Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2303 Papaver somniferum HOM05D001952 ORTHO05D005047 2.4e-173 612.1 313 100.0
PSO063G6730 Papaver somniferum HOM05D001952 ORTHO05D005047 5.8e-167 590.9 313 97.1
CSS0043642 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 2.9e-126 455.7 313 74.4
TWI38G1551 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 6.5e-126 454.5 313 75.1
CiPaw.01G274000 Carya illinoinensis HOM05D001952 ORTHO05D005047 7.2e-125 451.1 313 74.8
QL08p056315 Quercus lobata HOM05D001952 ORTHO05D005047 2.1e-124 449.5 312 73.7
TWI15G0762 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 2.7e-124 449.1 313 74.1
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 6.1e-124 448.0 316 71.5
Thecc.10G071300 Theobroma cacao HOM05D001952 ORTHO05D005047 6.1e-124 448.0 313 72.2
TAR633G1943 Trochodendron aralioides HOM05D001952 ORTHO05D005047 7.9e-124 447.6 316 71.8
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 1.0e-123 447.2 303 75.2
TAR623G1191 Trochodendron aralioides HOM05D001952 ORTHO05D005047 1.8e-123 446.4 316 71.8
Actinidia38268 Actinidia chinensis HOM05D001952 ORTHO05D005047 2.3e-123 446.0 305 72.8
Duzib106G0378 Durio zibethinus HOM05D001952 ORTHO05D005047 3.0e-123 445.7 305 72.1
CANSAT56G1702 Cannabis sativa HOM05D001952 ORTHO05D005047 5.1e-123 444.9 313 71.9
RcHm_v2.0_Chr1g0363681 Rosa chinensis HOM05D001952 ORTHO05D005047 1.5e-122 443.4 313 70.6
Lj1C916T4 Lonicera japonica HOM05D001952 ORTHO05D005047 3.3e-122 442.2 313 70.9
Actinidia03051 Actinidia chinensis HOM05D001952 ORTHO05D005047 4.4e-122 441.8 305 73.4
GSVIVG01016297001 Vitis vinifera HOM05D001952 ORTHO05D005047 7.4e-122 441.0 316 70.6
Aqoxy7G02906 Aquilegia oxysepala HOM05D001952 ORTHO05D005047 1.3e-121 440.3 316 72.8
Manes.07G104300 Manihot esculenta HOM05D001952 ORTHO05D005047 1.7e-121 439.9 313 71.2
FAN10G0547 Fragaria x ananassa HOM05D001952 ORTHO05D005047 1.8e-120 436.4 313 70.0
Gohir.D10G215100 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.8e-120 436.4 300 72.0
FAN03G1754 Fragaria x ananassa HOM05D001952 ORTHO05D005047 2.4e-120 436.0 313 69.6
Gohir.A10G207000 Gossypium hirsutum HOM05D001952 ORTHO05D005047 2.4e-120 436.0 300 72.0
Potri.010G220900 Populus trichocarpa HOM05D001952 ORTHO05D005047 3.1e-120 435.6 313 70.0
Rhsim03G0124200 Rhododendron simsii HOM05D001952 ORTHO05D005047 3.1e-120 435.6 305 73.1
Gorai.011G240600 Gossypium raimondii HOM05D001952 ORTHO05D005047 5.3e-120 434.9 300 71.7
MD07G1176100 Malus domestica HOM05D001952 ORTHO05D005047 7.0e-120 434.5 313 70.3
Rhsim09G0040900 Rhododendron simsii HOM05D001952 ORTHO05D005047 9.1e-120 434.1 305 72.5
Gohir.D04G003200 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.5e-119 433.3 305 70.8
Gorai.012G004300 Gossypium raimondii HOM05D001952 ORTHO05D005047 1.5e-119 433.3 305 70.8
Lalb_Chr01g0010101 Lupinus albus HOM05D001952 ORTHO05D005047 1.5e-119 433.3 313 70.9
