Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2774 Papaver somniferum HOM05D004113 ORTHO05D005233 6.0e-106 387.5 194 100.0
PSO837G0029 Papaver somniferum HOM05D004113 ORTHO05D005233 3.4e-48 195.7 148 65.5
PSO339G1590 Papaver somniferum HOM05D004113 ORTHO05D005233 2.4e-46 189.5 144 64.6
PSO384G1499 Papaver somniferum HOM05D004113 ORTHO05D005233 1.2e-45 187.2 148 64.9
PSO017G1826 Papaver somniferum HOM05D004113 ORTHO05D005233 1.9e-43 179.9 148 62.2
PSO017G6365 Papaver somniferum HOM05D004113 ORTHO05D005233 3.4e-32 142.5 150 50.7
PSO339G0814 Papaver somniferum HOM05D004113 ORTHO05D005233 9.8e-32 141.0 148 53.4
PSO837G0030 Papaver somniferum HOM05D004113 ORTHO05D005233 2.1e-29 133.3 138 47.8
PSO724G0052 Papaver somniferum HOM05D004113 ORTHO05D005233 2.2e-23 113.2 140 43.6
PSO724G0234 Papaver somniferum HOM05D004113 ORTHO05D005233 2.2e-23 113.2 140 43.6
PSO837G0066 Papaver somniferum HOM05D004113 ORTHO05D005233 3.2e-22 109.4 146 43.2
PSO017G2443 Papaver somniferum HOM05D004113 ORTHO05D005233 9.2e-22 107.8 146 42.5
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 2.3e-20 103.2 139 40.3
MD01G1038300 Malus domestica HOM05D004113 ORTHO05D005233 7.6e-16 88.2 140 35.7
Prupe.6G197400 Prunus persica HOM05D004113 ORTHO05D005233 2.2e-15 86.7 140 35.7
RcHm_v2.0_Chr2g0120401 Rosa chinensis HOM05D004113 ORTHO05D005233 8.4e-15 84.7 139 33.8
Nn5g28620 Nelumbo nucifera HOM05D004113 ORTHO05D005233 1.1e-14 84.3 142 32.4
CANSAT01G1731 Cannabis sativa HOM05D004113 ORTHO05D005233 2.4e-14 83.2 140 33.6
Dinv06063 Davidia involucrata HOM05D004113 ORTHO05D005233 2.4e-14 83.2 142 31.0
CANSAT01G2965 Cannabis sativa HOM05D004113 ORTHO05D005233 3.2e-14 82.8 140 33.6
TAR628G1510 Trochodendron aralioides HOM05D004113 ORTHO05D005233 4.2e-14 82.4 142 31.7
VMungo1309G2376 Vigna mungo HOM05D004113 ORTHO05D005233 4.2e-14 82.4 139 33.1
FvH4_1g24160 Fragaria vesca HOM05D004113 ORTHO05D005233 5.4e-14 82.0 139 32.4
FAN19G1994 Fragaria x ananassa HOM05D004113 ORTHO05D005233 5.4e-14 82.0 139 32.4
Glyma.04G214000 Glycine max HOM05D004113 ORTHO05D005233 5.4e-14 82.0 139 33.1
Duzib147G1472 Durio zibethinus HOM05D004113 ORTHO05D005233 1.2e-13 80.9 139 32.4
FAN26G3157 Fragaria x ananassa HOM05D004113 ORTHO05D005233 1.2e-13 80.9 139 32.4
RhsimUnG0017500 Rhododendron simsii HOM05D004113 ORTHO05D005233 1.2e-13 80.9 142 30.3
FAN16G3582 Fragaria x ananassa HOM05D004113 ORTHO05D005233 1.6e-13 80.5 139 32.4
Phvul.009G149400 Phaseolus vulgaris HOM05D004113 ORTHO05D005233 1.6e-13 80.5 139 32.4
Ca_16933_v3 Cicer arietinum L. HOM05D004113 ORTHO05D005233 2.1e-13 80.1 139 30.9
Migut.H00735 Erythranthe guttata HOM05D004113 ORTHO05D005233 2.1e-13 80.1 171 31.0
RhsimUnG0133000 Rhododendron simsii HOM05D004113 ORTHO05D005233 2.1e-13 80.1 142 31.0
FAN28G2384 Fragaria x ananassa HOM05D004113 ORTHO05D005233 3.5e-13 79.3 139 31.7
Lj1g0003494 Lotus japonicus HOM05D004113 ORTHO05D005233 3.5e-13 79.3 139 31.7
