Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.2e-294 1015.8 512 100.0
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 7.1e-263 910.2 512 88.7
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.4e-197 693.3 516 67.2
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 8.2e-195 684.1 514 66.0
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 3.0e-189 665.6 526 64.6
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 5.2e-189 664.8 512 65.8
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 8.8e-189 664.1 511 65.4
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 8.8e-189 664.1 515 64.3
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 1.5e-188 663.3 513 65.1
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 2.6e-188 662.5 512 63.7
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 9.8e-188 660.6 512 64.8
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.2e-185 653.7 512 63.1
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 5.9e-185 651.4 512 62.7
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.0e-184 648.3 513 63.2
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.5e-183 646.7 512 62.5
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.5e-183 646.7 512 63.7
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 7.2e-183 644.4 512 62.3
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 1.8e-181 639.8 513 61.6
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 8.8e-181 637.5 550 59.6
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.0e-180 636.3 512 61.5
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 3.4e-180 635.6 512 61.1
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 5.7e-180 634.8 553 58.6
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 1.3e-179 633.6 512 61.5
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 3.7e-179 632.1 525 61.1
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 3.7e-179 632.1 512 61.3
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 4.9e-179 631.7 513 61.2
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 4.9e-179 631.7 512 62.1
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 8.3e-179 630.9 530 60.9
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.1e-178 630.6 516 62.8
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 2.0e-177 626.3 514 61.7
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 2.0e-177 626.3 513 60.4
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.0e-176 624.0 513 60.6
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 3.8e-176 622.1 516 58.9
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 5.0e-176 621.7 512 60.7
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.1e-175 620.5 512 60.5
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.9e-175 619.8 516 60.7
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 3.3e-175 619.0 512 59.2
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 7.3e-175 617.8 516 59.5
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 1.0e-173 614.0 513 58.5
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 1.4e-173 613.6 513 58.9
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.8e-173 613.2 513 59.3
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.5e-172 610.1 512 59.6
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 2.6e-172 609.4 517 60.3
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 3.4e-172 609.0 514 60.1
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 4.4e-172 608.6 512 58.8
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 7.5e-172 607.8 513 59.6
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 2.9e-171 605.9 518 60.2
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 8.3e-171 604.4 513 59.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.1e-170 604.0 519 61.1
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 2.4e-170 602.8 513 58.3
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.4e-170 602.8 543 57.6
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 2.4e-170 602.8 512 59.4
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 3.2e-170 602.4 516 59.9
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 4.1e-170 602.1 513 60.0
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 7.0e-170 601.3 513 57.7
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 1.6e-169 600.1 518 60.4
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.6e-169 600.1 512 57.6
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 2.0e-169 599.7 516 60.1
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 5.9e-169 598.2 516 60.1
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 7.8e-169 597.8 518 58.9
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 7.8e-169 597.8 512 57.4
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.0e-168 597.4 515 59.0
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 6.6e-168 594.7 512 59.0
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 8.6e-168 594.3 514 59.9
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 1.9e-167 593.2 523 59.1
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 5.6e-167 591.7 513 57.7
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 9.5e-167 590.9 498 60.4
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.6e-166 590.1 522 59.0
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.4e-165 587.0 484 61.2
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 1.4e-165 587.0 514 57.8
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 2.3e-165 586.3 512 55.9
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 5.2e-165 585.1 518 56.9
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 8.9e-165 584.3 513 59.6
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 8.9e-165 584.3 513 59.6
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 8.9e-165 584.3 513 56.5
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 3.4e-164 582.4 512 59.2
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 3.7e-163 578.9 521 58.3
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 8.3e-163 577.8 516 58.3
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 2.7e-161 572.8 555 54.1
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.1e-158 563.1 461 62.0
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 3.6e-158 562.4 512 55.1
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 6.2e-158 561.6 586 51.9
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 6.2e-158 561.6 508 55.7
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 1.8e-157 560.1 500 56.6
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.2e-157 558.5 592 51.0
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 1.7e-155 553.5 462 61.5
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 2.2e-155 553.1 439 63.3
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 6.4e-155 551.6 514 57.0
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 3.2e-154 549.3 485 59.6
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 4.1e-154 548.9 427 64.6
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 2.2e-147 526.6 453 58.1
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 7.8e-145 518.1 533 51.6
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.5e-143 513.1 517 51.6
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 1.4e-141 507.3 534 52.8
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 4.9e-131 472.2 462 54.5
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.8e-128 463.8 469 50.1
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 7.6e-124 448.4 525 47.6
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 7.9e-121 438.3 393 58.5
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.0e-120 438.0 377 58.6
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 1.5e-111 407.5 341 60.7
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 1.5e-111 407.5 528 43.6
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 6.7e-104 382.1 527 43.6
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.3e-101 372.5 380 53.2
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 4.4e-95 352.8 388 50.5
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 1.4e-90 337.8 326 54.6
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 5.5e-90 335.9 463 43.8
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 5.7e-87 325.9 455 42.4
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.5e-82 311.2 343 50.1
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.0e-76 290.8 258 56.6
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 7.7e-76 288.9 321 52.0
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 5.5e-74 282.7 196 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.6e-73 281.2 460 39.8
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.2e-68 265.0 430 39.8
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 1.4e-64 251.5 374 43.6
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.0e-56 225.3 363 38.6
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 9.8e-55 218.8 546 31.1
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.1e-53 215.3 171 64.3
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 1.4e-48 198.4 135 70.4
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.0e-43 179.9 131 66.4
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.0e-43 179.9 131 66.4
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.1e-36 157.9 136 58.1
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 7.6e-31 139.4 518 27.8
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.1e-29 135.6 192 40.6
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 8.4e-22 109.4 60 81.7
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.1e-18 99.0 57 75.4
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 9.6e-18 95.9 53 77.4
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 6.2e-17 93.2 224 32.6
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 8.1e-17 92.8 62 67.7
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 8.1e-17 92.8 62 67.7
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 2.4e-16 91.3 61 62.3
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.0e-15 88.2 116 42.2
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 2.9e-14 84.3 65 60.0
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 9.3e-13 79.3 65 58.5
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 2.8e-09 67.8 74 48.6


User provided reference genes

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