FvH4_7g19770 Fragaria vesca HOM05D001952 ORTHO05D005047 2.0e-119 433.0 313 69.3
Prupe.8G142500 Prunus persica HOM05D001952 ORTHO05D005047 2.0e-119 433.0 313 69.3
Sc20g0001940 Simmondsia chinensis HOM05D001952 ORTHO05D005047 2.0e-119 433.0 316 69.0
Hma1.2p1_0063F.1_g034440 Hydrangea macrophylla HOM05D001952 ORTHO05D005047 7.7e-119 431.0 309 70.9
Nn2g10756 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.0e-118 430.6 316 70.6
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 1.3e-118 430.3 303 71.0
FAN01G0922 Fragaria x ananassa HOM05D001952 ORTHO05D005047 1.3e-118 430.3 312 69.9
MELO3C002900.2 Cucumis melo HOM05D001952 ORTHO05D005047 1.7e-118 429.9 313 68.7
CsaV3_5G025750 Cucumis sativus L. HOM05D001952 ORTHO05D005047 2.2e-118 429.5 313 69.0
CSS0010121 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 2.9e-118 429.1 305 71.5
THA.LOC104809877 Tarenaya hassleriana HOM05D001952 ORTHO05D005047 3.8e-118 428.7 305 70.2
Gohir.A05G412900 Gossypium hirsutum HOM05D001952 ORTHO05D005047 6.5e-118 427.9 305 69.8
Ciclev10032201m.g Citrus clementina HOM05D001952 ORTHO05D005047 1.4e-117 426.8 307 71.3
SGA_v2.0_scaffold341G49359 Striga asiatica HOM05D001952 ORTHO05D005047 1.9e-117 426.4 315 69.2
PSO384G3798 Papaver somniferum HOM05D001952 ORTHO05D005047 3.2e-117 425.6 316 69.9
Peaxi162Scf00272g00023 Petunia axillaris HOM05D001952 ORTHO05D005047 3.2e-117 425.6 301 71.8
PGR044G1956 Punica granatum HOM05D001952 ORTHO05D005047 1.2e-116 423.7 313 67.7
SalBow3G3659 Salvia bowleyana HOM05D001952 ORTHO05D005047 8.0e-116 421.0 315 68.9
Sed0013357 Sechium edule HOM05D001952 ORTHO05D005047 8.0e-116 421.0 313 67.7
Sopen04g018690 Solanum pennellii HOM05D001952 ORTHO05D005047 3.9e-115 418.7 301 70.4
HanXRQChr09g0246441 Helianthus annuus HOM05D001952 ORTHO05D005047 5.2e-115 418.3 306 68.3
Lsat_1_v5_gn_9_68641 Lactuca sativa HOM05D001952 ORTHO05D005047 5.2e-115 418.3 308 67.9
PSO339G4598 Papaver somniferum HOM05D001952 ORTHO05D005047 5.2e-115 418.3 316 69.0
Lj2g0017031 Lotus japonicus HOM05D001952 ORTHO05D005047 8.8e-115 417.5 305 69.8
Hund12040 Selenicereus undatus HOM05D001952 ORTHO05D005047 8.8e-115 417.5 309 69.3
MSTRG.27460 Avicennia marina HOM05D001952 ORTHO05D005047 1.5e-114 416.8 301 70.8
ECA232G3999 Erigeron canadensis HOM05D001952 ORTHO05D005047 1.5e-114 416.8 301 68.4
Psat6g185440 Pisum sativum HOM05D001952 ORTHO05D005047 1.5e-114 416.8 300 71.3
MSTRG.8150 Avicennia marina HOM05D001952 ORTHO05D005047 3.3e-114 415.6 296 69.9
CAN.G4.5 Capsicum annuum HOM05D001952 ORTHO05D005047 4.4e-114 415.2 301 69.8
VMungo0464G0347 Vigna mungo HOM05D001952 ORTHO05D005047 4.4e-114 415.2 313 67.4
Atru.chr12.731 Acer truncatum HOM05D001952 ORTHO05D005047 5.7e-114 414.8 305 68.2
Phvul.004G071600 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 5.7e-114 414.8 313 67.7
Solyc04g049180.3 Solanum lycopersicum HOM05D001952 ORTHO05D005047 5.7e-114 414.8 301 69.8
