Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 9.5e-84 313.5 166 100.0
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 5.8e-81 304.3 166 98.2
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 7.1e-39 164.5 164 60.4
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 9.3e-39 164.1 160 64.4
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 1.0e-37 160.6 169 60.4
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 1.3e-37 160.2 162 58.0
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 3.3e-36 155.6 163 57.7
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 5.6e-36 154.8 165 56.4
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 6.2e-35 151.4 160 58.8
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 9.0e-34 147.5 160 56.2
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 1.9e-31 139.8 162 53.7
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 2.5e-31 139.4 163 55.8
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 5.5e-31 138.3 162 53.7
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 7.1e-31 137.9 166 53.6
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 9.3e-31 137.5 169 54.4
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 9.3e-31 137.5 162 53.1
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 2.7e-30 136.0 165 52.1
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 1.3e-29 133.7 151 58.3
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 2.3e-29 132.9 173 50.9
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 2.3e-29 132.9 173 53.2
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 2.3e-29 132.9 103 70.9
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 3.0e-29 132.5 113 67.3
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 3.0e-29 132.5 163 52.1
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 5.1e-29 131.7 161 51.6
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 6.7e-29 131.3 184 49.5
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 1.1e-28 130.6 111 66.7
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 1.5e-28 130.2 166 53.6
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 1.9e-28 129.8 117 60.7
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 2.5e-28 129.4 170 51.2
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 2.5e-28 129.4 114 64.0
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 3.3e-28 129.0 170 50.0
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 4.3e-28 128.6 180 48.3
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 7.4e-28 127.9 166 53.0
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 9.6e-28 127.5 168 50.0
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 2.1e-27 126.3 117 59.8
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 6.2e-27 124.8 116 63.8
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 1.1e-26 124.0 172 49.4
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 1.4e-26 123.6 167 48.5
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 3.1e-26 122.5 157 49.7
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 3.1e-26 122.5 169 50.3
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 4.0e-26 122.1 172 49.4
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 5.3e-26 121.7 122 59.8
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 5.3e-26 121.7 160 50.0
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 5.3e-26 121.7 167 49.1
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 5.3e-26 121.7 164 48.2
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 6.9e-26 121.3 168 48.2
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 6.9e-26 121.3 167 50.3
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 1.2e-25 120.6 166 48.8
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 1.2e-25 120.6 166 46.4
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 1.2e-25 120.6 166 48.8
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.5e-25 120.2 162 48.1
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 2.0e-25 119.8 164 49.4
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 2.6e-25 119.4 180 46.1
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 3.4e-25 119.0 117 59.8
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 3.4e-25 119.0 180 47.2
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 4.5e-25 118.6 160 47.5
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 4.5e-25 118.6 172 49.4
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 5.8e-25 118.2 163 50.3
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 7.6e-25 117.9 170 51.2
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 1.3e-24 117.1 171 48.0
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 2.2e-24 116.3 165 50.3
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 3.8e-24 115.5 164 46.3
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 5.0e-24 115.2 150 50.7
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 8.4e-24 114.4 149 50.3
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 1.1e-23 114.0 163 48.5
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 1.1e-23 114.0 174 47.7
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 1.1e-23 114.0 95 67.4
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 1.4e-23 113.6 163 51.5
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 1.4e-23 113.6 167 49.1
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 1.9e-23 113.2 164 47.0
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 3.2e-23 112.5 165 48.5
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 4.2e-23 112.1 163 47.9
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 4.2e-23 112.1 168 48.8
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 5.5e-23 111.7 174 46.6
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 9.3e-23 110.9 156 50.0
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 4.6e-22 108.6 170 46.5
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 4.6e-22 108.6 174 47.1
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 4.6e-22 108.6 176 43.2
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 6.1e-22 108.2 146 52.1
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 1.3e-21 107.1 108 60.2
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 2.3e-21 106.3 163 47.2
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 5.1e-21 105.1 160 49.4
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 8.7e-21 104.4 146 50.0
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 1.1e-20 104.0 100 57.0
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 1.9e-20 103.2 157 48.4
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 2.5e-20 102.8 169 43.2
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 3.3e-20 102.4 102 55.9
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 4.3e-20 102.1 106 61.3
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 9.7e-20 100.9 81 66.7
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.3e-19 100.5 165 43.0
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 1.3e-19 100.5 160 46.2
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 2.2e-19 99.8 164 44.5
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 6.3e-19 98.2 164 43.9
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 1.8e-18 96.7 152 47.4
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 2.4e-18 96.3 164 43.9
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 2.4e-18 96.3 164 43.9
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 2.4e-18 96.3 156 45.5
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.2e-17 94.0 77 66.2
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 1.2e-17 94.0 84 60.7
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 1.5e-17 93.6 171 43.3
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 2.6e-17 92.8 96 60.4
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 7.7e-17 91.3 172 44.2
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 1.7e-16 90.1 135 45.9
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 1.2e-14 84.0 161 41.6
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 2.1e-14 83.2 116 50.0
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 2.7e-14 82.8 58 72.4
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 3.0e-13 79.3 72 63.9
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 1.5e-12 77.0 105 47.6
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 1.7e-11 73.6 95 54.7
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 6.3e-11 71.6 95 54.7
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 3.1e-10 69.3 165 35.2
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 1.7e-08 63.5 69 52.2
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 2.5e-07 59.7 69 55.1
TAR622G0888 Trochodendron aralioides HOM05D007065 ORTHO05D008960 2.5e-07 59.7 54 61.1
Pp3c19_1440 Physcomitrium patens HOM05D007065 ORTHO05D008960 6.1e-06 55.1 71 52.1


User provided reference genes

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