Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 9.0e-131 470.3 247 100.0
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 6.7e-126 454.1 247 96.8
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 1.6e-66 256.9 220 65.0
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 2.1e-63 246.5 218 59.2
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 8.1e-63 244.6 218 58.7
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 5.2e-62 241.9 249 55.4
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.7e-60 236.9 228 56.1
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 1.1e-59 234.2 235 57.4
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.6e-58 230.3 233 54.1
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 2.7e-58 229.6 254 52.0
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 7.8e-58 228.0 260 51.2
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.0e-57 227.6 258 51.2
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 4.3e-56 222.2 239 52.7
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 8.1e-55 218.0 233 52.8
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 2.3e-54 216.5 213 55.4
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 2.3e-54 216.5 242 51.2
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 5.2e-54 215.3 254 51.2
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 5.2e-54 215.3 260 49.6
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 8.9e-54 214.5 254 51.6
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.5e-53 213.8 244 52.9
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 2.0e-53 213.4 198 58.6
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 4.4e-53 212.2 203 55.2
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 7.6e-53 211.5 220 50.9
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 9.9e-53 211.1 288 47.2
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 1.3e-52 210.7 252 49.2
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 2.2e-52 209.9 258 49.2
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 3.7e-52 209.1 241 49.0
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 8.4e-52 208.0 258 49.2
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 8.4e-52 208.0 259 48.6
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 2.4e-51 206.5 221 52.0
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 4.1e-51 205.7 237 49.4
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 5.4e-51 205.3 211 52.6
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 7.1e-51 204.9 231 49.8
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.2e-50 204.1 249 49.8
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 2.1e-50 203.4 216 50.5
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 3.5e-50 202.6 256 47.7
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 3.5e-50 202.6 205 52.7
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 4.6e-50 202.2 212 50.9
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 7.8e-50 201.4 246 49.6
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 1.7e-49 200.3 250 46.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 2.3e-49 199.9 264 46.2
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.3e-49 199.9 237 48.1
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 6.6e-49 198.4 219 51.6
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 8.6e-49 198.0 209 51.2
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.1e-48 197.6 221 50.2
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 1.5e-48 197.2 246 50.4
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 1.5e-48 197.2 208 52.4
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.9e-48 196.8 218 50.5
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 4.3e-48 195.7 250 46.8
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 5.6e-48 195.3 215 49.8
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 7.3e-48 194.9 193 51.8
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 9.6e-48 194.5 220 50.5
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.2e-47 194.1 184 57.6
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.2e-47 194.1 208 51.0
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 1.6e-47 193.7 197 53.8
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 3.6e-47 192.6 206 50.5
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 6.2e-47 191.8 221 48.9
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 6.2e-47 191.8 239 47.7
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.1e-46 191.0 249 48.2
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.4e-46 190.7 250 47.2
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 3.1e-46 189.5 205 53.2
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.0e-46 189.1 296 42.9
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 8.9e-46 188.0 231 48.9
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 8.9e-46 188.0 216 51.4
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 2.0e-45 186.8 231 47.6
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 3.4e-45 186.0 190 55.3
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 4.4e-45 185.7 215 48.8
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.7e-44 183.7 245 41.6
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.9e-43 180.3 203 52.2
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 2.4e-43 179.9 145 62.8
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.4e-43 179.9 211 46.4
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.2e-42 177.6 255 45.5
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 2.1e-42 176.8 184 56.0
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 2.7e-42 176.4 158 57.6
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 3.5e-42 176.0 228 46.5
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 3.5e-42 176.0 251 45.8
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 7.8e-42 174.9 278 40.3
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 3.0e-41 172.9 227 47.6
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 3.0e-41 172.9 145 62.8
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 3.0e-41 172.9 145 62.8
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 5.6e-40 168.7 156 57.1
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 5.6e-40 168.7 191 49.7
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 2.1e-39 166.8 174 52.9
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 2.8e-39 166.4 190 52.6
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.8e-39 166.4 245 45.3
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 8.1e-39 164.9 188 49.5
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 8.1e-39 164.9 215 44.7
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 1.1e-38 164.5 169 53.8
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 1.4e-38 164.1 177 52.0
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 1.4e-38 164.1 177 52.0
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 1.8e-38 163.7 208 45.2
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 2.4e-38 163.3 177 52.0
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 2.4e-38 163.3 153 54.9
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 3.1e-38 162.9 189 51.3
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 4.0e-38 162.5 177 52.0
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 4.0e-38 162.5 134 59.0
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 6.9e-38 161.8 182 54.9
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 9.0e-38 161.4 201 44.8
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 9.0e-38 161.4 245 44.9
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 1.2e-37 161.0 186 51.1
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.0e-37 160.2 248 43.1
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 3.4e-37 159.5 186 48.9
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 3.4e-37 159.5 192 47.4
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 3.4e-37 159.5 236 44.1
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 3.4e-37 159.5 215 43.3
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 7.1e-35 151.8 185 47.6
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 2.7e-34 149.8 227 41.4
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 2.5e-32 143.3 206 40.8
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.0e-29 133.7 255 40.0
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 3.4e-29 132.9 127 50.4
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 2.2e-28 130.2 80 71.2
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 1.9e-27 127.1 140 50.0
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 4.2e-27 125.9 118 50.0
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 6.0e-26 122.1 144 52.1
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 7.9e-26 121.7 126 52.4
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 1.8e-25 120.6 186 40.9
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 3.9e-25 119.4 128 48.4
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 4.0e-22 109.4 89 59.6
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.0e-22 109.4 168 41.1
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.7e-20 104.0 100 53.0
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 2.7e-18 96.7 103 54.4
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 3.9e-17 92.8 114 47.4
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 3.9e-17 92.8 245 35.9
PSO675G1839 Papaver somniferum HOM05D000047 ORTHO05D000044 2.5e-08 63.5 70 54.3


User provided reference genes

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