Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 2.0e-101 372.5 196 100.0
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 8.5e-100 367.1 196 99.0
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.2e-72 276.9 197 78.2
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 4.4e-72 275.0 197 77.7
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 9.8e-72 273.9 196 78.1
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 3.5e-69 265.4 195 76.4
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 7.8e-69 264.2 194 73.7
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 3.9e-68 261.9 198 76.3
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 5.0e-68 261.5 196 73.5
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.5e-67 260.0 196 77.6
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 3.3e-67 258.8 198 73.2
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 2.1e-66 256.1 198 72.2
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 6.2e-66 254.6 195 71.3
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 1.8e-65 253.1 197 72.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 2.3e-65 252.7 198 73.7
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 3.1e-65 252.3 198 71.2
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 6.8e-65 251.1 186 73.7
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 6.8e-65 251.1 199 71.9
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 8.9e-65 250.8 198 70.2
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.2e-64 250.4 198 72.2
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.5e-64 250.0 198 72.7
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.5e-64 250.0 198 70.2
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 9.9e-64 247.3 196 73.0
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 9.9e-64 247.3 197 69.0
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 1.7e-63 246.5 197 71.1
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.7e-63 245.4 200 70.5
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 4.9e-63 245.0 198 69.7
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.4e-62 243.4 197 73.1
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.4e-62 243.4 197 73.1
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.4e-62 243.4 197 73.1
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.2e-62 242.3 197 73.6
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.2e-62 242.3 197 73.6
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 4.1e-62 241.9 196 70.9
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 4.1e-62 241.9 199 69.8
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 7.1e-62 241.1 197 70.6
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 1.6e-61 240.0 197 71.1
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.6e-61 240.0 198 71.7
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 2.1e-61 239.6 196 67.3
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 2.7e-61 239.2 196 70.4
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 3.5e-61 238.8 197 68.5
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 4.6e-61 238.4 197 68.0
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 6.0e-61 238.0 201 70.6
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.3e-60 236.9 195 70.3
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.3e-60 236.9 198 71.2
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 1.3e-60 236.9 203 66.0
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 2.3e-60 236.1 143 86.7
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 2.3e-60 236.1 198 70.2
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.9e-60 235.3 196 69.4
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 6.6e-60 234.6 198 70.7
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 8.6e-60 234.2 195 69.2
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.1e-59 233.8 166 78.3
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.9e-59 233.0 199 65.3
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 2.5e-59 232.6 196 66.8
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 4.3e-59 231.9 181 72.4
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 5.6e-59 231.5 161 75.2
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 7.3e-59 231.1 201 67.2
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 9.5e-59 230.7 175 72.0
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.2e-58 230.3 195 68.7
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.2e-58 230.3 210 66.7
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.6e-58 229.9 165 75.2
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.6e-58 229.9 195 69.2
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.6e-58 229.9 198 70.2
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 2.1e-58 229.6 196 66.8
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 4.7e-58 228.4 197 69.0
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 4.7e-58 228.4 165 77.0
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 6.2e-58 228.0 178 72.5
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 8.1e-58 227.6 198 66.7
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 8.1e-58 227.6 197 67.0
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 8.1e-58 227.6 184 72.8
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.1e-57 227.3 197 66.5
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.1e-57 227.3 196 66.3
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.1e-57 227.3 148 83.1
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.4e-57 226.9 193 68.4
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 1.4e-57 226.9 194 68.0
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 3.1e-57 225.7 142 83.8
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.0e-57 225.3 192 67.7
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 5.2e-57 224.9 192 67.7
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 5.2e-57 224.9 146 82.2
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 6.8e-57 224.6 199 64.8
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 8.9e-57 224.2 197 66.5
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 8.9e-57 224.2 196 65.8
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.2e-56 223.8 197 67.5
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 1.2e-56 223.8 192 67.2
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 1.2e-56 223.8 195 64.6
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 1.5e-56 223.4 197 66.0
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.5e-56 223.4 196 64.8
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 2.0e-56 223.0 197 64.5
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 2.6e-56 222.6 200 67.5
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 4.4e-56 221.9 194 67.0
