Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2910 Papaver somniferum HOM05D007521 ORTHO05D009387 2.5e-130 468.8 238 100.0
PSO384G1785 Papaver somniferum HOM05D007521 ORTHO05D009387 1.0e-118 430.3 234 92.7
TAR636G2090 Trochodendron aralioides HOM05D007521 ORTHO05D009387 1.8e-80 303.1 242 64.9
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 2.9e-78 295.8 216 68.1
GSVIVG01032870001 Vitis vinifera HOM05D007521 ORTHO05D009387 2.9e-70 269.2 228 61.0
Prupe.2G267400 Prunus persica HOM05D007521 ORTHO05D009387 3.7e-65 252.3 216 61.6
Dinv34514 Davidia involucrata HOM05D007521 ORTHO05D009387 6.3e-65 251.5 243 58.0
MD07G1238600 Malus domestica HOM05D007521 ORTHO05D009387 3.1e-64 249.2 232 57.8
CiPaw.08G156100 Carya illinoinensis HOM05D007521 ORTHO05D009387 9.2e-64 247.7 240 56.2
Nitab4.5_0011372g0030 Nicotiana tabacum HOM05D007521 ORTHO05D009387 5.9e-63 245.0 237 56.1
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 2.3e-62 243.0 232 57.8
Potri.019G065400 Populus trichocarpa HOM05D007521 ORTHO05D009387 2.3e-62 243.0 232 56.9
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 4.3e-61 238.8 242 56.2
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 4.3e-61 238.8 232 53.4
PGSC0003DMG400011658 Solanum tuberosum HOM05D007521 ORTHO05D009387 5.6e-61 238.4 234 54.7
Aqoxy4G03316 Aquilegia oxysepala HOM05D007521 ORTHO05D009387 9.5e-61 237.7 213 60.1
Lalb_Chr11g0067611 Lupinus albus HOM05D007521 ORTHO05D009387 2.8e-60 236.1 209 57.4
FvH4_7g26320 Fragaria vesca HOM05D007521 ORTHO05D009387 4.7e-60 235.3 220 55.9
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 6.1e-60 235.0 189 60.8
QL08p065346 Quercus lobata HOM05D007521 ORTHO05D009387 6.1e-60 235.0 228 54.4
FAN10G3062 Fragaria x ananassa HOM05D007521 ORTHO05D009387 3.1e-59 232.6 220 55.5
RcHm_v2.0_Chr1g0372781 Rosa chinensis HOM05D007521 ORTHO05D009387 2.0e-58 229.9 218 54.6
Gorai.009G291900 Gossypium raimondii HOM05D007521 ORTHO05D009387 4.4e-58 228.8 225 53.3
Gohir.A05G276700 Gossypium hirsutum HOM05D007521 ORTHO05D009387 7.5e-58 228.0 225 52.9
FAN06G0083 Fragaria x ananassa HOM05D007521 ORTHO05D009387 9.8e-58 227.6 229 53.7
Gohir.D05G278400 Gossypium hirsutum HOM05D007521 ORTHO05D009387 1.7e-57 226.9 225 52.4
Nitab4.5_0000375g0330 Nicotiana tabacum HOM05D007521 ORTHO05D009387 1.7e-57 226.9 249 52.2
TWI09G0709 Tripterygium wilfordii HOM05D007521 ORTHO05D009387 1.7e-57 226.9 217 55.8
MSTRG.8869 Avicennia marina HOM05D007521 ORTHO05D009387 1.9e-56 223.4 250 50.8
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 2.4e-56 223.0 214 58.4
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 2.4e-56 223.0 214 57.0
PGR142G4361 Punica granatum HOM05D007521 ORTHO05D009387 2.4e-56 223.0 228 52.6
Thecc.10G187600 Theobroma cacao HOM05D007521 ORTHO05D009387 3.2e-56 222.6 217 55.8
Cpa.g.sc65.80 Carica papaya HOM05D007521 ORTHO05D009387 4.1e-56 222.2 203 55.7
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 7.0e-56 221.5 231 52.4
Medtr3g093540 Medicago truncatula HOM05D007521 ORTHO05D009387 7.0e-56 221.5 209 56.9
Duzib114G0131 Durio zibethinus HOM05D007521 ORTHO05D009387 9.2e-56 221.1 217 53.5
Sabra19G0079100 Salix brachista HOM05D007521 ORTHO05D009387 1.6e-55 220.3 223 55.2
ECA233G6052 Erigeron canadensis HOM05D007521 ORTHO05D009387 2.0e-55 219.9 229 52.8
