Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2001 Papaver somniferum HOM05D001009 ORTHO05D000829 4.4e-101 371.3 189 100.0
PSO339G2987 Papaver somniferum HOM05D001009 ORTHO05D000829 3.3e-24 115.9 129 56.6
PSO339G3874 Papaver somniferum HOM05D001009 ORTHO05D000829 7.4e-24 114.8 127 56.7
PSO339G2517 Papaver somniferum HOM05D001009 ORTHO05D000829 1.3e-23 114.0 152 48.7
PSO339G1062 Papaver somniferum HOM05D001009 ORTHO05D000829 4.8e-23 112.1 193 43.5
PSO832G1535 Papaver somniferum HOM05D001009 ORTHO05D000829 4.0e-22 109.0 132 55.3
PSO339G0508 Papaver somniferum HOM05D001009 ORTHO05D000829 6.9e-22 108.2 132 54.5
PSO339G4232 Papaver somniferum HOM05D001009 ORTHO05D000829 6.9e-22 108.2 132 54.5
PSO675G1427 Papaver somniferum HOM05D001009 ORTHO05D000829 2.0e-21 106.7 136 52.9
PSO513G0100 Papaver somniferum HOM05D001009 ORTHO05D000829 2.6e-21 106.3 127 53.5
PSO675G7653 Papaver somniferum HOM05D001009 ORTHO05D000829 4.5e-21 105.5 136 52.9
PSO210G2336 Papaver somniferum HOM05D001009 ORTHO05D000829 1.3e-20 104.0 139 52.5
PSO675G9016 Papaver somniferum HOM05D001009 ORTHO05D000829 2.9e-20 102.8 131 53.4
PSO339G0997 Papaver somniferum HOM05D001009 ORTHO05D000829 3.0e-17 92.8 158 43.7
PSO339G1047 Papaver somniferum HOM05D001009 ORTHO05D000829 6.7e-17 91.7 130 50.0
PSO339G1455 Papaver somniferum HOM05D001009 ORTHO05D000829 3.3e-16 89.4 125 45.6
PSO339G4167 Papaver somniferum HOM05D001009 ORTHO05D000829 3.3e-16 89.4 145 44.1
PSO513G0054 Papaver somniferum HOM05D001009 ORTHO05D000829 3.3e-16 89.4 125 44.0
Hma1.2p1_0026F.1_g016350 Hydrangea macrophylla HOM05D001009 ORTHO05D000829 1.9e-11 73.6 128 40.6
Medtr5g080880 Medicago truncatula HOM05D001009 ORTHO05D000829 9.3e-11 71.2 81 45.7
Phvul.008G230400 Phaseolus vulgaris HOM05D001009 ORTHO05D000829 9.3e-11 71.2 79 46.8
QL08p061631 Quercus lobata HOM05D001009 ORTHO05D000829 9.3e-11 71.2 175 33.7
Atru.chr12.341 Acer truncatum HOM05D001009 ORTHO05D000829 1.6e-10 70.5 129 39.5
AUR62040690 Chenopodium quinoa HOM05D001009 ORTHO05D000829 2.1e-10 70.1 150 36.7
Psat2g038720 Pisum sativum HOM05D001009 ORTHO05D000829 2.1e-10 70.1 79 46.8
Nn2g11241 Nelumbo nucifera HOM05D001009 ORTHO05D000829 2.7e-10 69.7 127 38.6
QL08p061636 Quercus lobata HOM05D001009 ORTHO05D000829 2.7e-10 69.7 127 38.6
ECA232G3500 Erigeron canadensis HOM05D001009 ORTHO05D000829 3.5e-10 69.3 69 46.4
VMungo0647G0043 Vigna mungo HOM05D001009 ORTHO05D000829 3.5e-10 69.3 79 46.8
BcaC06g32313 Brassica carinata HOM05D001009 ORTHO05D000829 4.6e-10 68.9 70 45.7
C09p70800 Brassica napus HOM05D001009 ORTHO05D000829 4.6e-10 68.9 70 45.7
