Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1940 Papaver somniferum HOM05D004274 ORTHO05D004980 5.9e-118 427.6 217 100.0
PSO384G1823 Papaver somniferum HOM05D004274 ORTHO05D004980 2.8e-104 382.1 219 90.9
Glyma.18G049100 Glycine max HOM05D004274 ORTHO05D004980 2.8e-67 259.2 153 81.7
Lalb_Chr15g0085561 Lupinus albus HOM05D004274 ORTHO05D004980 1.8e-66 256.5 198 68.7
CANSAT54G0105 Cannabis sativa HOM05D004274 ORTHO05D004980 5.2e-66 255.0 153 78.4
Peaxi162Scf00293g00719 Petunia axillaris HOM05D004274 ORTHO05D004980 5.2e-66 255.0 155 80.6
PGSC0003DMG400015127 Solanum tuberosum HOM05D004274 ORTHO05D004980 1.5e-65 253.4 155 79.4
Nitab4.5_0000539g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 2.0e-65 253.1 190 69.5
Nitab4.5_0002399g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 2.6e-65 252.7 191 69.1
Hma1.2p1_0161F.1_g071960 Hydrangea macrophylla HOM05D004274 ORTHO05D004980 4.4e-65 251.9 175 73.1
ECA247G3741 Erigeron canadensis HOM05D004274 ORTHO05D004980 5.8e-65 251.5 185 71.9
arahy.Tifrunner.gnm1.ann1.P847CR Arachis hypogaea HOM05D004274 ORTHO05D004980 9.9e-65 250.8 203 65.0
arahy.Tifrunner.gnm1.ann1.URW4K1 Arachis hypogaea HOM05D004274 ORTHO05D004980 9.9e-65 250.8 203 65.5
Lsat_1_v5_gn_9_15480 Lactuca sativa HOM05D004274 ORTHO05D004980 1.7e-64 250.0 154 79.2
TPR.G13822 Trifolium pratense HOM05D004274 ORTHO05D004980 2.9e-64 249.2 202 66.8
Duzib168G2323 Durio zibethinus HOM05D004274 ORTHO05D004980 3.8e-64 248.8 149 81.2
THA.LOC104823773 Tarenaya hassleriana HOM05D004274 ORTHO05D004980 6.4e-64 248.1 151 80.1
VMungo0540G0713 Vigna mungo HOM05D004274 ORTHO05D004980 1.4e-63 246.9 209 64.6
PGR083G2809 Punica granatum HOM05D004274 ORTHO05D004980 1.9e-63 246.5 154 78.6
Manes.02G210080 Manihot esculenta HOM05D004274 ORTHO05D004980 2.4e-63 246.1 178 70.8
AT5G58240 Arabidopsis thaliana HOM05D004274 ORTHO05D004980 1.2e-62 243.8 158 76.6
BcaB01g04543 Brassica carinata HOM05D004274 ORTHO05D004980 1.6e-62 243.4 158 74.1
Lj2C1107G8 Lonicera japonica HOM05D004274 ORTHO05D004980 1.6e-62 243.4 162 75.3
C09p50090 Brassica napus HOM05D004274 ORTHO05D004980 2.1e-62 243.0 183 67.2
BolC9t57861H Brassica oleracea HOM05D004274 ORTHO05D004980 2.1e-62 243.0 183 67.2
Oeu023904.1 Olea europaea HOM05D004274 ORTHO05D004980 3.5e-62 242.3 176 68.8
Gohir.D10G148100 Gossypium hirsutum HOM05D004274 ORTHO05D004980 4.6e-62 241.9 153 78.4
Thecc.09G366500 Theobroma cacao HOM05D004274 ORTHO05D004980 6.0e-62 241.5 215 61.4
BraA10t43627Z Brassica rapa HOM05D004274 ORTHO05D004980 7.8e-62 241.1 215 60.9
Thhalv10014808m.g Eutrema salsugineum HOM05D004274 ORTHO05D004980 1.3e-61 240.4 156 74.4
FAN16G2313 Fragaria x ananassa HOM05D004274 ORTHO05D004980 1.3e-61 240.4 167 73.1
Gohir.A10G118575 Gossypium hirsutum HOM05D004274 ORTHO05D004980 1.3e-61 240.4 153 77.8
Medtr3g062940 Medicago truncatula HOM05D004274 ORTHO05D004980 1.3e-61 240.4 183 71.0
BcaC04g19900 Brassica carinata HOM05D004274 ORTHO05D004980 1.7e-61 240.0 156 73.7
Ca_15091_v3 Cicer arietinum L. HOM05D004274 ORTHO05D004980 2.3e-61 239.6 182 69.2
