Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2603 Papaver somniferum HOM05D003018 ORTHO05D003402 3.7e-82 308.1 154 100.0
PSO384G5006 Papaver somniferum HOM05D003018 ORTHO05D003402 4.7e-37 158.3 152 61.2
PSO339G1467 Papaver somniferum HOM05D003018 ORTHO05D003402 1.3e-18 97.1 143 44.8
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 5.1e-15 85.1 136 39.0
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 8.7e-15 84.3 136 39.7
PSO339G6351 Papaver somniferum HOM05D003018 ORTHO05D003402 1.1e-14 84.0 119 42.9
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 8.1e-13 77.8 160 35.0
PSO339G5543 Papaver somniferum HOM05D003018 ORTHO05D003402 1.4e-12 77.0 127 40.9
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 2.4e-12 76.3 161 34.2
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 4.0e-12 75.5 161 34.2
PSO339G5858 Papaver somniferum HOM05D003018 ORTHO05D003402 4.0e-12 75.5 120 43.3
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 6.9e-12 74.7 161 32.9
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 6.9e-12 74.7 161 32.9
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 6.9e-12 74.7 161 33.5
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 3.4e-11 72.4 160 32.5
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 3.4e-11 72.4 160 32.5
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 5.8e-11 71.6 154 33.8
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 1.3e-10 70.5 161 32.9
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.7e-10 70.1 155 32.3
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 2.2e-10 69.7 156 32.1
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 2.2e-10 69.7 161 31.1
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 2.9e-10 69.3 156 31.4
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 2.9e-10 69.3 154 32.5
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 3.8e-10 68.9 155 32.3
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 3.8e-10 68.9 156 32.7
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 4.9e-10 68.6 155 34.2
Gohir.A09G187100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 6.4e-10 68.2 153 32.0
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 6.4e-10 68.2 156 33.3
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 8.4e-10 67.8 155 32.9
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 8.4e-10 67.8 155 32.9
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 8.4e-10 67.8 154 33.1
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.1e-09 67.4 155 32.9
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 1.1e-09 67.4 153 32.7
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 1.1e-09 67.4 153 32.7
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 1.1e-09 67.4 155 32.3
ECA248G2250 Erigeron canadensis HOM05D003018 ORTHO05D003402 1.9e-09 66.6 150 36.7
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 1.9e-09 66.6 156 32.1
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 1.9e-09 66.6 156 32.1
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 2.4e-09 66.2 158 34.2
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 2.4e-09 66.2 155 32.3
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 2.4e-09 66.2 156 31.4
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 2.4e-09 66.2 155 31.6
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 2.4e-09 66.2 155 31.6
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 2.4e-09 66.2 154 32.5
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 2.4e-09 66.2 157 35.7
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 2.4e-09 66.2 156 30.8
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 3.2e-09 65.9 161 30.4
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 4.2e-09 65.5 158 33.5
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 5.5e-09 65.1 157 31.8
Lsat_1_v5_gn_2_135421 Lactuca sativa HOM05D003018 ORTHO05D003402 5.5e-09 65.1 167 30.5
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 5.5e-09 65.1 156 31.4
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 7.1e-09 64.7 160 29.4
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 7.1e-09 64.7 158 34.8
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 7.1e-09 64.7 155 31.6
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 7.1e-09 64.7 91 41.8
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 7.1e-09 64.7 153 32.0
Lsat_1_v5_gn_8_4220 Lactuca sativa HOM05D003018 ORTHO05D003402 9.3e-09 64.3 144 33.3
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 9.3e-09 64.3 155 31.0
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 1.2e-08 63.9 155 34.2
Psat5g071120 Pisum sativum HOM05D003018 ORTHO05D003402 1.6e-08 63.5 93 37.6
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 2.1e-08 63.2 157 33.8
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.7e-08 62.8 155 31.0
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 2.7e-08 62.8 153 30.1
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 2.7e-08 62.8 159 30.8
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 2.7e-08 62.8 153 29.4
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 3.5e-08 62.4 155 32.9
PSO339G5652 Papaver somniferum HOM05D003018 ORTHO05D003402 3.5e-08 62.4 150 32.0
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 3.5e-08 62.4 156 30.1
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 4.6e-08 62.0 157 32.5
CDE02G1646 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 4.6e-08 62.0 153 32.0
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 7.9e-08 61.2 157 32.5
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 7.9e-08 61.2 155 30.3
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 7.9e-08 61.2 155 31.0
TPR.G35918 Trifolium pratense HOM05D003018 ORTHO05D003402 7.9e-08 61.2 154 31.2
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 7.9e-08 61.2 154 31.8
Cc02_g00590 Coffea canephora HOM05D003018 ORTHO05D003402 1.0e-07 60.8 91 40.7
Sc19g0000360 Simmondsia chinensis HOM05D003018 ORTHO05D003402 1.0e-07 60.8 98 38.8
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 2.3e-07 59.7 98 36.7
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 2.3e-07 59.7 98 36.7
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 3.0e-07 59.3 138 34.1
ECA248G1111 Erigeron canadensis HOM05D001208 ORTHO05D001593 3.0e-07 59.3 158 31.0
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 3.0e-07 59.3 98 35.7
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 3.9e-07 58.9 91 40.7
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 3.9e-07 58.9 154 32.5
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 3.9e-07 58.9 163 30.1
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 5.1e-07 58.5 142 31.0
ECA248G0015 Erigeron canadensis HOM05D003018 ORTHO05D003402 5.1e-07 58.5 120 37.5
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 5.1e-07 58.5 93 37.6
GSVIVG01038683001 Vitis vinifera HOM05D003018 ORTHO05D003402 5.1e-07 58.5 91 39.6
DCAR_010557 Daucus carota HOM05D003018 ORTHO05D003402 8.7e-07 57.8 94 41.5
COL.COLO4_14400 Corchorus olitorius HOM05D003018 ORTHO05D003402 2.5e-06 56.2 176 27.8
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 2.5e-06 56.2 153 30.1
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 4.3e-06 55.5 93 36.6
AagrBONN_evm.TU.Sc2ySwM_344.126 Anthoceros agrestis HOM05D003018 ORTHO05D003402 5.6e-06 55.1 142 28.9
Gorai.007G017700 Gossypium raimondii HOM05D003018 ORTHO05D003402 9.6e-06 54.3 80 41.2
Mapoly0083s0018 Marchantia polymorpha HOM05D003018 ORTHO05D003402 9.6e-06 54.3 91 36.3


User provided reference genes

Program Settings