BolC9t59839H Brassica oleracea HOM05D001009 ORTHO05D000829 4.6e-10 68.9 70 45.7
Cpa.g.sc454.2 Carica papaya HOM05D001009 ORTHO05D000829 6.1e-10 68.6 173 32.4
LjContig00141g0011947 Lotus japonicus HOM05D001009 ORTHO05D000829 6.1e-10 68.6 78 47.4
Ca_05905_v3 Cicer arietinum L. HOM05D001009 ORTHO05D000829 7.9e-10 68.2 79 45.6
Glyma.02G251000 Glycine max HOM05D001009 ORTHO05D000829 7.9e-10 68.2 93 46.2
Hma1.2p1_2902F.1_g330050 Hydrangea macrophylla HOM05D001009 ORTHO05D000829 7.9e-10 68.2 128 39.1
MD07G1204400 Malus domestica HOM05D001009 ORTHO05D000829 7.9e-10 68.2 127 37.0
arahy.Tifrunner.gnm1.ann1.4F3MJE Arachis hypogaea HOM05D001009 ORTHO05D000829 1.0e-09 67.8 82 46.3
BcaC06g32309 Brassica carinata HOM05D001009 ORTHO05D000829 1.0e-09 67.8 70 45.7
PSO339G1059 Papaver somniferum HOM05D001009 ORTHO05D000829 1.0e-09 67.8 126 42.1
A10p30360 Brassica napus HOM05D001009 ORTHO05D000829 1.3e-09 67.4 77 41.6
BraA10t45075Z Brassica rapa HOM05D001009 ORTHO05D000829 1.3e-09 67.4 77 41.6
MD01G1140100 Malus domestica HOM05D001009 ORTHO05D000829 1.3e-09 67.4 127 39.4
Sp6g36890 Schrenkiella parvula HOM05D001009 ORTHO05D000829 1.3e-09 67.4 77 40.3
TPR.G25850 Trifolium pratense HOM05D001009 ORTHO05D000829 1.3e-09 67.4 79 48.1
BcaB01g05969 Brassica carinata HOM05D001009 ORTHO05D000829 1.8e-09 67.0 77 40.3
Ciclev10032528m.g Citrus clementina HOM05D001009 ORTHO05D000829 1.8e-09 67.0 126 38.9
Gohir.A10G223300 Gossypium hirsutum HOM05D001009 ORTHO05D000829 1.8e-09 67.0 198 31.8
GSVIVG01016468001 Vitis vinifera HOM05D001009 ORTHO05D000829 1.8e-09 67.0 126 39.7
Duzib106G0916 Durio zibethinus HOM05D001009 ORTHO05D000829 2.3e-09 66.6 127 39.4
MD12G1094400 Malus domestica HOM05D001009 ORTHO05D000829 2.3e-09 66.6 127 37.0
arahy.Tifrunner.gnm1.ann1.U1AIJ2 Arachis hypogaea HOM05D001009 ORTHO05D000829 3.0e-09 66.2 95 42.1
Gorai.011G269600 Gossypium raimondii HOM05D001009 ORTHO05D000829 3.0e-09 66.2 198 31.3
SGA_v2.0_scaffold2G00985 Striga asiatica HOM05D001009 ORTHO05D000829 3.0e-09 66.2 192 32.3
arahy.Tifrunner.gnm1.ann1.FFR9P9 Arachis hypogaea HOM05D001009 ORTHO05D000829 3.9e-09 65.9 97 41.2
Nitab4.5_0006374g0010 Nicotiana tabacum HOM05D001009 ORTHO05D000829 3.9e-09 65.9 128 35.9
Solyc03g079930.3 Solanum lycopersicum HOM05D001009 ORTHO05D000829 3.9e-09 65.9 129 38.0
Sopen03g027200 Solanum pennellii HOM05D001009 ORTHO05D000829 3.9e-09 65.9 129 38.0
MSTRG.263 Avicennia marina HOM05D001009 ORTHO05D000829 5.1e-09 65.5 94 40.4
A03p02510 Brassica napus HOM05D001009 ORTHO05D000829 5.1e-09 65.5 98 34.7
BraA03t09612Z Brassica rapa HOM05D001009 ORTHO05D000829 5.1e-09 65.5 98 34.7