A10p15980 Brassica napus HOM05D004274 ORTHO05D004980 3.9e-61 238.8 152 75.0
HanXRQChr13g0391791 Helianthus annuus HOM05D004274 ORTHO05D004980 5.1e-61 238.4 190 66.3
PSO339G1462 Papaver somniferum HOM05D004274 ORTHO05D004980 5.1e-61 238.4 161 73.3
FAN21G2911 Fragaria x ananassa HOM05D004274 ORTHO05D004980 6.6e-61 238.0 157 76.4
Sp6g19900 Schrenkiella parvula HOM05D004274 ORTHO05D004980 1.1e-60 237.3 150 76.7
Cc01_g15600 Coffea canephora HOM05D004274 ORTHO05D004980 5.6e-60 235.0 205 63.4
Os11g0120600 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 5.6e-60 235.0 156 73.7
Carub.0008s1878 Capsella rubella HOM05D004274 ORTHO05D004980 9.6e-60 234.2 152 76.3
AUR62017620 Chenopodium quinoa HOM05D004274 ORTHO05D004980 1.2e-59 233.8 168 70.8
Migut.N00703 Erythranthe guttata HOM05D004274 ORTHO05D004980 1.6e-59 233.4 165 72.1
Rhsim01G0245500 Rhododendron simsii HOM05D004274 ORTHO05D004980 1.6e-59 233.4 226 58.0
AL8G34340 Arabidopsis lyrata HOM05D004274 ORTHO05D004980 2.1e-59 233.0 169 70.4
GSVIVG01024520001 Vitis vinifera HOM05D004274 ORTHO05D004980 3.6e-59 232.3 177 68.4
Oeu020453.2 Olea europaea HOM05D004274 ORTHO05D004980 8.1e-59 231.1 171 67.8
SEGI_00344 Sequoiadendron giganteum HOM05D004274 ORTHO05D004980 8.1e-59 231.1 157 70.7
Lj6g0024729 Lotus japonicus HOM05D004274 ORTHO05D004980 1.2e-57 227.3 153 74.5
AUR62015168 Chenopodium quinoa HOM05D004274 ORTHO05D004980 2.6e-57 226.1 171 68.4
MBI03_g31633_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 9.9e-57 224.2 206 60.7
CANSAT54G0115 Cannabis sativa HOM05D004274 ORTHO05D004980 1.7e-56 223.4 159 67.9
CiPaw.13G059500 Carya illinoinensis HOM05D004274 ORTHO05D004980 2.2e-56 223.0 189 64.0
Haze_24498 Corylus avellana HOM05D004274 ORTHO05D004980 2.9e-56 222.6 174 66.1
Eucgr.D01050 Eucalyptus grandis HOM05D004274 ORTHO05D004980 3.8e-56 222.2 157 73.2
Sed0016747 Sechium edule HOM05D004274 ORTHO05D004980 6.4e-56 221.5 194 61.3
Sed0009740 Sechium edule HOM05D004274 ORTHO05D004980 8.4e-56 221.1 176 67.6
Aa31LG11G30 Aethionema arabicum HOM05D004274 ORTHO05D004980 1.4e-55 220.3 177 65.5
Ciclev10006852m.g Citrus clementina HOM05D004274 ORTHO05D004980 2.4e-55 219.5 202 58.4
Psat5g146360 Pisum sativum HOM05D004274 ORTHO05D004980 3.2e-55 219.2 199 59.8
Ah.01g002020 Amaranthus hybridus HOM05D004274 ORTHO05D004980 7.8e-54 214.5 180 63.3
CSS0034718 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 7.8e-54 214.5 155 71.0
Gorai.011G165300 Gossypium raimondii HOM05D004274 ORTHO05D004980 1.3e-53 213.8 153 72.5
Cpa.g.sc84.38 Carica papaya HOM05D004274 ORTHO05D004980 3.9e-53 212.2 155 68.4
Psat5g146320 Pisum sativum HOM05D004274 ORTHO05D004980 7.3e-52 208.0 157 66.2
SalBow2G3254 Salvia bowleyana HOM05D004274 ORTHO05D004980 1.6e-51 206.8 155 69.0
Sc04g0008110 Simmondsia chinensis HOM05D004274 ORTHO05D004980 2.1e-51 206.5 154 63.6
ClCG10G003560 Citrullus lanatus HOM05D004274 ORTHO05D004980 2.8e-51 206.1 158 64.6
Aqoxy2G00658 Aquilegia oxysepala HOM05D004274 ORTHO05D004980 2.4e-50 203.0 200 59.0
Zm00001eb265500 Zea mays HOM05D004274 ORTHO05D004980 6.9e-50 201.4 180 61.1
TPR.G37420 Trifolium pratense HOM05D004274 ORTHO05D004980 1.5e-49 200.3 168 61.9
