Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 6.0e-170 600.9 334 100.0
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.4e-157 558.5 326 92.9
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 1.8e-150 536.2 293 94.2
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 1.9e-70 270.4 282 57.4
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-64 250.8 282 56.0
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 4.0e-57 226.1 264 52.3
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-54 218.0 282 51.4
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-48 197.2 301 47.8
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-47 193.7 233 55.4
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 3.3e-43 179.9 308 42.9
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 3.3e-43 179.9 202 52.5
PSO447G0093 Papaver somniferum HOM05D004787 ORTHO05D304571 3.6e-42 176.4 122 79.5
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-41 174.1 212 55.7
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-40 171.4 286 45.5
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-40 171.4 243 50.2
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 4.5e-40 169.5 226 50.9
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 1.0e-36 158.3 200 51.0
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 2.5e-35 153.7 200 50.0
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 5.3e-33 146.0 203 51.2
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 6.9e-33 145.6 289 40.1
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-32 144.4 165 55.8
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 2.6e-32 143.7 289 39.8
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 3.4e-32 143.3 126 62.7
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 4.5e-32 142.9 289 39.4
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 4.5e-32 142.9 289 39.8
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 7.6e-32 142.1 275 40.0
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 1.3e-31 141.4 277 38.6
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-31 141.4 165 54.5
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 2.2e-31 140.6 128 60.2
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 2.9e-31 140.2 277 40.1
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 3.8e-31 139.8 277 40.1
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 3.8e-31 139.8 277 39.0
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 4.9e-31 139.4 277 40.8
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.1e-30 138.3 289 38.8
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 1.1e-30 138.3 276 38.0
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 1.4e-30 137.9 277 39.0
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 1.4e-30 137.9 277 39.7
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.9e-30 137.5 289 38.4
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 1.9e-30 137.5 289 38.8
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 3.2e-30 136.7 277 39.4
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 4.2e-30 136.3 288 38.5
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 4.2e-30 136.3 289 38.1
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 5.5e-30 136.0 277 39.0
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.6e-29 134.4 275 40.0
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 1.6e-29 134.4 277 39.4
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 2.1e-29 134.0 277 39.0
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 2.1e-29 134.0 289 38.4
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 2.1e-29 134.0 277 38.6
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 2.7e-29 133.7 310 36.8
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 2.7e-29 133.7 275 40.0
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 4.6e-29 132.9 308 37.0
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 6.0e-29 132.5 277 39.0
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 7.9e-29 132.1 277 38.3
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 1.0e-28 131.7 277 38.3
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.3e-28 131.3 277 38.6
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 1.3e-28 131.3 184 48.9
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 1.3e-28 131.3 277 38.3
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 2.3e-28 130.6 276 37.3
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.0e-28 130.2 289 37.7
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 3.0e-28 130.2 289 37.7
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 3.0e-28 130.2 276 37.3
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 3.9e-28 129.8 277 38.3
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 3.9e-28 129.8 284 37.7
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 5.1e-28 129.4 277 37.9
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 5.1e-28 129.4 276 37.3
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 6.7e-28 129.0 284 37.7
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.1e-27 128.3 277 37.2
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.1e-27 128.3 288 37.5
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 1.1e-27 128.3 289 37.4
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 1.5e-27 127.9 314 36.3
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 1.5e-27 127.9 276 37.7
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.5e-27 127.9 298 35.6
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 2.5e-27 127.1 277 37.9
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 2.5e-27 127.1 277 37.2
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 2.5e-27 127.1 286 36.7
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 3.3e-27 126.7 277 36.8
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 3.3e-27 126.7 286 37.4
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 3.3e-27 126.7 273 36.6
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 4.3e-27 126.3 286 36.7
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 5.6e-27 125.9 273 37.4
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 9.6e-27 125.2 287 36.9
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 2.1e-26 124.0 287 36.9
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.8e-26 123.6 238 41.2
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.8e-26 123.6 238 40.8
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.7e-26 123.2 298 36.6
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 3.7e-26 123.2 298 35.9
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 3.7e-26 123.2 276 37.3
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 6.2e-26 122.5 277 36.5
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 8.1e-26 122.1 286 36.0
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 8.1e-26 122.1 287 36.6
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 2.4e-25 120.6 273 36.6
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 6.9e-25 119.0 284 36.6
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 9.0e-25 118.6 284 35.9
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 1.2e-24 118.2 288 35.4
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.6e-24 117.1 284 35.9
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 4.5e-24 116.3 296 34.5
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 5.8e-24 115.9 285 35.8
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 5.8e-24 115.9 298 34.6
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 7.6e-24 115.5 283 31.4
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.3e-23 114.8 309 34.3
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.8e-23 113.2 302 34.1
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 4.9e-23 112.8 272 35.3
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 4.9e-23 112.8 285 35.4
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 6.5e-23 112.5 273 35.9
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 8.4e-23 112.1 276 36.6
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.9e-22 110.9 266 36.1
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 2.5e-22 110.5 283 35.0
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 5.5e-22 109.4 238 39.1
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 7.1e-22 109.0 275 33.5
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 9.3e-22 108.6 269 34.9
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 2.1e-21 107.5 285 33.7
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 3.5e-21 106.7 272 33.8
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 3.5e-21 106.7 272 33.8
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 4.6e-21 106.3 313 33.2
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 7.9e-21 105.5 273 33.7
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.0e-20 105.1 277 32.1
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.0e-20 105.1 277 32.1
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 2.5e-19 100.5 262 32.8
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 4.3e-19 99.8 220 36.8
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.3e-18 98.2 155 46.5
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 3.7e-18 96.7 240 32.9
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 4.8e-18 96.3 216 37.0
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 4.8e-18 96.3 155 46.5
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 6.3e-18 95.9 177 41.2
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 1.2e-16 91.7 392 28.6
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 2.6e-16 90.5 287 30.3
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 3.4e-16 90.1 303 30.0
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 3.4e-16 90.1 205 36.1
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 4.5e-16 89.7 296 30.7
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.3e-15 88.2 364 28.8
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 6.7e-12 75.9 139 41.0
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.1e-11 75.1 159 37.1
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 1.9e-11 74.3 157 38.9
PSO339G2254 Papaver somniferum HOM05D004787 ORTHO05D305067 1.4e-09 68.2 43 83.7
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.8e-09 67.8 216 30.1
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 5.9e-08 62.8 126 37.3
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 7.7e-08 62.4 130 37.7
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 3.8e-07 60.1 121 38.8
PSO170G1852 Papaver somniferum HOM05D004787 ORTHO05D302361 3.8e-07 60.1 82 46.3
PSO210G5779 Papaver somniferum HOM05D004787 ORTHO05D303704 3.8e-07 60.1 82 46.3


User provided reference genes

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