COL.COLO4_25520 Corchorus olitorius HOM05D001009 ORTHO05D000829 5.1e-09 65.5 128 40.6
PSO104G0150 Papaver somniferum HOM05D001009 ORTHO05D000829 5.1e-09 65.5 128 39.1
CANSAT56G1474 Cannabis sativa HOM05D001009 ORTHO05D000829 6.7e-09 65.1 127 37.8
Cfa001417 Carpinus fangiana HOM05D001009 ORTHO05D000829 6.7e-09 65.1 184 32.6
Thhalv10014433m.g Eutrema salsugineum HOM05D001009 ORTHO05D000829 6.7e-09 65.1 76 39.5
Gohir.D04G064900 Gossypium hirsutum HOM05D001009 ORTHO05D000829 6.7e-09 65.1 127 37.8
Gorai.012G073000 Gossypium raimondii HOM05D001009 ORTHO05D000829 6.7e-09 65.1 127 37.8
Nitab4.5_0000779g0060 Nicotiana tabacum HOM05D001009 ORTHO05D000829 6.7e-09 65.1 130 39.2
PGSC0003DMG400021701 Solanum tuberosum HOM05D001009 ORTHO05D000829 6.7e-09 65.1 89 43.8
Thecc.10G034700 Theobroma cacao HOM05D001009 ORTHO05D000829 6.7e-09 65.1 127 38.6
Glyma.14G065700 Glycine max HOM05D001009 ORTHO05D000829 8.7e-09 64.7 119 36.1
Nitab4.5_0004474g0020 Nicotiana tabacum HOM05D001009 ORTHO05D000829 8.7e-09 64.7 130 37.7
arahy.Tifrunner.gnm1.ann1.H18GF1 Arachis hypogaea HOM05D001009 ORTHO05D000829 1.1e-08 64.3 144 35.4
arahy.Tifrunner.gnm1.ann1.W9PXM2 Arachis hypogaea HOM05D001009 ORTHO05D000829 1.1e-08 64.3 144 35.4
Gohir.A05G347400 Gossypium hirsutum HOM05D001009 ORTHO05D000829 1.1e-08 64.3 128 39.8
HanXRQChr09g0247071 Helianthus annuus HOM05D001009 ORTHO05D000829 1.1e-08 64.3 67 44.8
MBI05_g02642_MAGBIO Magnolia biondii HOM05D001009 ORTHO05D000829 1.1e-08 64.3 127 40.2
arahy.Tifrunner.gnm1.ann1.B3W4AW Arachis hypogaea HOM05D001009 ORTHO05D000829 1.5e-08 63.9 95 41.1
Ciclev10012447m.g Citrus clementina HOM05D001009 ORTHO05D000829 1.5e-08 63.9 123 40.7
QL08p061640 Quercus lobata HOM05D001009 ORTHO05D000829 1.5e-08 63.9 144 32.6
CARHR207220 Cardamine hirsuta HOM05D001009 ORTHO05D000829 1.9e-08 63.5 65 44.6
Gohir.D10G235808 Gossypium hirsutum HOM05D001009 ORTHO05D000829 1.9e-08 63.5 198 30.8
Lalb_Chr17g0346401 Lupinus albus HOM05D001009 ORTHO05D000829 1.9e-08 63.5 117 35.9
Duzib114G0353 Durio zibethinus HOM05D001009 ORTHO05D000829 2.5e-08 63.2 127 35.4
Lalb_Chr19g0125151 Lupinus albus HOM05D001009 ORTHO05D000829 2.5e-08 63.2 78 46.2
PGR142G2699 Punica granatum HOM05D001009 ORTHO05D000829 2.5e-08 63.2 126 38.1
AL6G15950 Arabidopsis lyrata HOM05D001009 ORTHO05D000829 3.3e-08 62.8 65 44.6
HanXRQChr15g0496451 Helianthus annuus HOM05D001009 ORTHO05D000829 3.3e-08 62.8 94 40.4
Aqoxy1G00831 Aquilegia oxysepala HOM05D001009 ORTHO05D000829 4.3e-08 62.4 125 36.8
AT5G05990 Arabidopsis thaliana HOM05D001009 ORTHO05D000829 4.3e-08 62.4 65 44.6
