Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2282 Papaver somniferum HOM05D004482 ORTHO05D005212 3.4e-168 595.1 345 100.0
PSO384G1658 Papaver somniferum HOM05D004482 ORTHO05D005212 7.6e-152 540.8 345 93.3
TAR362G0107 Trochodendron aralioides HOM05D004482 ORTHO05D005212 6.5e-119 431.4 343 68.8
GSVIVG01020907001 Vitis vinifera HOM05D004482 ORTHO05D005212 2.1e-109 399.8 333 65.2
Ciclev10005271m.g Citrus clementina HOM05D004482 ORTHO05D005212 7.2e-102 374.8 330 61.2
Atru.chr4.1674 Acer truncatum HOM05D004482 ORTHO05D005212 1.5e-99 367.1 339 58.4
Manes.15G054600 Manihot esculenta HOM05D004482 ORTHO05D005212 4.4e-99 365.5 334 59.9
COL.COLO4_20166 Corchorus olitorius HOM05D004482 ORTHO05D005212 5.7e-99 365.2 341 57.8
Actinidia11419 Actinidia chinensis HOM05D004482 ORTHO05D005212 2.8e-98 362.8 343 58.6
Cc03_g07940 Coffea canephora HOM05D004482 ORTHO05D005212 6.3e-98 361.7 342 58.5
Aqoxy2G00031 Aquilegia oxysepala HOM05D004482 ORTHO05D005212 1.4e-97 360.5 329 60.8
CsaV3_2G011600 Cucumis sativus L. HOM05D004482 ORTHO05D005212 1.4e-97 360.5 341 57.5
Cpa.g.sc443.1 Carica papaya HOM05D004482 ORTHO05D005212 1.8e-97 360.1 349 57.3
MELO3C020442.2 Cucumis melo HOM05D004482 ORTHO05D005212 5.3e-97 358.6 335 57.9
Gorai.005G031400 Gossypium raimondii HOM05D004482 ORTHO05D005212 7.0e-97 358.2 341 56.9
Nn3g19571 Nelumbo nucifera HOM05D004482 ORTHO05D005212 1.2e-96 357.5 348 60.1
FvH4_4g13790 Fragaria vesca HOM05D004482 ORTHO05D005212 3.5e-96 355.9 329 59.6
FAN12G3502 Fragaria x ananassa HOM05D004482 ORTHO05D005212 3.5e-96 355.9 329 59.6
Lj3C404T0 Lonicera japonica HOM05D004482 ORTHO05D005212 5.9e-96 355.1 356 58.4
Gohir.D02G025500 Gossypium hirsutum HOM05D004482 ORTHO05D005212 7.7e-96 354.8 341 56.6
Prupe.1G010300 Prunus persica HOM05D004482 ORTHO05D005212 7.7e-96 354.8 330 58.8
Duzib212G0483 Durio zibethinus HOM05D004482 ORTHO05D005212 1.7e-95 353.6 341 56.3
ECA233G3015 Erigeron canadensis HOM05D004482 ORTHO05D005212 3.8e-95 352.4 329 59.9
Gohir.A02G021300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 3.8e-95 352.4 341 56.0
Lj3A407G37 Lonicera japonica HOM05D004482 ORTHO05D005212 1.5e-94 350.5 366 57.1
RcHm_v2.0_Chr4g0414711 Rosa chinensis HOM05D004482 ORTHO05D005212 1.9e-94 350.1 329 58.4
ClCG06G007870 Citrullus lanatus HOM05D004482 ORTHO05D005212 3.2e-94 349.4 352 56.0
Cfa014938 Carpinus fangiana HOM05D004482 ORTHO05D005212 7.2e-94 348.2 328 58.8
Potri.017G056800 Populus trichocarpa HOM05D004482 ORTHO05D005212 7.2e-94 348.2 328 59.8
Thecc.04G200900 Theobroma cacao HOM05D004482 ORTHO05D005212 1.2e-93 347.4 341 55.1