Sabra10G0170600 Salix brachista HOM05D001952 ORTHO05D005047 1.3e-113 413.7 348 63.5
TPR.G36683 Trifolium pratense HOM05D001952 ORTHO05D005047 4.8e-113 411.8 300 72.0
Eucgr.J01098 Eucalyptus grandis HOM05D001952 ORTHO05D005047 6.3e-113 411.4 308 65.6
ATR0115G026 Amborella trichopoda HOM05D001952 ORTHO05D005047 8.2e-113 411.0 318 66.4
COL.COLO4_23705 Corchorus olitorius HOM05D001952 ORTHO05D005047 1.8e-112 409.8 386 57.3
vmacro07078 Vaccinium macrocarpon HOM05D001952 ORTHO05D005047 1.8e-112 409.8 313 68.7
MBI07_g41454_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 2.4e-112 409.5 310 66.8
Potri.008G041100 Populus trichocarpa HOM05D001952 ORTHO05D005047 2.4e-112 409.5 313 66.5
DCAR_006448 Daucus carota HOM05D001952 ORTHO05D005047 3.1e-112 409.1 350 61.1
Migut.F02000 Erythranthe guttata HOM05D001952 ORTHO05D005047 7.0e-112 407.9 314 68.2
Phvul.007G093800 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 7.0e-112 407.9 312 67.9
Glyma.10G212100 Glycine max HOM05D001952 ORTHO05D005047 3.5e-111 405.6 276 73.6
arahy.Tifrunner.gnm1.ann1.I356LV Arachis hypogaea HOM05D001952 ORTHO05D005047 1.3e-110 403.7 313 67.1
Glyma.16G145700 Glycine max HOM05D001952 ORTHO05D005047 2.2e-110 402.9 313 67.1
Cpa.g.sc53.62 Carica papaya HOM05D001952 ORTHO05D005047 3.8e-110 402.1 300 69.7
ClCG09G020640 Citrullus lanatus HOM05D001952 ORTHO05D005047 6.5e-110 401.4 354 60.5
Glyma.02G064500 Glycine max HOM05D001952 ORTHO05D005047 8.5e-110 401.0 313 66.5
Lj5g0021726 Lotus japonicus HOM05D001952 ORTHO05D005047 8.5e-110 401.0 301 67.4
Medtr1g095490 Medicago truncatula HOM05D001952 ORTHO05D005047 8.5e-110 401.0 285 70.2
TPR.G1807 Trifolium pratense HOM05D001952 ORTHO05D005047 8.5e-110 401.0 285 70.2
AUR62036746 Chenopodium quinoa HOM05D001952 ORTHO05D005047 1.9e-109 399.8 313 64.9
Duzib114G0604 Durio zibethinus HOM05D001952 ORTHO05D005047 2.1e-108 396.4 269 71.7
Gorai.013G026100 Gossypium raimondii HOM05D001952 ORTHO05D005047 2.7e-108 396.0 294 67.3
arahy.Tifrunner.gnm1.ann1.BF0W30 Arachis hypogaea HOM05D001952 ORTHO05D005047 3.6e-108 395.6 300 66.3
arahy.Tifrunner.gnm1.ann1.GFW5PY Arachis hypogaea HOM05D001952 ORTHO05D005047 6.1e-108 394.8 300 66.0
Sabra08G0027900 Salix brachista HOM05D001952 ORTHO05D005047 8.0e-108 394.4 344 61.3
CSS0012304 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 1.8e-107 393.3 263 76.8
Ah.11g040520 Amaranthus hybridus HOM05D001952 ORTHO05D005047 4.0e-107 392.1 308 65.3
C05p59390 Brassica napus HOM05D001952 ORTHO05D005047 4.0e-107 392.1 305 65.6
BcaC05g29583 Brassica carinata HOM05D001952 ORTHO05D005047 6.7e-107 391.3 305 65.9
HPP92_014675 Vanilla planifolia HOM05D001952 ORTHO05D005047 6.7e-107 391.3 315 65.1
Gohir.D13G023300 Gossypium hirsutum HOM05D001952 ORTHO05D005047 8.8e-107 391.0 294 67.7
BolC5t34594H Brassica oleracea HOM05D001952 ORTHO05D005047 2.0e-106 389.8 300 66.0
AL3G19330 Arabidopsis lyrata HOM05D001952 ORTHO05D005047 3.3e-106 389.0 305 66.2