MD15G1314600 Malus domestica HOM05D004113 ORTHO05D005233 3.5e-13 79.3 140 32.9
Lalb_Chr08g0238441 Lupinus albus HOM05D004113 ORTHO05D005233 4.6e-13 79.0 139 31.7
Glyma.06G152400 Glycine max HOM05D004113 ORTHO05D005233 6.0e-13 78.6 139 32.4
Lsat_1_v5_gn_8_17501 Lactuca sativa HOM05D004113 ORTHO05D005233 6.0e-13 78.6 142 30.3
CiPaw.03G129200 Carya illinoinensis HOM05D004113 ORTHO05D005233 7.8e-13 78.2 142 31.0
EL10Ac1g01806 Beta vulgaris HOM05D004113 ORTHO05D005233 1.0e-12 77.8 147 29.9
Cpa.g.sc42.138 Carica papaya HOM05D004113 ORTHO05D005233 1.3e-12 77.4 142 29.6
Cfa002816 Carpinus fangiana HOM05D004113 ORTHO05D005233 1.3e-12 77.4 143 32.2
Oeu004248.1 Olea europaea HOM05D004113 ORTHO05D005233 1.3e-12 77.4 146 30.1
AL8G42030 Arabidopsis lyrata HOM05D004113 ORTHO05D005233 1.7e-12 77.0 139 30.2
Haze_25111 Corylus avellana HOM05D004113 ORTHO05D005233 1.7e-12 77.0 143 31.5
Gorai.011G116700 Gossypium raimondii HOM05D004113 ORTHO05D005233 1.7e-12 77.0 138 29.0
BcaB04g19979 Brassica carinata HOM05D004113 ORTHO05D005233 2.3e-12 76.6 139 30.2
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 3.0e-12 76.3 133 31.6
Ciclev10002604m.g Citrus clementina HOM05D004113 ORTHO05D005233 3.0e-12 76.3 147 30.6
PSO017G4136 Papaver somniferum HOM05D004113 ORTHO05D304858 3.0e-12 76.3 87 41.4
Sc01g0006950 Simmondsia chinensis HOM05D004113 ORTHO05D005233 3.0e-12 76.3 134 33.6
Thecc.01G128300 Theobroma cacao HOM05D004113 ORTHO05D005233 3.0e-12 76.3 139 28.8
TWI75G0632 Tripterygium wilfordii HOM05D004113 ORTHO05D005233 3.0e-12 76.3 143 29.4
MSTRG.23446 Avicennia marina HOM05D004113 ORTHO05D005233 3.9e-12 75.9 139 30.9
QL06p029175 Quercus lobata HOM05D004113 ORTHO05D005233 5.1e-12 75.5 142 30.3
Medtr3g095980 Medicago truncatula HOM05D004113 ORTHO05D005233 6.6e-12 75.1 139 29.5
CARHR278590 Cardamine hirsuta HOM05D004113 ORTHO05D005233 8.7e-12 74.7 139 30.2
AT5G64620 Arabidopsis thaliana HOM05D004113 ORTHO05D005233 1.1e-11 74.3 139 30.2
CsaV3_6G041710 Cucumis sativus L. HOM05D004113 ORTHO05D005233 1.1e-11 74.3 141 31.9
Gohir.D10G106500 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.1e-11 74.3 134 29.1
TPR.G34657 Trifolium pratense HOM05D004113 ORTHO05D005233 1.1e-11 74.3 139 29.5
Gohir.A10G084907 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.5e-11 73.9 139 28.1
HanXRQChr08g0218241 Helianthus annuus HOM05D004113 ORTHO05D005233 1.9e-11 73.6 143 29.4
Psat0s10365g0080 Pisum sativum HOM05D004113 ORTHO05D005233 1.9e-11 73.6 139 28.1
Psat5g060000 Pisum sativum HOM05D004113 ORTHO05D005233 1.9e-11 73.6 139 28.1
THA.LOC104799518 Tarenaya hassleriana HOM05D004113 ORTHO05D005233 1.9e-11 73.6 139 30.2
Atru.chr4.844 Acer truncatum HOM05D004113 ORTHO05D005233 3.3e-11 72.8 144 29.9
A09p08750 Brassica napus HOM05D004113 ORTHO05D005233 3.3e-11 72.8 139 30.2
BraA09t36524Z Brassica rapa HOM05D004113 ORTHO05D005233 3.3e-11 72.8 139 30.2
DCAR_001364 Daucus carota HOM05D004113 ORTHO05D005233 3.3e-11 72.8 146 29.5