CiPaw.01G292100 Carya illinoinensis HOM05D001009 ORTHO05D000829 4.3e-08 62.4 167 34.7
PSO339G6202 Papaver somniferum HOM05D001009 ORTHO05D000829 4.3e-08 62.4 177 33.9
PSO407G0106 Papaver somniferum HOM05D001009 ORTHO05D000829 4.3e-08 62.4 127 39.4
Potri.006G090700 Populus trichocarpa HOM05D001009 ORTHO05D000829 4.3e-08 62.4 151 34.4
Sabra06G0068500 Salix brachista HOM05D001009 ORTHO05D000829 4.3e-08 62.4 123 33.3
MSTRG.8284 Avicennia marina HOM05D001009 ORTHO05D000829 5.7e-08 62.0 115 34.8
CSS0002250 Camellia sinensis var. sinensis HOM05D001009 ORTHO05D000829 7.4e-08 61.6 170 30.6
CSS0049537 Camellia sinensis var. sinensis HOM05D001009 ORTHO05D000829 7.4e-08 61.6 128 36.7
ClCG10G021440 Citrullus lanatus HOM05D001009 ORTHO05D000829 7.4e-08 61.6 125 38.4
PSO421G0167 Papaver somniferum HOM05D001009 ORTHO05D302332 7.4e-08 61.6 129 34.1
PSO601G0028 Papaver somniferum HOM05D001009 ORTHO05D000829 7.4e-08 61.6 128 36.7
Prupe.2G240700 Prunus persica HOM05D001009 ORTHO05D000829 7.4e-08 61.6 181 32.0
Aa31LG11G7040 Aethionema arabicum HOM05D001009 ORTHO05D000829 9.7e-08 61.2 65 46.2
FvH4_7g23410 Fragaria vesca HOM05D001009 ORTHO05D000829 9.7e-08 61.2 174 29.9
FAN03G2210 Fragaria x ananassa HOM05D001009 ORTHO05D000829 9.7e-08 61.2 174 30.5
Lsat_1_v5_gn_9_63501 Lactuca sativa HOM05D001009 ORTHO05D000829 9.7e-08 61.2 131 33.6
TAR636G1456 Trochodendron aralioides HOM05D001009 ORTHO05D000829 9.7e-08 61.2 127 38.6
PSO170G3526 Papaver somniferum HOM05D001009 ORTHO05D000829 1.3e-07 60.8 128 39.1
TAR636G2594 Trochodendron aralioides HOM05D001009 ORTHO05D000829 1.3e-07 60.8 127 37.8
CARHR165660 Cardamine hirsuta HOM05D001009 ORTHO05D000829 1.6e-07 60.5 68 45.6
Nitab4.5_0000987g0110 Nicotiana tabacum HOM05D001009 ORTHO05D000829 1.6e-07 60.5 128 34.4
FAN06G0325 Fragaria x ananassa HOM05D001009 ORTHO05D000829 2.2e-07 60.1 174 29.9
Oeu059732.1 Olea europaea HOM05D001009 ORTHO05D000829 2.2e-07 60.1 126 35.7
PSO063G2278 Papaver somniferum HOM05D001009 ORTHO05D000829 2.2e-07 60.1 128 36.7
PSO063G6291 Papaver somniferum HOM05D001009 ORTHO05D000829 2.2e-07 60.1 128 35.9
PSO063G6770 Papaver somniferum HOM05D001009 ORTHO05D000829 2.2e-07 60.1 128 36.7
Atru.chr2.339 Acer truncatum HOM05D001009 ORTHO05D000829 2.8e-07 59.7 124 36.3
PSO339G6405 Papaver somniferum HOM05D001009 ORTHO05D000829 2.8e-07 59.7 127 37.0
Atru.chr8.2062 Acer truncatum HOM05D001009 ORTHO05D000829 3.7e-07 59.3 124 36.3
AUR62012145 Chenopodium quinoa HOM05D001009 ORTHO05D000829 3.7e-07 59.3 126 34.1
TPR.G38424 Trifolium pratense HOM05D001009 ORTHO05D000829 3.7e-07 59.3 107 38.3