Nn3g19999 Nelumbo nucifera HOM05D004482 ORTHO05D005212 4.7e-93 345.5 330 59.7
CiPaw.01G120200 Carya illinoinensis HOM05D004482 ORTHO05D005212 1.8e-92 343.6 328 59.1
Peaxi162Scf00753g00331 Petunia axillaris HOM05D004482 ORTHO05D005212 2.3e-92 343.2 348 55.2
Migut.N00400 Erythranthe guttata HOM05D004482 ORTHO05D005212 3.0e-92 342.8 340 55.0
Medtr8g085350 Medicago truncatula HOM05D004482 ORTHO05D005212 4.0e-92 342.4 330 57.6
MD04G1010600 Malus domestica HOM05D004482 ORTHO05D005212 5.2e-92 342.0 330 56.7
MD00G1113200 Malus domestica HOM05D004482 ORTHO05D005212 6.8e-92 341.7 330 56.4
TPR.G11944 Trifolium pratense HOM05D004482 ORTHO05D005212 6.8e-92 341.7 335 57.3
FAN17G0447 Fragaria x ananassa HOM05D004482 ORTHO05D005212 8.8e-92 341.3 358 55.0
Gohir.D02G027800 Gossypium hirsutum HOM05D004482 ORTHO05D005212 8.8e-92 341.3 341 55.4
Lj4g0012954 Lotus japonicus HOM05D004482 ORTHO05D005212 8.8e-92 341.3 330 57.9
Psat7g074240 Pisum sativum HOM05D004482 ORTHO05D005212 1.2e-91 340.9 330 57.9
SGA_v2.0_scaffold31G12588 Striga asiatica HOM05D004482 ORTHO05D005212 2.0e-91 340.1 352 54.0
Sopen09g034910 Solanum pennellii HOM05D004482 ORTHO05D005212 2.6e-91 339.7 351 54.7
PGR083G2076 Punica granatum HOM05D004482 ORTHO05D005212 5.7e-91 338.6 333 56.8
MSTRG.24610 Avicennia marina HOM05D004482 ORTHO05D005212 7.5e-91 338.2 340 55.9
CAN.G1333.13 Capsicum annuum HOM05D004482 ORTHO05D005212 7.5e-91 338.2 345 55.1
Rhsim02G0059000 Rhododendron simsii HOM05D004482 ORTHO05D005212 9.8e-91 337.8 378 51.9
Oeu013809.1 Olea europaea HOM05D004482 ORTHO05D005212 1.3e-90 337.4 355 53.8
Sed0019182 Sechium edule HOM05D004482 ORTHO05D005212 1.3e-90 337.4 334 56.9
Sed0016107 Sechium edule HOM05D004482 ORTHO05D005212 2.2e-90 336.7 330 57.0
Hma1.2p1_0187F.1_g082340 Hydrangea macrophylla HOM05D004482 ORTHO05D005212 2.8e-90 336.3 362 55.2
Lalb_Chr07g0186731 Lupinus albus HOM05D004482 ORTHO05D005212 3.7e-90 335.9 343 55.1
HanXRQChr16g0497991 Helianthus annuus HOM05D004482 ORTHO05D005212 4.8e-90 335.5 344 55.2
MBI19_g24734_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 6.3e-90 335.1 418 51.7
Solyc09g092030.4 Solanum lycopersicum HOM05D004482 ORTHO05D005212 8.3e-90 334.7 351 54.4
Glyma.08G111900 Glycine max HOM05D004482 ORTHO05D005212 1.4e-89 334.0 329 57.4
Duzib151G0803 Durio zibethinus HOM05D004482 ORTHO05D005212 3.1e-89 332.8 359 52.6
arahy.Tifrunner.gnm1.ann1.ENCW2M Arachis hypogaea HOM05D004482 ORTHO05D005212 5.4e-89 332.0 361 55.1
Glyma.05G154100 Glycine max HOM05D004482 ORTHO05D005212 5.4e-89 332.0 329 57.8
HanXRQChr02g0059021 Helianthus annuus HOM05D004482 ORTHO05D005212 1.6e-88 330.5 349 54.7
