Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 2.1e-170 602.4 349 100.0
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 2.1e-157 559.3 326 92.9
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 3.8e-151 538.5 314 92.4
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 6.7e-71 271.9 282 57.4
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-63 248.1 282 55.7
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 4.9e-58 229.2 264 52.3
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 2.7e-56 223.4 282 51.8
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 8.5e-50 201.8 301 48.2
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 1.9e-46 190.7 233 54.5
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 4.1e-44 183.0 308 42.9
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 1.2e-43 181.4 202 52.0
PSO447G0093 Papaver somniferum HOM05D004787 ORTHO05D304571 4.5e-43 179.5 122 80.3
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-42 176.4 221 54.8
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-41 174.5 242 50.4
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 1.9e-41 174.1 222 51.8
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 2.5e-41 173.7 295 45.1
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 1.8e-36 157.5 200 50.5
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 4.5e-35 152.9 200 49.5
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-34 149.8 161 57.1
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 5.5e-33 146.0 293 39.2
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 7.2e-33 145.6 298 38.6
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 7.2e-33 145.6 203 50.7
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 9.4e-33 145.2 161 55.9
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 3.6e-32 143.3 293 38.6
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 3.6e-32 143.3 126 62.7
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 3.6e-32 143.3 293 38.9
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 6.1e-32 142.5 275 39.6
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 8.0e-32 142.1 277 38.3
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 1.8e-31 141.0 277 39.7
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.3e-31 140.6 277 39.7
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 2.3e-31 140.6 128 60.2
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 2.3e-31 140.6 277 38.6
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 3.0e-31 140.2 277 40.4
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 5.2e-31 139.4 293 37.9
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 8.8e-31 138.7 276 37.7
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 1.1e-30 138.3 293 37.5
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 1.1e-30 138.3 300 37.7
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.5e-30 137.9 293 37.5
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 2.0e-30 137.5 293 37.9
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 2.6e-30 137.1 292 37.7
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 3.3e-30 136.7 277 38.6
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 3.3e-30 136.7 293 37.2
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 4.4e-30 136.3 298 37.6
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 9.7e-30 135.2 310 36.5
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.3e-29 134.8 277 38.6
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-29 134.8 297 37.7
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.7e-29 134.4 296 38.2
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 1.7e-29 134.4 297 37.4
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 1.7e-29 134.4 275 39.6
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 2.2e-29 134.0 298 36.6
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 2.2e-29 134.0 287 38.0
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 3.7e-29 133.3 298 36.6
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 4.8e-29 132.9 277 37.9
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 4.8e-29 132.9 297 37.4
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 8.2e-29 132.1 292 37.3
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 8.2e-29 132.1 277 37.9
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 8.2e-29 132.1 276 37.0
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 1.1e-28 131.7 276 37.0
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 1.8e-28 131.0 276 37.0
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.4e-28 130.6 297 36.7
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 2.4e-28 130.6 297 36.7
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 2.4e-28 130.6 277 37.9
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 3.1e-28 130.2 277 37.5
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 3.1e-28 130.2 184 48.4
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 3.1e-28 130.2 284 37.3
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 4.1e-28 129.8 277 36.8
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 5.3e-28 129.4 314 36.0
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 5.3e-28 129.4 284 37.3
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 9.1e-28 128.6 277 36.8
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 9.1e-28 128.6 286 36.4
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 9.1e-28 128.6 297 36.4
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 9.1e-28 128.6 293 36.5
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.2e-27 128.3 277 36.5
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 1.2e-27 128.3 276 37.3
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.2e-27 128.3 293 35.5
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 1.6e-27 127.9 277 37.5
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 2.0e-27 127.5 286 36.4
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 2.0e-27 127.5 273 36.3
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 2.6e-27 127.1 286 37.1
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 5.9e-27 125.9 294 35.7
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 7.7e-27 125.6 287 36.6
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 1.7e-26 124.4 287 36.6
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.2e-26 124.0 254 39.4
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.2e-26 124.0 254 39.0
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 2.9e-26 123.6 286 35.7
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 2.9e-26 123.6 277 36.1
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.9e-26 123.6 298 36.2
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 2.9e-26 123.6 298 35.6
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 6.5e-26 122.5 287 36.2
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 1.1e-25 121.7 273 36.3
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 1.9e-25 120.9 297 36.4
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 4.2e-25 119.8 288 35.1
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 5.5e-25 119.4 284 36.3
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 7.2e-25 119.0 284 35.6
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 1.6e-24 117.9 296 34.1
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.6e-24 117.9 284 35.6
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 4.7e-24 116.3 289 34.9
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 6.1e-24 115.9 309 34.0
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 6.1e-24 115.9 283 31.1
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 1.4e-23 114.8 302 33.8
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 3.0e-23 113.6 273 35.9
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 4.0e-23 113.2 272 34.9
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 5.2e-23 112.8 289 34.6
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 5.2e-23 112.8 298 33.9
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 6.7e-23 112.5 276 36.2
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 6.7e-23 112.5 266 35.7
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 2.6e-22 110.5 283 34.6
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 3.3e-22 110.2 238 38.7
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 4.4e-22 109.8 275 33.1
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 7.5e-22 109.0 269 34.6
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.7e-21 107.8 293 32.8
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.7e-21 107.8 313 32.9
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 3.7e-21 106.7 294 32.7
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.8e-21 106.3 288 32.6
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.8e-21 106.3 288 32.6
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 6.3e-21 105.9 277 31.8
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 6.3e-21 105.9 277 31.8
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.0e-19 100.9 220 36.4
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 2.7e-19 100.5 262 32.4
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.3e-18 98.2 155 46.5
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.2e-18 97.4 240 32.5
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.9e-18 97.1 216 36.6
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 5.0e-18 96.3 155 46.5
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 5.5e-17 92.8 177 40.7
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 9.4e-17 92.0 388 29.1
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.6e-16 91.3 290 29.7
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.6e-16 91.3 296 30.4
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 2.1e-16 90.9 287 30.0
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 2.7e-16 90.5 205 35.6
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 6.1e-16 89.4 364 29.1
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 3.1e-12 77.0 171 38.0
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 9.1e-12 75.5 155 38.1
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.2e-11 75.1 159 37.1
PSO339G2254 Papaver somniferum HOM05D004787 ORTHO05D305067 2.9e-10 70.5 42 88.1
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.1e-09 68.6 216 29.6
PSO170G1852 Papaver somniferum HOM05D004787 ORTHO05D302361 2.8e-08 63.9 81 48.1
PSO210G5779 Papaver somniferum HOM05D004787 ORTHO05D303704 2.8e-08 63.9 81 48.1
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 6.1e-08 62.8 126 37.3
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 8.0e-08 62.4 130 37.7
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 3.0e-07 60.5 121 38.0


User provided reference genes

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