Carub.0006s0489 Capsella rubella HOM05D001009 ORTHO05D000829 4.8e-07 58.9 105 34.3
PSO170G6286 Papaver somniferum HOM05D001009 ORTHO05D000829 4.8e-07 58.9 128 38.3
A05p06610 Brassica napus HOM05D001009 ORTHO05D000829 6.3e-07 58.5 94 40.4
BraA05t19628Z Brassica rapa HOM05D001009 ORTHO05D000829 6.3e-07 58.5 94 40.4
Cc02_g07350 Coffea canephora HOM05D001009 ORTHO05D000829 6.3e-07 58.5 130 32.3
Eucgr.G02989 Eucalyptus grandis HOM05D001009 ORTHO05D000829 6.3e-07 58.5 126 36.5
FAN06G3918 Fragaria x ananassa HOM05D001009 ORTHO05D000829 6.3e-07 58.5 174 29.3
PSO601G0021 Papaver somniferum HOM05D001009 ORTHO05D000829 6.3e-07 58.5 128 35.2
QL07p028800 Quercus lobata HOM05D001009 ORTHO05D000829 6.3e-07 58.5 187 28.9
C09p74430 Brassica napus HOM05D000031 ORTHO05D001864 8.2e-07 58.2 88 39.8
Dinv34469 Davidia involucrata HOM05D001009 ORTHO05D000829 8.2e-07 58.2 99 38.4
PSO017G0804 Papaver somniferum HOM05D001009 ORTHO05D000829 8.2e-07 58.2 125 36.0
RcHm_v2.0_Chr1g0368531 Rosa chinensis HOM05D001009 ORTHO05D000829 8.2e-07 58.2 172 30.8
THA.LOC104816579 Tarenaya hassleriana HOM05D001009 ORTHO05D000829 8.2e-07 58.2 126 34.9
TWI63G0148 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 8.2e-07 58.2 183 30.1
Thhalv10017139m.g Eutrema salsugineum HOM05D001009 ORTHO05D000829 1.4e-06 57.4 67 41.8
Manes.09G096200 Manihot esculenta HOM05D001009 ORTHO05D000829 1.4e-06 57.4 126 35.7
PSO541G4537 Papaver somniferum HOM05D001009 ORTHO05D000829 1.4e-06 57.4 131 33.6
TWI15G0684 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 1.4e-06 57.4 181 32.6
Actinidia02375 Actinidia chinensis HOM05D001009 ORTHO05D000829 1.8e-06 57.0 126 32.5
BcaNung04456 Brassica carinata HOM05D001009 ORTHO05D000829 1.8e-06 57.0 87 40.2
C03p02850 Brassica napus HOM05D001009 ORTHO05D000829 1.8e-06 57.0 70 38.6
BolC3t12840H Brassica oleracea HOM05D001009 ORTHO05D000829 1.8e-06 57.0 70 38.6
BolC9t60174H Brassica oleracea HOM05D000031 ORTHO05D001864 1.8e-06 57.0 87 40.2
CAN.G774.39 Capsicum annuum HOM05D001009 ORTHO05D000829 1.8e-06 57.0 186 30.6
CAN.G774.44 Capsicum annuum HOM05D001009 ORTHO05D000829 1.8e-06 57.0 186 30.6
FAN10G4249 Fragaria x ananassa HOM05D001009 ORTHO05D000829 1.8e-06 57.0 172 29.7
vmacro10213 Vaccinium macrocarpon HOM05D001009 ORTHO05D000829 1.8e-06 57.0 125 35.2
Lj1g0004447 Lotus japonicus HOM05D001009 ORTHO05D000829 2.4e-06 56.6 187 29.4
Lalb_Chr03g0042541 Lupinus albus HOM05D001009 ORTHO05D000829 2.4e-06 56.6 101 35.6
Rhsim09G0168700 Rhododendron simsii HOM05D001009 ORTHO05D000829 2.4e-06 56.6 126 35.7