Eucgr.G03172 Eucalyptus grandis HOM05D007521 ORTHO05D009387 2.7e-55 219.5 244 54.1
CANSAT56G2803 Cannabis sativa HOM05D007521 ORTHO05D009387 3.5e-55 219.2 238 50.4
Ca_16847_v3 Cicer arietinum L. HOM05D006307 ORTHO05D008123 1.0e-54 217.6 190 59.5
CiPaw.08G155800 Carya illinoinensis HOM05D007521 ORTHO05D009387 1.3e-54 217.2 229 54.1
TPR.G13979 Trifolium pratense HOM05D007521 ORTHO05D009387 1.3e-54 217.2 209 53.6
Actinidia31757 Actinidia chinensis HOM05D007521 ORTHO05D009387 8.6e-54 214.5 212 55.7
ATR1127G230 Amborella trichopoda HOM05D007521 ORTHO05D009387 1.1e-53 214.2 223 52.9
HanXRQChr08g0223011 Helianthus annuus HOM05D007521 ORTHO05D009387 1.5e-53 213.8 215 54.0
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 6.2e-52 208.4 231 51.1
Psat5g070120 Pisum sativum HOM05D007521 ORTHO05D009387 1.2e-50 204.1 209 52.6
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 2.0e-50 203.4 207 53.6
Atru.BG.268.p Acer truncatum HOM05D007521 ORTHO05D009387 3.4e-50 202.6 194 55.2
Hma1.2p1_0264F.1_g105770 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 5.8e-50 201.8 227 51.5
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 1.1e-48 197.6 184 59.2
VMungo1309G1947 Vigna mungo HOM05D006307 ORTHO05D008123 1.2e-47 194.1 192 53.1
EL10Ac2g02694 Beta vulgaris HOM05D007521 ORTHO05D009387 2.7e-47 193.0 241 52.3
Glyma.04G224700 Glycine max HOM05D007521 ORTHO05D009387 3.5e-47 192.6 198 53.5
SGA_v2.0_scaffold60G20871 Striga asiatica HOM05D006307 ORTHO05D008123 7.8e-47 191.4 243 49.0
Phvul.009G041300 Phaseolus vulgaris HOM05D007521 ORTHO05D009387 3.0e-46 189.5 206 52.9
C01p13990 Brassica napus HOM05D007521 ORTHO05D009387 8.6e-46 188.0 199 50.3
BolC1t01366H Brassica oleracea HOM05D007521 ORTHO05D009387 8.6e-46 188.0 199 50.3
Carub.0007s2116 Capsella rubella HOM05D007521 ORTHO05D009387 7.3e-45 184.9 199 50.3
AL7G33920 Arabidopsis lyrata HOM05D007521 ORTHO05D009387 1.2e-44 184.1 198 50.0
unitig_37.g11916 Utricularia gibba HOM05D007521 ORTHO05D009387 1.2e-44 184.1 209 49.3
A01p11790 Brassica napus HOM05D007521 ORTHO05D009387 3.6e-44 182.6 188 51.1
THA.LOC104811673 Tarenaya hassleriana HOM05D007521 ORTHO05D009387 4.7e-44 182.2 190 51.1
CDE11G1245 Ceratophyllum demersum HOM05D007521 ORTHO05D009387 8.1e-44 181.4 160 58.8
BraA01t01121Z Brassica rapa HOM05D007521 ORTHO05D009387 1.1e-43 181.0 191 50.3
Sp7g18440 Schrenkiella parvula HOM05D007521 ORTHO05D009387 3.1e-43 179.5 208 47.6
BcaC09g51354 Brassica carinata HOM05D007521 ORTHO05D009387 6.8e-43 178.3 191 50.3
DCAR_018052 Daucus carota HOM05D006307 ORTHO05D009387 1.2e-42 177.6 186 57.0
Aa31LG6G2400 Aethionema arabicum HOM05D007521 ORTHO05D009387 1.5e-42 177.2 214 44.9
Peaxi162Scf00167g01120 Petunia axillaris HOM05D007521 ORTHO05D009387 5.8e-42 175.3 189 50.8
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 2.2e-41 173.3 196 51.0
BcaNung01738 Brassica carinata HOM05D007521 ORTHO05D009387 1.4e-40 170.6 210 46.2
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea HOM05D006307 ORTHO05D008123 5.4e-40 168.7 208 49.0
CARHR226760 Cardamine hirsuta HOM05D007521 ORTHO05D009387 1.6e-39 167.2 206 45.1
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 1.7e-38 163.7 190 49.5
Lj8C51T1 Lonicera japonica HOM05D007521 ORTHO05D009387 3.8e-33 146.0 142 55.6
