Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 4.0e-63 244.6 124 100.0
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 2.0e-62 242.3 124 99.2
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 3.2e-36 155.2 125 64.0
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 6.7e-34 147.5 131 58.0
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.5e-33 146.4 128 60.9
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 5.7e-33 144.4 128 60.2
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.7e-32 142.9 118 58.5
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.2e-32 142.5 128 59.4
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 3.7e-32 141.7 130 57.7
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 4.8e-32 141.4 128 58.6
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 1.1e-31 140.2 131 59.5
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 9.1e-31 137.1 132 55.3
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 9.1e-31 137.1 135 55.6
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 1.6e-30 136.3 130 56.9
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 2.0e-30 136.0 90 71.1
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 2.0e-30 136.0 126 55.6
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 2.6e-30 135.6 132 55.3
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 4.5e-30 134.8 90 72.2
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 5.9e-30 134.4 117 59.0
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 5.9e-30 134.4 95 66.3
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 1.0e-29 133.7 133 54.1
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 1.3e-29 133.3 131 55.0
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.7e-29 132.9 127 59.1
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 2.9e-29 132.1 85 71.8
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 3.8e-29 131.7 129 52.7
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 3.8e-29 131.7 130 56.9
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 5.0e-29 131.3 130 54.6
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 6.5e-29 131.0 110 58.2
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 6.5e-29 131.0 126 53.2
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 6.5e-29 131.0 126 57.9
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 8.5e-29 130.6 97 64.9
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 8.5e-29 130.6 124 55.6
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 1.9e-28 129.4 127 55.1
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 1.9e-28 129.4 127 55.1
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 2.5e-28 129.0 131 54.2
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 2.5e-28 129.0 131 54.2
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 2.5e-28 129.0 113 58.4
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 2.5e-28 129.0 88 69.3
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 3.2e-28 128.6 122 56.6
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 4.2e-28 128.3 128 56.2
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 5.5e-28 127.9 93 62.4
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 5.5e-28 127.9 134 53.7
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 7.2e-28 127.5 102 60.8
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 9.4e-28 127.1 88 68.2
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 1.2e-27 126.7 134 50.7
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 1.2e-27 126.7 119 53.8
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 1.2e-27 126.7 89 68.5
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 1.6e-27 126.3 133 48.9
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 2.1e-27 125.9 125 54.4
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 2.1e-27 125.9 96 61.5
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 2.1e-27 125.9 110 59.1
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 2.7e-27 125.6 85 67.1
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 3.6e-27 125.2 85 64.7
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 3.6e-27 125.2 85 64.7
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 3.6e-27 125.2 97 60.8
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 4.7e-27 124.8 85 67.1
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 4.7e-27 124.8 85 64.7
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 4.7e-27 124.8 132 53.0
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 6.1e-27 124.4 86 67.4
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 6.1e-27 124.4 86 67.4
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 6.1e-27 124.4 85 64.7
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 8.0e-27 124.0 96 63.5
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 8.0e-27 124.0 85 67.1
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 8.0e-27 124.0 123 49.6
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 8.0e-27 124.0 85 67.1
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 1.0e-26 123.6 87 66.7
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 1.0e-26 123.6 113 55.8
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 1.4e-26 123.2 85 63.5
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 1.4e-26 123.2 80 72.5
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 2.3e-26 122.5 86 66.3
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 2.3e-26 122.5 75 74.7
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 2.3e-26 122.5 121 52.9
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 3.0e-26 122.1 85 65.9
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 4.0e-26 121.7 127 52.0
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 4.0e-26 121.7 86 66.3
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 4.0e-26 121.7 87 65.5
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 5.2e-26 121.3 126 53.2
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 8.8e-26 120.6 134 47.0
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 8.8e-26 120.6 72 73.6
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 1.1e-25 120.2 81 66.7
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 1.5e-25 119.8 86 65.1
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 2.6e-25 119.0 129 51.2
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 5.7e-25 117.9 83 66.3
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 9.7e-25 117.1 113 54.9
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.3e-24 116.7 110 52.7
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 2.8e-24 115.5 159 47.2
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 2.8e-24 115.5 129 48.8
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 4.8e-24 114.8 86 62.8
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 8.2e-24 114.0 127 47.2
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 1.4e-23 113.2 142 45.1
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 1.4e-23 113.2 74 64.9
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 4.1e-23 111.7 76 69.7
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 4.1e-23 111.7 77 64.9
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 5.9e-22 107.8 96 54.2
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 8.5e-21 104.0 112 44.6
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 1.1e-20 103.6 121 52.1
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.5e-20 103.2 55 80.0
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 4.0e-18 95.1 66 68.2
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 1.2e-17 93.6 80 47.5
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 5.7e-17 91.3 109 47.7
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 3.7e-16 88.6 92 52.2
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 4.8e-16 88.2 94 46.8
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 4.8e-16 88.2 120 37.5
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 8.3e-16 87.4 64 57.8
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 1.4e-15 86.7 75 46.7
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 1.6e-11 73.2 39 82.1
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 4.7e-11 71.6 98 44.9
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 8.8e-10 67.4 97 44.3
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 2.8e-08 62.4 37 70.3
PSO063G5440 Papaver somniferum HOM05D001205 ORTHO05D001087 4.1e-07 58.5 53 69.8
PSO832G4406 Papaver somniferum HOM05D001205 ORTHO05D001087 9.2e-07 57.4 53 69.8


User provided reference genes

Program Settings