Thhalv10010645m.g Eutrema salsugineum HOM05D001009 ORTHO05D000829 3.1e-06 56.2 68 41.2
PSO104G0239 Papaver somniferum HOM05D001009 ORTHO05D000829 3.1e-06 56.2 40 60.0
Sp4g22070 Schrenkiella parvula HOM05D001009 ORTHO05D000829 3.1e-06 56.2 67 43.3
CARHR134670 Cardamine hirsuta HOM05D001009 ORTHO05D000829 4.1e-06 55.8 72 37.5
MD00G1141400 Malus domestica HOM05D001009 ORTHO05D000829 4.1e-06 55.8 92 37.0
Peaxi162Scf00611g00321 Petunia axillaris HOM05D001009 ORTHO05D000829 4.1e-06 55.8 184 29.3
TAR381G0448 Trochodendron aralioides HOM05D001009 ORTHO05D000829 4.1e-06 55.8 96 36.5
AT3G55605 Arabidopsis thaliana HOM05D001009 ORTHO05D000829 5.3e-06 55.5 96 37.5
A10p33520 Brassica napus HOM05D000031 ORTHO05D001864 5.3e-06 55.5 88 38.6
BraA10t45382Z Brassica rapa HOM05D000031 ORTHO05D001864 5.3e-06 55.5 88 38.6
CANSAT35G1073 Cannabis sativa HOM05D001009 ORTHO05D000829 5.3e-06 55.5 126 32.5
CiPaw.09G199200 Carya illinoinensis HOM05D001009 ORTHO05D000829 5.3e-06 55.5 132 36.4
DCAR_027590 Daucus carota HOM05D001009 ORTHO05D000829 5.3e-06 55.5 98 36.7
MD12G1150500 Malus domestica HOM05D001009 ORTHO05D000829 5.3e-06 55.5 190 27.4
Medtr5g080870 Medicago truncatula HOM05D001009 ORTHO05D000829 5.3e-06 55.5 87 36.8
SalBow6G2327 Salvia bowleyana HOM05D001009 ORTHO05D000829 5.3e-06 55.5 70 40.0
SalBow6G5081 Salvia bowleyana HOM05D001009 ORTHO05D000829 5.3e-06 55.5 70 40.0
Ah.16g102680 Amaranthus hybridus HOM05D002357 ORTHO05D002676 6.9e-06 55.1 106 36.8
AL4G37330 Arabidopsis lyrata HOM05D001009 ORTHO05D000829 6.9e-06 55.1 67 41.8
EL10Ac2g04692 Beta vulgaris HOM05D001009 ORTHO05D000829 6.9e-06 55.1 117 36.8
BcaB02g09088 Brassica carinata HOM05D001009 ORTHO05D000829 6.9e-06 55.1 110 38.2
C04p07720 Brassica napus HOM05D001009 ORTHO05D000829 6.9e-06 55.1 139 31.7
BolC4t22388H Brassica oleracea HOM05D001009 ORTHO05D000829 6.9e-06 55.1 139 31.7
Carub.0005s2235 Capsella rubella HOM05D001009 ORTHO05D000829 6.9e-06 55.1 95 35.8
MBI01_g22963_MAGBIO Magnolia biondii HOM05D001009 ORTHO05D000829 6.9e-06 55.1 67 40.3
PSO339G4680 Papaver somniferum HOM05D001009 ORTHO05D000829 6.9e-06 55.1 122 36.1
Potri.010G198600 Populus trichocarpa HOM05D001009 ORTHO05D000829 6.9e-06 55.1 197 28.9
Ah.10g037100 Amaranthus hybridus HOM05D001009 ORTHO05D000829 9.0e-06 54.7 95 36.8
AL772U10020 Arabidopsis lyrata HOM05D001009 ORTHO05D000829 9.0e-06 54.7 67 41.8
CAN.G115.3 Capsicum annuum HOM05D001009 ORTHO05D000829 9.0e-06 54.7 90 40.0
Dinv35558 Davidia involucrata HOM05D001009 ORTHO05D000829 9.0e-06 54.7 70 37.1


User provided reference genes

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