THA.LOC104819318 Tarenaya hassleriana HOM05D004113 ORTHO05D005233 4.3e-11 72.4 139 30.2
Sp2g27680 Schrenkiella parvula HOM05D004113 ORTHO05D005233 5.6e-11 72.0 134 29.1
BcaC01g02693 Brassica carinata HOM05D004113 ORTHO05D005233 7.3e-11 71.6 135 31.9
C03p61570 Brassica napus HOM05D004113 ORTHO05D005233 7.3e-11 71.6 135 31.9
Gorai.003G067200 Gossypium raimondii HOM05D004113 ORTHO05D005233 7.3e-11 71.6 139 28.1
PSO782G3380 Papaver somniferum HOM05D004113 ORTHO05D005233 7.3e-11 71.6 139 29.5
BcaB02g09804 Brassica carinata HOM05D004113 ORTHO05D005233 9.6e-11 71.2 135 31.9
BolC3t18417H Brassica oleracea HOM05D004113 ORTHO05D005233 9.6e-11 71.2 135 31.9
Thhalv10005004m.g Eutrema salsugineum HOM05D004113 ORTHO05D005233 9.6e-11 71.2 134 28.4
BraA06t26077Z Brassica rapa HOM05D004113 ORTHO05D005233 1.3e-10 70.9 135 31.9
Gohir.A11G230200 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.3e-10 70.9 139 28.1
HanXRQChr12g0368871 Helianthus annuus HOM05D004113 ORTHO05D005233 1.6e-10 70.5 141 29.1
Aqoxy5G02176 Aquilegia oxysepala HOM05D004113 ORTHO05D005233 2.1e-10 70.1 141 33.3
arahy.Tifrunner.gnm1.ann1.FMR9EU Arachis hypogaea HOM05D004113 ORTHO05D005233 2.1e-10 70.1 140 30.7
arahy.Tifrunner.gnm1.ann1.PRK495 Arachis hypogaea HOM05D004113 ORTHO05D005233 2.1e-10 70.1 140 30.7
Sed0011375 Sechium edule HOM05D004113 ORTHO05D005233 2.1e-10 70.1 141 28.4
MELO3C008049.2 Cucumis melo HOM05D004113 ORTHO05D005233 2.8e-10 69.7 142 29.6
Hma1.2p1_0528F.1_g173060 Hydrangea macrophylla HOM05D004113 ORTHO05D005233 2.8e-10 69.7 144 27.8
PSO063G6208 Papaver somniferum HOM05D004113 ORTHO05D005233 2.8e-10 69.7 139 28.1
Gohir.D11G230300 Gossypium hirsutum HOM05D004113 ORTHO05D005233 3.6e-10 69.3 139 28.1
Aa31LG1G17330 Aethionema arabicum HOM05D004113 ORTHO05D005233 6.2e-10 68.6 143 29.4
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 6.2e-10 68.6 137 29.2
C09p09900 Brassica napus HOM05D004113 ORTHO05D005233 8.1e-10 68.2 139 29.5
BolC9t53899H Brassica oleracea HOM05D004113 ORTHO05D005233 8.1e-10 68.2 139 29.5
BcaC04g23305 Brassica carinata HOM05D004113 ORTHO05D005233 1.1e-09 67.8 139 29.5
CARHR287460 Cardamine hirsuta HOM05D004113 ORTHO05D005233 1.1e-09 67.8 139 27.3
ClCG01G015470 Citrullus lanatus HOM05D004113 ORTHO05D005233 1.4e-09 67.4 135 28.9
Peaxi162Scf00589g00001 Petunia axillaris HOM05D004113 ORTHO05D005233 1.4e-09 67.4 150 29.3
VMungo0251G1253 Vigna mungo HOM05D004113 ORTHO05D005233 1.4e-09 67.4 136 30.9
Oeu047690.1 Olea europaea HOM05D004113 ORTHO05D005233 1.8e-09 67.0 142 25.4
PGR119G1148 Punica granatum HOM05D003556 ORTHO05D003404 2.4e-09 66.6 164 30.5
CAN.G1163.3 Capsicum annuum HOM05D004113 ORTHO05D005233 3.1e-09 66.2 149 28.9
Solyc11g005820.1 Solanum lycopersicum HOM05D004113 ORTHO05D005233 4.0e-09 65.9 150 30.0
Sopen11g001780 Solanum pennellii HOM05D004113 ORTHO05D005233 6.9e-09 65.1 150 28.7
