Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 3.1e-104 381.7 182 100.0
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 7.9e-100 367.1 182 94.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 5.2e-59 231.5 141 70.9
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.6e-58 229.2 139 72.7
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.7e-57 226.5 166 61.4
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 1.7e-57 226.5 153 67.3
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 6.4e-57 224.6 132 72.7
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.4e-56 223.4 165 63.0
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.8e-56 223.0 127 74.0
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 4.1e-56 221.9 126 73.8
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 5.4e-56 221.5 176 58.5
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 3.5e-55 218.8 133 72.2
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 4.6e-55 218.4 149 63.8
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.3e-54 216.1 163 62.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 3.9e-54 215.3 142 67.6
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 8.6e-54 214.2 149 61.7
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 1.1e-53 213.8 148 64.9
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.5e-53 213.4 138 65.2
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 1.5e-53 213.4 148 63.5
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.9e-53 213.0 162 58.6
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 2.5e-53 212.6 144 64.6
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.3e-53 212.2 153 62.7
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.3e-53 211.8 135 67.4
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 4.3e-53 211.8 153 62.7
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 4.3e-53 211.8 149 63.1
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 4.3e-53 211.8 137 66.4
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 7.3e-53 211.1 130 66.9
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.2e-52 210.3 139 65.5
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.6e-52 209.9 127 68.5
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 3.6e-52 208.8 141 66.7
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 3.6e-52 208.8 143 60.8
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 4.7e-52 208.4 144 62.5
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 4.7e-52 208.4 146 61.0
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 6.2e-52 208.0 162 58.6
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.4e-51 206.8 143 62.9
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 1.4e-51 206.8 125 70.4
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.4e-51 206.8 150 61.3
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.8e-51 206.5 162 60.5
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.8e-51 206.5 138 65.2
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 2.3e-51 206.1 184 57.1
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 2.3e-51 206.1 149 60.4
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.3e-51 206.1 126 69.8
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 3.1e-51 205.7 144 59.7
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 3.1e-51 205.7 162 58.0
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 5.2e-51 204.9 140 63.6
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 6.8e-51 204.5 139 63.3
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.2e-50 203.8 180 54.4
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.2e-50 203.8 139 59.7
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.5e-50 203.4 154 62.3
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 2.0e-50 203.0 163 56.4
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 2.0e-50 203.0 182 55.5
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 2.0e-50 203.0 162 57.4
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.0e-50 203.0 142 62.0
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 2.0e-50 203.0 138 62.3
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 2.6e-50 202.6 144 62.5
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 2.6e-50 202.6 125 65.6
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 7.5e-50 201.1 158 56.3
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 7.5e-50 201.1 126 67.5
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 9.8e-50 200.7 161 57.8
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.7e-49 199.9 177 52.0
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 3.7e-49 198.7 167 52.7
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 3.7e-49 198.7 116 72.4
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.4e-49 198.0 145 60.7
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.1e-48 197.2 161 57.8
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.4e-48 196.8 140 57.9
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 1.4e-48 196.8 149 56.4
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 1.9e-48 196.4 185 54.1
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 2.4e-48 196.1 118 67.8
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 3.2e-48 195.7 145 60.0
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.2e-48 195.7 145 60.0
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.2e-48 195.7 145 60.0
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 4.1e-48 195.3 168 54.8
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 4.1e-48 195.3 146 61.0
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.5e-47 192.2 168 53.0
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.5e-45 186.0 163 53.4
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 9.5e-45 184.1 162 53.7
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 9.5e-45 184.1 136 59.6
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 2.1e-44 183.0 118 65.3
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 5.2e-43 178.3 120 61.7
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 9.8e-42 174.1 123 61.8
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 3.7e-41 172.2 122 60.7
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.1e-40 170.6 112 66.1
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.9e-40 169.9 144 56.2
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 2.1e-39 166.4 147 49.0
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 5.1e-38 161.8 123 60.2
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 5.1e-38 161.8 171 45.0
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 3.3e-37 159.1 108 61.1
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 3.6e-36 155.6 123 58.5
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 8.9e-35 151.0 151 47.7
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 8.9e-35 151.0 88 72.7
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.6e-34 149.4 160 46.2
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 3.8e-33 145.6 138 51.4
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 4.9e-33 145.2 151 46.4
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.7e-30 136.7 155 43.9
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.5e-29 133.7 86 66.3
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.6e-26 122.9 86 58.1
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.2e-18 97.4 56 71.4
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 9.6e-13 77.8 54 61.1
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 2.1e-12 76.6 62 58.1
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 3.6e-12 75.9 166 27.7
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.2e-10 70.9 59 59.3


User provided reference genes

Program Settings