Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 1.4e-179 632.9 323 100.0
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 6.3e-108 394.8 330 66.1
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 1.9e-96 356.7 323 61.6
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 2.3e-89 333.2 373 53.4
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 2.6e-85 319.7 328 56.4
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 3.7e-84 315.8 323 56.3
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 1.1e-80 304.3 330 53.9
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 3.6e-79 299.3 327 53.5
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.4e-78 297.4 346 52.9
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 8.9e-78 294.7 328 51.5
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 8.9e-78 294.7 323 52.9
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 1.2e-77 294.3 336 53.6
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 5.7e-77 292.0 324 53.4
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 1.4e-75 287.3 328 51.8
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 4.1e-75 285.8 329 51.7
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.7e-74 283.1 308 52.6
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 6.0e-74 282.0 326 50.3
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 5.0e-73 278.9 239 62.3
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.5e-72 277.3 330 50.6
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.9e-72 276.9 325 48.6
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 7.3e-72 275.0 382 46.3
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 9.5e-72 274.6 332 49.1
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 9.5e-72 274.6 330 50.0
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 6.2e-71 271.9 330 49.1
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 1.1e-70 271.2 329 48.6
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 5.2e-70 268.9 325 48.3
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 8.9e-70 268.1 325 48.6
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.0e-69 266.9 331 47.1
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 3.4e-69 266.2 359 43.2
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 4.4e-69 265.8 333 47.7
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 2.2e-68 263.5 324 47.5
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 2.9e-68 263.1 333 46.2
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 1.1e-67 261.2 330 46.7
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 4.1e-67 259.2 329 46.2
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 7.0e-67 258.5 288 51.7
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.6e-66 257.3 323 45.8
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 7.8e-66 255.0 326 44.5
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.7e-65 253.8 329 48.0
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 6.6e-65 251.9 325 47.1
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.9e-64 250.4 327 45.9
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.9e-64 250.4 390 43.1
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 2.5e-64 250.0 322 47.8
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 5.6e-64 248.8 323 47.1
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 9.5e-64 248.1 324 46.0
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 2.8e-63 246.5 258 53.9
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 3.6e-63 246.1 326 44.5
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 4.7e-63 245.7 326 45.4
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.8e-62 243.8 327 45.3
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 4.0e-62 242.7 326 44.8
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 5.2e-62 242.3 325 44.6
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.5e-61 240.7 325 44.0
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 5.8e-61 238.8 331 43.5
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 9.9e-61 238.0 330 44.8
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 9.9e-61 238.0 331 46.5
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.3e-60 237.7 339 44.2
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 1.3e-60 237.7 340 43.8
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 1.3e-60 237.7 328 46.6
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 3.2e-59 233.0 323 44.0
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 1.3e-57 227.6 323 42.4
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 8.6e-57 224.9 321 42.4
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.1e-56 224.6 321 42.4
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 1.5e-56 224.2 289 47.8
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 4.7e-55 219.2 332 42.5
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 2.4e-54 216.9 302 43.7
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 2.4e-54 216.9 286 46.5
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 1.5e-53 214.2 329 43.2
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 3.4e-53 213.0 334 40.7
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 7.6e-53 211.8 326 41.4
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.7e-52 210.7 327 41.3
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 3.8e-52 209.5 328 41.2
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 3.8e-52 209.5 259 49.8
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 6.4e-52 208.8 322 41.6
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.4e-52 208.4 292 44.2
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 3.5e-50 203.0 296 42.6
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 4.6e-50 202.6 335 43.0
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 1.0e-49 201.4 261 47.1
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 3.0e-49 199.9 325 39.7
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 1.9e-48 197.2 212 49.5
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 4.3e-48 196.1 272 47.4
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 5.6e-48 195.7 228 49.1
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 6.2e-47 192.2 319 39.2
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.8e-46 190.7 281 43.4
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.5e-45 187.6 294 41.8
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 4.9e-44 182.6 321 38.0
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 4.9e-44 182.6 370 34.9
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.4e-43 180.3 292 40.4
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 2.7e-42 176.8 176 54.5
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 2.3e-41 173.7 181 53.0
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 3.9e-41 172.9 270 40.7
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 8.1e-39 165.2 323 36.2
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 1.5e-37 161.0 327 36.4
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 8.1e-31 138.7 109 65.1
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.1e-30 138.3 177 44.6
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 4.0e-30 136.3 90 72.2
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 7.1e-27 125.6 266 36.1
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.9e-26 122.1 85 65.9
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 6.2e-23 112.5 347 28.0
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.4e-21 106.7 160 43.1
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 9.7e-16 88.6 91 54.9
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.6e-15 87.8 75 58.7
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 5.3e-14 82.8 344 26.2
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.0e-12 78.6 405 23.5
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.2e-12 77.4 121 41.3
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.1e-11 75.1 66 62.1
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 5.5e-11 72.8 65 55.4
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 5.5e-11 72.8 398 22.6
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 7.2e-11 72.4 406 22.4
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 7.2e-11 72.4 67 55.2
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.2e-10 71.6 47 72.3
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 2.7e-10 70.5 41 82.9
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 1.4e-09 68.2 75 49.3
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 2.2e-07 60.8 45 62.2
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 4.1e-06 56.6 64 45.3


User provided reference genes

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