PGSC0003DMG400028678 Solanum tuberosum HOM05D004113 ORTHO05D005233 9.0e-09 64.7 149 30.2
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.2e-08 64.3 141 31.2
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 1.5e-08 63.9 127 29.9
Aqoxy7G03403 Aquilegia oxysepala HOM05D059304 ORTHO05D005233 1.7e-07 60.5 175 28.6
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 2.2e-07 60.1 138 27.5
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 2.2e-07 60.1 138 27.5
CiPaw.04G086900 Carya illinoinensis HOM05D004113 ORTHO05D005233 2.2e-07 60.1 142 28.2
CDE08G0148 Ceratophyllum demersum HOM05D004113 ORTHO05D005233 3.8e-07 59.3 137 27.7
HanXRQChr07g0188521 Helianthus annuus HOM05D001445 ORTHO05D001261 3.8e-07 59.3 137 26.3
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 4.9e-07 58.9 143 28.0
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 4.9e-07 58.9 141 32.6
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 6.4e-07 58.5 149 27.5
Atru.chr6.1289 Acer truncatum HOM05D004113 ORTHO05D001207 8.4e-07 58.2 141 29.1
Ciclev10006032m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.1e-06 57.8 144 29.9
MD13G1149800 Malus domestica HOM05D001578 ORTHO05D001207 1.1e-06 57.8 140 30.7
Os08g0108100 Oryza sativa ssp. japonica HOM05D004113 ORTHO05D005233 1.1e-06 57.8 149 28.2
BcaC01g02692 Brassica carinata HOM05D004113 ORTHO05D005233 1.4e-06 57.4 114 31.6
C03p61580 Brassica napus HOM05D004113 ORTHO05D005233 1.4e-06 57.4 114 31.6
HanXRQChr16g0522931 Helianthus annuus HOM05D001445 ORTHO05D001261 1.4e-06 57.4 137 26.3
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 1.9e-06 57.0 135 28.9
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 2.4e-06 56.6 142 31.7
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 2.4e-06 56.6 176 26.7
Sed0024266 Sechium edule HOM05D004113 ORTHO05D005233 2.4e-06 56.6 145 24.8
MD16G1150200 Malus domestica HOM05D001578 ORTHO05D001207 3.2e-06 56.2 139 29.5
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 3.2e-06 56.2 149 30.2
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 4.2e-06 55.8 139 31.7
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 4.2e-06 55.8 145 24.1
BcaC09g48672 Brassica carinata HOM05D009524 ORTHO05D001207 5.4e-06 55.5 142 28.2
C01p47080 Brassica napus HOM05D009524 ORTHO05D001207 5.4e-06 55.5 142 28.2
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 5.4e-06 55.5 134 29.1
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 5.4e-06 55.5 141 29.8
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 5.4e-06 55.5 137 26.3
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 5.4e-06 55.5 127 33.1
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 7.1e-06 55.1 141 27.0
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 7.1e-06 55.1 137 26.3
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 9.3e-06 54.7 136 30.9


User provided reference genes

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