A05p40310 Brassica napus HOM05D001952 ORTHO05D005047 3.3e-106 389.0 305 65.6
Nitab4.5_0001352g0010 Nicotiana tabacum HOM05D001952 ORTHO05D005047 4.4e-106 388.7 301 67.4
Sp3g06860 Schrenkiella parvula HOM05D001952 ORTHO05D005047 5.7e-106 388.3 305 65.9
BcaC09g47964 Brassica carinata HOM05D001952 ORTHO05D005047 7.5e-106 387.9 313 63.9
Aa31LG5G18490 Aethionema arabicum HOM05D001952 ORTHO05D005047 9.7e-106 387.5 305 64.6
BcaB04g21262 Brassica carinata HOM05D001952 ORTHO05D005047 9.7e-106 387.5 313 64.2
CARHR082690 Cardamine hirsuta HOM05D001952 ORTHO05D005047 1.3e-105 387.1 305 65.9
BolC1t05516H Brassica oleracea HOM05D001952 ORTHO05D005047 1.7e-105 386.7 300 65.3
BcaB03g11556 Brassica carinata HOM05D000484 ORTHO05D005047 2.2e-105 386.3 285 67.0
Thhalv10021192m.g Eutrema salsugineum HOM05D001952 ORTHO05D005047 2.2e-105 386.3 308 64.9
AT3G07950 Arabidopsis thaliana HOM05D001952 ORTHO05D005047 6.3e-105 384.8 305 65.6
Carub.0003s0752 Capsella rubella HOM05D001952 ORTHO05D005047 1.1e-104 384.0 305 64.9
Nitab4.5_0000233g0070 Nicotiana tabacum HOM05D001952 ORTHO05D005047 1.1e-104 384.0 289 67.8
EL10Ac1g02054 Beta vulgaris HOM05D001952 ORTHO05D005047 4.1e-104 382.1 351 58.1
Oeu043934.2 Olea europaea HOM05D001952 ORTHO05D005047 4.1e-104 382.1 265 70.9
CiPaw.02G174800 Carya illinoinensis HOM05D001952 ORTHO05D005047 5.3e-104 381.7 276 69.9
Lsat_1_v5_gn_8_19940 Lactuca sativa HOM05D001952 ORTHO05D005047 5.9e-103 378.3 288 64.2
SEGI_02403 Sequoiadendron giganteum HOM05D001952 ORTHO05D005047 7.7e-103 377.9 308 61.0
AUR62013854 Chenopodium quinoa HOM05D001952 ORTHO05D005047 1.6e-100 370.2 277 65.3
CDE10G0691 Ceratophyllum demersum HOM05D001952 ORTHO05D005047 2.7e-100 369.4 316 59.8
FAN06G0112 Fragaria x ananassa HOM05D001952 ORTHO05D005047 8.0e-100 367.9 261 69.7
Os03g0358200 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 9.8e-98 360.9 289 64.7
Os07g0655400 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 3.7e-97 359.0 301 63.5
unitig_0.g2136 Utricularia gibba HOM05D001952 ORTHO05D005047 1.2e-95 354.0 301 60.5
Dinv31333 Davidia involucrata HOM05D001952 ORTHO05D005047 3.5e-95 352.4 310 61.0
Zm00001eb110580 Zea mays HOM05D001952 ORTHO05D005047 5.9e-95 351.7 308 62.0
Cc09_g01990 Coffea canephora HOM05D001952 ORTHO05D005047 3.0e-91 339.3 229 69.9
Zm00001eb394380 Zea mays HOM05D001952 ORTHO05D005047 2.4e-88 329.7 266 61.3
Mapoly0066s0031 Marchantia polymorpha HOM05D001952 ORTHO05D005047 5.6e-85 318.5 288 54.9
AagrBONN_evm.TU.Sc2ySwM_344.4977 Anthoceros agrestis HOM05D001952 ORTHO05D005047 4.4e-82 308.9 292 52.7
Gohir.A13G024400 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.3e-81 307.4 222 70.7
Os04g0103300 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 1.4e-80 303.9 282 55.3
ATR0559G188 Amborella trichopoda HOM05D001952 ORTHO05D005047 3.5e-79 299.3 297 51.5
SMO140G0041 Selaginella moellendorffii HOM05D001952 ORTHO05D005047 1.9e-77 293.5 273 53.1
