.6 59 69.5
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 9.7e-10 66.2 57 70.2
TAR623G1546 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.3e-09 65.9 57 63.2
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 2.2e-09 65.1 57 64.9
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 2.2e-09 65.1 57 66.7
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 2.8e-09 64.7 56 66.1
CANSAT78G1478 Cannabis sativa HOM05D004778 ORTHO05D005679 4.8e-09 63.9 57 66.7
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 8.2e-09 63.2 57 64.9
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 2.4e-08 61.6 57 64.9
Cfa001534 Carpinus fangiana HOM05D004778 ORTHO05D005679 3.1e-08 61.2 58 69.0
AT4G26320 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 1.5e-07 58.9 57 59.6
COL.COLO4_36083 Corchorus olitorius HOM05D004778 ORTHO05D005679 2.0e-07 58.5 57 64.9
AL7G26630 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 2.6e-07 58.2 57 59.6
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 3.4e-07 57.8 57 61.4
Eucgr.K01501 Eucalyptus grandis HOM05D004778 ORTHO05D005679 5.9e-07 57.0 58 62.1
PGR142G3834 Punica granatum HOM05D004778 ORTHO05D005679 5.9e-07 57.0 62 61.3
CARHR233890 Cardamine hirsuta HOM05D004778 ORTHO05D005679 7.7e-07 56.6 57 57.9
Thhalv10027232m.g Eutrema salsugineum HOM05D004778 ORTHO05D005679 1.0e-06 56.2 57 56.1
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 1.0e-06 56.2 57 59.6
Prupe.6G003500 Prunus persica HOM05D004778 ORTHO05D005679 1.0e-06 56.2 58 62.1
Aqoxy2G00513 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 1.3e-06 55.8 56 57.1
Sabra19G0043900 Salix brachista HOM05D004778 ORTHO05D005679 1.7e-06 55.5 58 62.1
Sabra19G0047200 Salix brachista HOM05D004778 ORTHO05D005679 1.7e-06 55.5 58 62.1
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 2.9e-06 54.7 57 57.9
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 2.9e-06 54.7 57 59.6
MD03G1004000 Malus domestica HOM05D004778 ORTHO05D005679 2.9e-06 54.7 58 58.6
Rhsim13G0232700 Rhododendron simsii HOM05D004778 ORTHO05D005679 3.8e-06 54.3 58 60.3
Nitab4.5_0000394g0080 Nicotiana tabacum HOM05D004778 ORTHO05D005679 8.5e-06 53.1 53 56.6


User provided reference genes

Program Settings