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.4e-56 221.9 171 73.7
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 5.8e-56 221.5 197 66.0
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 7.6e-56 221.1 196 64.3
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 1.3e-55 220.3 197 67.0
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.3e-55 220.3 171 71.3
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.2e-55 219.5 146 79.5
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 2.2e-55 219.5 138 84.8
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.2e-55 219.5 138 84.8
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.9e-55 219.2 146 81.5
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 4.9e-55 218.4 141 83.0
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 4.9e-55 218.4 141 83.0
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 4.9e-55 218.4 141 83.0
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 4.9e-55 218.4 141 83.0
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 6.4e-55 218.0 164 73.2
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 8.4e-55 217.6 199 66.8
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.4e-54 216.9 140 82.9
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.9e-54 216.5 172 69.2
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.9e-54 216.5 203 63.5
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.4e-54 216.1 145 78.6
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 2.4e-54 216.1 138 83.3
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 5.4e-54 214.9 192 64.6
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 7.1e-54 214.5 196 65.8
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 7.1e-54 214.5 147 81.0
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 7.1e-54 214.5 146 79.5
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 9.2e-54 214.2 173 69.9
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.2e-53 213.8 197 62.9
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 2.7e-53 212.6 139 81.3
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 3.5e-53 212.2 138 83.3
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 4.6e-53 211.8 171 70.2
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.0e-52 210.7 151 77.5
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.3e-52 210.3 176 69.3
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.3e-52 210.3 199 61.8
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 3.0e-52 209.1 164 72.6
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 6.6e-52 208.0 172 69.8
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.9e-51 206.5 115 93.9
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 3.3e-51 205.7 132 81.8
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 3.3e-51 205.7 198 63.1
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 4.3e-51 205.3 194 61.9
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 3.6e-50 202.2 112 94.6
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 6.2e-50 201.4 113 92.9
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 8.1e-50 201.1 165 70.9
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.4e-49 200.3 115 90.4
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.4e-49 200.3 115 90.4
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 2.4e-49 199.5 142 78.2
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 6.9e-49 198.0 201 58.7
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 9.9e-48 194.1 113 89.4
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.4e-46 190.3 175 61.1
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.6e-45 186.8 196 60.2
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.5e-45 185.7 196 59.7
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 6.6e-44 181.4 192 58.3
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.9e-43 179.9 135 68.1
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.3e-43 178.7 192 57.8
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 9.6e-43 177.6 138 69.6
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.6e-42 176.8 197 53.3
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 8.1e-42 174.5 111 82.9
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.1e-41 174.1 220 53.2
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 2.4e-41 172.9 109 78.9
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 6.9e-41 171.4 159 64.8
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 6.9e-41 171.4 156 63.5
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 3.4e-40 169.1 348 37.4
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 8.4e-39 164.5 173 58.4
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.1e-38 164.1 149 58.4
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 7.9e-37 157.9 114 73.7
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.5e-35 153.7 113 69.9
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 1.9e-35 153.3 111 69.4
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.7e-34 149.1 162 59.9
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 3.0e-28 129.4 109 59.6
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 5.6e-27 125.2 99 68.7
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.6e-26 123.6 129 62.8
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 6.2e-26 121.7 132 50.8
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 5.8e-24 115.2 91 70.3
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 4.9e-23 112.1 86 70.9
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 8.4e-23 111.3 91 68.1
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 1.9e-22 110.2 87 72.4
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-21 107.5 87 71.3
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 1.2e-21 107.5 87 71.3
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 2.6e-16 89.7 88 58.0
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.2e-13 80.9 63 66.7
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.6e-13 80.5 49 83.7
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 7.9e-13 78.2 44 90.9
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 1.4e-09 67.4 39 84.6
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 5.0e-07 58.9 83 45.8
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 4.2e-06 55.8 94 43.6
AagrBONN_evm.TU.Sc2ySwM_362.2265 Anthoceros agrestis HOM05D010958 ORTHO05D004381 4.2e-06 55.8 85 42.4
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 7.2e-06 55.1 90 42.2
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 7.2e-06 55.1 90 42.2
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 7.2e-06 55.1 90 42.2
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 7.2e-06 55.1 90 42.2


User provided reference genes

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