Lsat_1_v5_gn_6_61160 Lactuca sativa HOM05D004482 ORTHO05D005212 2.0e-88 330.1 347 54.5
Ah.11g041390 Amaranthus hybridus HOM05D004482 ORTHO05D005212 6.5e-87 325.1 343 52.5
ATR1096G138 Amborella trichopoda HOM05D004482 ORTHO05D005212 6.5e-87 325.1 362 53.6
AUR62018590 Chenopodium quinoa HOM05D004482 ORTHO05D005212 6.5e-87 325.1 333 53.2
CANSAT78G1841 Cannabis sativa HOM05D004482 ORTHO05D005212 4.2e-86 322.4 344 52.6
EL10Ac4g09020 Beta vulgaris HOM05D004482 ORTHO05D005212 9.5e-86 321.2 333 53.8
Gohir.D02G027400 Gossypium hirsutum HOM05D004482 ORTHO05D005212 9.5e-86 321.2 341 52.8
TWI73G1291 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 3.6e-85 319.3 330 52.4
Peaxi162Scf00047g00420 Petunia axillaris HOM05D004482 ORTHO05D005212 8.0e-85 318.2 422 46.4
C03p21360 Brassica napus HOM05D004482 ORTHO05D005212 4.0e-84 315.8 330 54.2
Hund18995 Selenicereus undatus HOM05D004482 ORTHO05D005212 5.2e-84 315.5 351 51.6
A03p18310 Brassica napus HOM05D004482 ORTHO05D005212 8.8e-84 314.7 341 53.1
Carub.0004s1412 Capsella rubella HOM05D004482 ORTHO05D005212 8.8e-84 314.7 349 52.1
BcaC02g07886 Brassica carinata HOM05D004482 ORTHO05D005212 1.2e-83 314.3 330 53.3
AL4G28200 Arabidopsis lyrata HOM05D004482 ORTHO05D005212 1.5e-83 313.9 349 51.0
A04p25280 Brassica napus HOM05D004482 ORTHO05D005212 1.5e-83 313.9 330 53.9
BolC3t14519H Brassica oleracea HOM05D004482 ORTHO05D005212 1.5e-83 313.9 341 53.1
BraA03t11091Z Brassica rapa HOM05D004482 ORTHO05D005212 1.5e-83 313.9 341 52.5
BraA04t18031Z Brassica rapa HOM05D004482 ORTHO05D005212 1.5e-83 313.9 330 53.9
BolC4t27707H Brassica oleracea HOM05D004482 ORTHO05D005212 2.0e-83 313.5 330 53.3
Sp4g15100 Schrenkiella parvula HOM05D004482 ORTHO05D005212 2.0e-83 313.5 334 53.0
THA.LOC104826120 Tarenaya hassleriana HOM05D004482 ORTHO05D005212 2.0e-83 313.5 331 53.2
Dinv27224 Davidia involucrata HOM05D004482 ORTHO05D005212 3.7e-82 309.3 253 64.4
FAN22G1791 Fragaria x ananassa HOM05D004482 ORTHO05D005212 4.9e-82 308.9 437 44.6
QL06p025411 Quercus lobata HOM05D004482 ORTHO05D005212 8.3e-82 308.1 311 55.9
Aa31LG5G4410 Aethionema arabicum HOM05D004482 ORTHO05D005212 1.8e-81 307.0 366 48.6
AUR62020829 Chenopodium quinoa HOM05D004482 ORTHO05D005212 2.4e-81 306.6 352 50.0
arahy.Tifrunner.gnm1.ann1.R808EC Arachis hypogaea HOM05D004482 ORTHO05D005212 4.1e-81 305.8 311 56.3
AT2G32760 Arabidopsis thaliana HOM05D004482 ORTHO05D005212 2.0e-80 303.5 334 51.2
Ca_17968_v3 Cicer arietinum L. HOM05D004482 ORTHO05D005212 7.8e-80 301.6 307 56.7
vmacro15546 Vaccinium macrocarpon HOM05D004482 ORTHO05D005212 1.0e-79 301.2 449 43.2
