Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2776 Papaver somniferum HOM05D003064 ORTHO05D001733 1.4e-72 276.2 138 100.0
MBI13_g29645_MAGBIO Magnolia biondii HOM05D003064 ORTHO05D001733 2.6e-18 95.9 105 48.6
TAR633G2572 Trochodendron aralioides HOM05D003064 ORTHO05D001733 4.1e-16 88.6 114 45.6
Haze_22990 Corylus avellana HOM05D003064 ORTHO05D001733 1.1e-13 80.5 105 47.6
Ah.06g193080 Amaranthus hybridus HOM05D003064 ORTHO05D001733 3.3e-13 79.0 101 39.6
Cfa009621 Carpinus fangiana HOM05D003064 ORTHO05D001733 3.3e-13 79.0 105 47.6
EL10Ac4g10343 Beta vulgaris HOM05D003064 ORTHO05D001733 5.6e-13 78.2 96 42.7
Sabra03G0161100 Salix brachista HOM05D000664 ORTHO05D001733 5.6e-13 78.2 108 43.5
Potri.003G216000 Populus trichocarpa HOM05D003064 ORTHO05D001733 7.3e-13 77.8 105 42.9
Ciclev10017225m.g Citrus clementina HOM05D003064 ORTHO05D001733 3.6e-12 75.5 114 43.0
Manes.15G104400 Manihot esculenta HOM05D003064 ORTHO05D001733 6.2e-12 74.7 113 40.7
Thecc.09G214600 Theobroma cacao HOM05D003064 ORTHO05D001733 6.2e-12 74.7 105 42.9
Prupe.6G010800 Prunus persica HOM05D003064 ORTHO05D001733 8.1e-12 74.3 114 39.5
arahy.Tifrunner.gnm1.ann1.0YUQ4V Arachis hypogaea HOM05D003064 ORTHO05D001733 1.1e-11 73.9 120 42.5
arahy.Tifrunner.gnm1.ann1.MW6VFJ Arachis hypogaea HOM05D003064 ORTHO05D001733 1.1e-11 73.9 120 42.5
AUR62019204 Chenopodium quinoa HOM05D003064 ORTHO05D001733 1.1e-11 73.9 105 41.0
Potri.001G009300 Populus trichocarpa HOM05D003064 ORTHO05D001733 1.4e-11 73.6 108 45.4
QL01p010317 Quercus lobata HOM05D003064 ORTHO05D001733 1.4e-11 73.6 114 41.2
COL.COLO4_10451 Corchorus olitorius HOM05D003064 ORTHO05D001733 3.1e-11 72.4 105 43.8
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 3.1e-11 72.4 108 42.6
CiPaw.13G171900 Carya illinoinensis HOM05D003064 ORTHO05D001733 4.0e-11 72.0 114 42.1
Ca_18172_v3 Cicer arietinum L. HOM05D003064 ORTHO05D001733 4.0e-11 72.0 114 43.0
MD03G1010900 Malus domestica HOM05D003064 ORTHO05D001733 4.0e-11 72.0 114 38.6
TPR.G9574 Trifolium pratense HOM05D003064 ORTHO05D001733 6.8e-11 71.2 120 41.7
AUR62000034 Chenopodium quinoa HOM05D003064 ORTHO05D001733 8.9e-11 70.9 105 40.0
Glyma.08G097000 Glycine max HOM05D003064 ORTHO05D001733 8.9e-11 70.9 114 40.4
Phvul.002G181000 Phaseolus vulgaris HOM05D003064 ORTHO05D001733 1.5e-10 70.1 115 43.5
Eucgr.B03629 Eucalyptus grandis HOM05D003064 ORTHO05D001733 2.0e-10 69.7 112 39.3
Glyma.05G141600 Glycine max HOM05D003064 ORTHO05D001733 2.0e-10 69.7 114 40.4
Duzib168G1091 Durio zibethinus HOM05D003064 ORTHO05D001733 2.6e-10 69.3 92 43.5
Psat7g081160 Pisum sativum HOM05D003064 ORTHO05D001733 3.4e-10 68.9 120 40.0
MD11G1012700 Malus domestica HOM05D003064 ORTHO05D001733 5.8e-10 68.2 105 42.9
Atru.chr3.2225 Acer truncatum HOM05D003064 ORTHO05D001733 9.8e-10 67.4 105 42.9
PGR102G1745 Punica granatum HOM05D003064 ORTHO05D001733 1.3e-09 67.0 118 39.0
CSS0011912 Camellia sinensis var. sinensis HOM05D003064 ORTHO05D001733 2.2e-09 66.2 101 43.6
FvH4_3g44720 Fragaria vesca HOM05D003064 ORTHO05D001733 2.2e-09 66.2 89 39.3
VMungo0251G1179 Vigna mungo HOM05D003064 ORTHO05D001733 2.9e-09 65.9 89 42.7
FAN21G0865 Fragaria x ananassa HOM05D000001 ORTHO05D010412 4.9e-09 65.1 121 36.4
CiPaw.12G019000 Carya illinoinensis HOM05D003064 ORTHO05D001733 6.4e-09 64.7 105 37.1
RcHm_v2.0_Chr5g0081381 Rosa chinensis HOM05D003064 ORTHO05D001733 8.3e-09 64.3 114 36.8
Lalb_Chr07g0187611 Lupinus albus HOM05D003064 ORTHO05D001733 1.1e-08 63.9 113 40.7
FAN25G0198 Fragaria x ananassa HOM05D000001 ORTHO05D010412 1.4e-08 63.5 121 37.2
Actinidia06296 Actinidia chinensis HOM05D003064 ORTHO05D001733 2.4e-08 62.8 82 46.3
Lsat_1_v5_gn_2_101540 Lactuca sativa HOM05D003064 ORTHO05D001733 9.2e-08 60.8 101 35.6
FAN16G2075 Fragaria x ananassa HOM05D003064 ORTHO05D001733 2.1e-07 59.7 73 43.8
Ciclev10018265m.g Citrus clementina HOM05D003064 ORTHO05D001733 2.7e-07 59.3 80 42.5
FAN11G2614 Fragaria x ananassa HOM05D003064 ORTHO05D001733 2.7e-07 59.3 73 43.8
TAR369G0713 Trochodendron aralioides HOM05D003064 ORTHO05D001733 7.8e-07 57.8 47 51.1
Medtr2g062220 Medicago truncatula HOM05D003064 ORTHO05D001733 1.3e-06 57.0 91 33.0
Sed0020809 Sechium edule HOM05D003064 ORTHO05D001733 3.0e-06 55.8 83 42.2
DCAR_024359 Daucus carota HOM05D003064 ORTHO05D001733 3.9e-06 55.5 66 48.5
MELO3C000306.2 Cucumis melo HOM05D003064 ORTHO05D001733 5.1e-06 55.1 76 43.4
CsaV3_1G042240 Cucumis sativus L. HOM05D003064 ORTHO05D001733 5.1e-06 55.1 76 43.4
TWI38G0681 Tripterygium wilfordii HOM05D003064 ORTHO05D001733 5.1e-06 55.1 93 28.0
Atru.chr11.2712 Acer truncatum HOM05D003064 ORTHO05D001733 6.6e-06 54.7 49 49.0
ClCG03G013980 Citrullus lanatus HOM05D003064 ORTHO05D001733 8.6e-06 54.3 72 45.8
GSVIVG01001351001 Vitis vinifera HOM05D003064 ORTHO05D001733 8.6e-06 54.3 86 33.7


User provided reference genes

Program Settings