Cfa001178 Carpinus fangiana HOM05D007521 ORTHO05D009387 1.4e-32 144.1 133 57.9
Sopen05g030700 Solanum pennellii HOM05D007521 ORTHO05D009387 5.4e-32 142.1 146 51.4
Solyc05g052170.4 Solanum lycopersicum HOM05D007521 ORTHO05D009387 6.0e-31 138.7 146 50.0
Oeu001369.2 Olea europaea HOM05D007521 ORTHO05D009387 1.9e-29 133.7 126 54.8
Mapoly0070s0078 Marchantia polymorpha HOM05D007521 ORTHO05D009387 6.9e-27 125.2 222 37.4
Actinidia07775 Actinidia chinensis HOM05D007521 ORTHO05D009387 2.9e-25 119.8 171 43.9
Manes.10G004400 Manihot esculenta HOM05D007521 ORTHO05D009387 4.9e-25 119.0 141 52.5
COL.COLO4_19497 Corchorus olitorius HOM05D007521 ORTHO05D009387 2.4e-24 116.7 147 48.3
Pp3c3_11210 Physcomitrium patens HOM05D007521 ORTHO05D009387 2.7e-23 113.2 192 36.5
AT4G19985 Arabidopsis thaliana HOM05D007521 ORTHO05D009387 4.6e-23 112.5 139 48.9
Ah.12g064700 Amaranthus hybridus HOM05D007521 ORTHO05D009387 5.6e-21 105.5 88 62.5
SMO356G0638 Selaginella moellendorffii HOM05D007521 ORTHO05D009387 9.6e-21 104.8 186 37.6
Thhalv10026093m.g Eutrema salsugineum HOM05D007521 ORTHO05D009387 2.1e-20 103.6 135 46.7
AagrBONN_evm.TU.Sc2ySwM_228.2023 Anthoceros agrestis HOM05D007521 ORTHO05D009387 3.6e-20 102.8 190 34.2
Hund13426 Selenicereus undatus HOM05D007521 ORTHO05D009387 8.1e-20 101.7 208 36.5
SEGI_30344 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 1.1e-19 101.3 162 40.7
Gohir.D10G155835 Gossypium hirsutum HOM05D007521 ORTHO05D009387 6.9e-19 98.6 79 59.5
Hma1.2p1_0264F.1_g105790 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 2.1e-15 87.0 106 50.0
Gorai.011G175800 Gossypium raimondii HOM05D007521 ORTHO05D009387 4.6e-15 85.9 77 54.5
Hma1.2p1_0264F.1_g105780 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 5.1e-14 82.4 63 63.5
CDE04G1691 Ceratophyllum demersum HOM05D000172 ORTHO05D000273 6.7e-14 82.0 104 49.0
Actinidia01020 Actinidia chinensis HOM05D007521 ORTHO05D009387 8.7e-14 81.6 88 48.9
CBR_g4502 Chara braunii HOM05D007521 ORTHO05D009387 1.6e-12 77.4 83 47.0
Gorai.007G054900 Gossypium raimondii HOM05D007521 ORTHO05D009387 1.6e-12 77.4 69 50.7
Gohir.D11G050600 Gossypium hirsutum HOM05D007521 ORTHO05D009387 2.1e-12 77.0 66 54.5
Cre10.g464264 Chlamydomonas reinhardtii HOM05D007521 ORTHO05D009387 8.1e-12 75.1 88 43.2
SEGI_20264 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 4.9e-09 65.9 70 45.7
Migut.J00015 Erythranthe guttata HOM05D003003 ORTHO05D008343 1.8e-06 57.4 78 35.9
ClCG04G006230 Citrullus lanatus HOM05D003003 ORTHO05D008343 3.0e-06 56.6 81 35.8
MCO10G123 Micromonas commoda HOM05D003003 ORTHO05D009387 3.9e-06 56.2 78 38.5
FAN14G2421 Fragaria x ananassa HOM05D003003 ORTHO05D008343 5.1e-06 55.8 72 37.5
CsaV3_4G027340 Cucumis sativus L. HOM05D003003 ORTHO05D008343 6.7e-06 55.5 81 34.6
MD12G1192400 Malus domestica HOM05D003003 ORTHO05D008343 6.7e-06 55.5 75 34.7
Solyc10g074910.2 Solanum lycopersicum HOM05D003003 ORTHO05D008343 6.7e-06 55.5 72 34.7
Sopen10g027400 Solanum pennellii HOM05D003003 ORTHO05D008343 6.7e-06 55.5 72 34.7
Dinv16947 Davidia involucrata HOM05D003003 ORTHO05D008343 8.7e-06 55.1 92 32.6
PGR004G0262 Punica granatum HOM05D003003 ORTHO05D008343 8.7e-06 55.1 72 36.1
Hund19741 Selenicereus undatus HOM05D003003 ORTHO05D008343 8.7e-06 55.1 72 36.1


User provided reference genes

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