HPP92_017061 Vanilla planifolia HOM05D004482 ORTHO05D005212 1.3e-79 300.8 339 51.9
Nitab4.5_0000401g0030 Nicotiana tabacum HOM05D004482 ORTHO05D005212 2.9e-79 299.7 315 54.3
C04p62340 Brassica napus HOM05D000474 ORTHO05D005212 6.6e-79 298.5 353 49.9
Nitab4.5_0006210g0070 Nicotiana tabacum HOM05D004482 ORTHO05D005212 2.5e-78 296.6 315 54.3
MBI19_g24366_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 1.2e-77 294.3 280 61.4
Eucgr.H02773 Eucalyptus grandis HOM05D004482 ORTHO05D005212 1.6e-77 293.9 298 56.7
unitig_8.g4998 Utricularia gibba HOM05D004482 ORTHO05D005212 4.7e-77 292.4 329 51.1
PGSC0003DMG400026426 Solanum tuberosum HOM05D004482 ORTHO05D005212 5.2e-76 288.9 319 52.0
FAN07G1054 Fragaria x ananassa HOM05D004482 ORTHO05D005212 3.4e-75 286.2 326 51.8
Lalb_Chr21g0313021 Lupinus albus HOM05D004482 ORTHO05D005212 7.5e-75 285.0 288 54.5
CDE09G1401 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 1.7e-74 283.9 349 50.1
Cpa.g.sc173.9 Carica papaya HOM05D004482 ORTHO05D005212 2.2e-74 283.5 288 54.5
Os06g0715000 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 2.9e-74 283.1 337 50.1
BcaB06g28632 Brassica carinata HOM05D004482 ORTHO05D005212 1.4e-73 280.8 330 50.3
CDE08G1272 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 2.4e-73 280.0 337 54.6
Sc19g0007180 Simmondsia chinensis HOM05D004482 ORTHO05D005212 2.0e-72 276.9 257 59.5
Gorai.006G223000 Gossypium raimondii HOM05D004482 ORTHO05D005212 3.0e-71 273.1 305 51.8
Gohir.D09G199300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.5e-70 270.8 296 52.7
Gohir.A09G205700 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.3e-70 269.2 296 52.0
Gohir.D02G025900 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.0e-68 262.7 219 63.0
Phvul.003G290900 Phaseolus vulgaris HOM05D004482 ORTHO05D005212 6.8e-68 261.9 298 51.3
Dinv38218 Davidia involucrata HOM05D004482 ORTHO05D005212 5.8e-67 258.8 255 57.6
Haze_11622 Corylus avellana HOM05D004482 ORTHO05D005212 7.5e-67 258.5 543 35.5
Thhalv10016939m.g Eutrema salsugineum HOM05D004482 ORTHO05D005212 2.9e-66 256.5 288 50.7
CARHR126650 Cardamine hirsuta HOM05D004482 ORTHO05D005212 1.1e-65 254.6 288 49.7
HanXRQChr10g0277641 Helianthus annuus HOM05D004482 ORTHO05D005212 1.7e-58 230.7 312 46.2
Lsat_1_v5_gn_2_46161 Lactuca sativa HOM05D004482 ORTHO05D005212 1.7e-55 220.7 316 43.4
Oeu006195.1 Olea europaea HOM05D004482 ORTHO05D005212 8.9e-52 208.4 298 46.0
Duzib212G1026 Durio zibethinus HOM05D004482 ORTHO05D005212 2.6e-51 206.8 158 66.5
Zm00001eb405320 Zea mays HOM05D004482 ORTHO05D005212 9.9e-51 204.9 199 58.3
Pp3c14_26480 Physcomitrium patens HOM05D004482 ORTHO05D005212 1.3e-50 204.5 329 39.5