Zm00001eb089590 Zea mays HOM05D001952 ORTHO05D005047 9.5e-77 291.2 295 51.2
SHI07338 Sapria himalayana HOM05D001952 ORTHO05D005047 1.2e-76 290.8 276 56.2
Zm00001eb418910 Zea mays HOM05D001952 ORTHO05D005047 1.2e-76 290.8 314 49.7
Pp3c16_4780 Physcomitrium patens HOM05D001952 ORTHO05D005047 6.2e-76 288.5 293 52.2
Pp3c27_5280 Physcomitrium patens HOM05D001952 ORTHO05D005047 5.8e-74 282.0 292 52.1
unitig_736.g22520 Utricularia gibba HOM05D001952 ORTHO05D005047 1.3e-73 280.8 282 50.0
SalBow4G0807 Salvia bowleyana HOM05D001952 ORTHO05D005047 1.5e-69 267.3 297 51.5
Nn2g10413 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.1e-68 263.5 242 53.3
Zm00001eb017450 Zea mays HOM05D001952 ORTHO05D005047 4.7e-68 262.3 230 60.4
arahy.Tifrunner.gnm1.ann1.1JAQ89 Arachis hypogaea HOM05D001952 ORTHO05D005047 2.2e-65 253.4 207 64.3
MBI17_g17186_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 1.1e-59 234.6 329 48.0
CBR_g52157 Chara braunii HOM05D001952 ORTHO05D005047 2.0e-58 230.3 223 52.5
Lalb_Chr19g0129631 Lupinus albus HOM05D001952 ORTHO05D005047 1.3e-57 227.6 199 62.3
TAR633G1124 Trochodendron aralioides HOM05D002354 ORTHO05D002469 2.4e-56 223.4 214 53.7
ECA233G5952 Erigeron canadensis HOM05D001952 ORTHO05D005047 3.3e-53 213.0 174 61.5
arahy.Tifrunner.gnm1.ann1.RZKK0D Arachis hypogaea HOM05D001952 ORTHO05D005047 3.1e-51 206.5 218 54.1
Oeu052143.1 Olea europaea HOM05D001952 ORTHO05D005047 2.6e-50 203.4 149 67.8
MD01G1110300 Malus domestica HOM05D001952 ORTHO05D005047 1.9e-48 197.2 153 66.0
Cre17.g706850 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D005047 6.0e-47 192.2 280 37.9
unitig_747.g21458 Utricularia gibba HOM05D001952 ORTHO05D005047 6.0e-47 192.2 186 55.9
Migut.F01769 Erythranthe guttata HOM05D001952 ORTHO05D005047 1.5e-42 177.6 154 63.6
MCO03G295 Micromonas commoda HOM05D001952 ORTHO05D005047 3.7e-36 156.4 287 33.4
MCO07G038 Micromonas commoda HOM05D001952 ORTHO05D005047 4.9e-33 146.0 329 29.8
arahy.Tifrunner.gnm1.ann1.1BY4XL Arachis hypogaea HOM05D001952 ORTHO05D005047 8.7e-30 135.2 108 63.0
PRCOL_00004972 Prasinoderma coloniale HOM05D001952 ORTHO05D005047 1.4e-24 117.9 276 30.8
Nn1g06899 Nelumbo nucifera HOM05D001952 ORTHO05D005047 9.3e-24 115.2 76 73.7
Ca_12760_v3 Cicer arietinum L. HOM05D001952 ORTHO05D005047 3.5e-23 113.2 112 55.4
Cfa025342 Carpinus fangiana HOM05D001952 ORTHO05D005047 7.9e-23 112.1 311 27.0
arahy.Tifrunner.gnm1.ann1.PMPU7Y Arachis hypogaea HOM05D001952 ORTHO05D005047 1.0e-22 111.7 134 47.0
PRCOL_00006255 Prasinoderma coloniale HOM05D000177 ORTHO05D002683 3.7e-20 103.2 298 30.5
MBI19_g20119_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 3.7e-12 76.6 187 35.8
CBR_g52155 Chara braunii HOM05D001952 ORTHO05D134355 2.2e-09 67.4 61 52.5
unitig_747.g21459 Utricularia gibba HOM05D001952 ORTHO05D005047 6.1e-07 59.3 40 65.0


User provided reference genes

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