BcaNung06790 Brassica carinata HOM05D004482 ORTHO05D005212 2.9e-50 203.4 244 50.0
SEGI_24214 Sequoiadendron giganteum HOM05D004482 ORTHO05D005212 4.1e-49 199.5 224 54.0
DCAR_001940 Daucus carota HOM05D004482 ORTHO05D005212 1.7e-47 194.1 327 41.3
DCAR_012443 Daucus carota HOM05D004482 ORTHO05D005212 6.6e-47 192.2 146 69.2
Peaxi162Scf61983g00004 Petunia axillaris HOM05D004482 ORTHO05D005212 5.6e-46 189.1 122 76.2
Mapoly0173s0024 Marchantia polymorpha HOM05D004482 ORTHO05D005212 6.2e-45 185.7 359 36.5
VMungo0251G0011 Vigna mungo HOM05D004482 ORTHO05D005212 8.1e-45 185.3 154 66.2
SalBow3G0632 Salvia bowleyana HOM05D004482 ORTHO05D005212 5.2e-44 182.6 237 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2912 Anthoceros agrestis HOM05D004482 ORTHO05D005212 8.7e-39 165.2 319 36.4
ECA238G0855 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.6e-38 162.5 172 53.5
SMO334G0086 Selaginella moellendorffii HOM05D004482 ORTHO05D005212 1.6e-37 161.0 299 37.5
Sabra17G0048500 Salix brachista HOM05D004482 ORTHO05D005212 2.1e-37 160.6 107 74.8
Sabra17G0050200 Salix brachista HOM05D004482 ORTHO05D005212 2.1e-37 160.6 107 74.8
Gohir.D02G025833 Gossypium hirsutum HOM05D004482 ORTHO05D005212 5.3e-36 156.0 107 71.0
Gohir.D02G026860 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.9e-33 147.5 201 44.3
Os05g0490500 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 2.4e-33 147.1 231 42.0
Oeu008667.1 Olea europaea HOM05D004482 ORTHO05D005212 3.3e-30 136.7 99 68.7
Oeu006194.1 Olea europaea HOM05D004482 ORTHO05D005212 4.0e-28 129.8 172 45.9
CBR_g30986 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-24 117.1 154 44.8
FAN16G2719 Fragaria x ananassa HOM05D004482 ORTHO05D005212 2.0e-19 100.9 117 49.6
CDE09G0489 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 1.4e-17 94.7 125 44.8
TWI09G0568 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 1.3e-15 88.2 110 46.4
MCO09G655 Micromonas commoda HOM05D004482 ORTHO05D005212 1.9e-14 84.3 292 28.8
VMungo0251G0179 Vigna mungo HOM05D004482 ORTHO05D005212 5.7e-14 82.8 111 47.7
BcaB01g01629 Brassica carinata HOM05D004482 ORTHO05D005212 3.7e-13 80.1 234 31.6
Zm00001eb291290 Zea mays HOM05D004482 ORTHO05D005212 2.2e-10 70.9 234 29.9
DCAR_012442 Daucus carota HOM05D004482 ORTHO05D005212 1.9e-09 67.8 106 41.5
EL10Ac4g09026 Beta vulgaris HOM05D004482 ORTHO05D005212 2.5e-09 67.4 87 44.8
Cpa.g.sc173.8 Carica papaya HOM05D004482 ORTHO05D005212 4.2e-09 66.6 56 64.3
Actinidia39240 Actinidia chinensis HOM05D000280 ORTHO05D000632 9.3e-09 65.5 59 62.7


User provided reference genes

Program Settings