FAN11G1599 Fragaria x ananassa HOM05D004274 ORTHO05D004980 2.0e-49 199.9 154 69.5
Ciclev10006524m.g Citrus clementina HOM05D004274 ORTHO05D004980 2.6e-49 199.5 153 67.3
Lsat_1_v5_gn_8_98760 Lactuca sativa HOM05D004274 ORTHO05D004980 4.5e-49 198.7 153 64.1
CBR_g39157 Chara braunii HOM05D004274 ORTHO05D004980 9.9e-49 197.6 154 62.3
CsaV3_3G000810 Cucumis sativus L. HOM05D004274 ORTHO05D004980 9.9e-49 197.6 202 55.4
CAN.G3.27 Capsicum annuum HOM05D004274 ORTHO05D004980 1.3e-48 197.2 119 79.0
Medtr3g063030 Medicago truncatula HOM05D004274 ORTHO05D004980 3.8e-48 195.7 155 63.9
EL10Ac9g22874 Beta vulgaris HOM05D004274 ORTHO05D004980 8.4e-48 194.5 121 78.5
Dinv28766 Davidia involucrata HOM05D004274 ORTHO05D004980 1.1e-47 194.1 120 80.8
TAR633G0792 Trochodendron aralioides HOM05D004274 ORTHO05D004980 1.1e-47 194.1 112 84.8
RcHm_v2.0_Chr5g0074031 Rosa chinensis HOM05D004274 ORTHO05D004980 1.4e-47 193.7 112 85.7
arahy.Tifrunner.gnm1.ann1.VY09I5 Arachis hypogaea HOM05D004274 ORTHO05D004980 1.9e-47 193.4 168 59.5
COL.COLO4_34964 Corchorus olitorius HOM05D004274 ORTHO05D004980 3.2e-47 192.6 114 85.1
MELO3C013768.2 Cucumis melo HOM05D004274 ORTHO05D004980 3.2e-47 192.6 235 48.9
Eucgr.D01049 Eucalyptus grandis HOM05D004274 ORTHO05D004980 3.2e-47 192.6 112 82.1
Potri.013G161100 Populus trichocarpa HOM05D004274 ORTHO05D004980 4.2e-47 192.2 126 75.4
Nn4g26698 Nelumbo nucifera HOM05D004274 ORTHO05D004980 5.4e-47 191.8 213 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3513 Anthoceros agrestis HOM05D004274 ORTHO05D004980 7.1e-47 191.4 178 56.7
Sc14g0008130 Simmondsia chinensis HOM05D004274 ORTHO05D004980 7.1e-47 191.4 113 81.4
CARHR272040 Cardamine hirsuta HOM05D004274 ORTHO05D004980 1.2e-46 190.7 119 78.2
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 1.6e-46 190.3 159 57.9
MD03G1046300 Malus domestica HOM05D004274 ORTHO05D004980 1.6e-46 190.3 112 83.0
Lj6g0019258 Lotus japonicus HOM05D004274 ORTHO05D004980 2.7e-46 189.5 151 63.6
Cre17.g698266 Chlamydomonas reinhardtii HOM05D004274 ORTHO05D004980 3.5e-46 189.1 164 59.1
vmacro14660 Vaccinium macrocarpon HOM05D004274 ORTHO05D004980 3.5e-46 189.1 113 81.4
Os11g0120725 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 4.6e-46 188.7 153 61.4
Glyma.18G049000 Glycine max HOM05D004274 ORTHO05D004980 7.9e-46 188.0 153 64.1
SMO351G0049 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 5.1e-45 185.3 158 58.9
Medtr3g062950 Medicago truncatula HOM05D004274 ORTHO05D004980 6.7e-45 184.9 163 62.0
Prupe.6G037600 Prunus persica HOM05D004274 ORTHO05D004980 1.1e-44 184.1 153 63.4
HPP92_015444 Vanilla planifolia HOM05D004274 ORTHO05D004980 1.1e-44 184.1 119 75.6
Atru.chr1.1109 Acer truncatum HOM05D004274 ORTHO05D004980 1.5e-44 183.7 119 75.6
Glyma.11G201800 Glycine max HOM05D004274 ORTHO05D004980 1.9e-44 183.3 151 62.9
RcHm_v2.0_Chr5g0074041 Rosa chinensis HOM05D004274 ORTHO05D004980 1.9e-44 183.3 153 65.4
ATR0743G223 Amborella trichopoda HOM05D004274 ORTHO05D004980 2.5e-44 183.0 113 78.8
Sabra19G0129400 Salix brachista HOM05D004274 ORTHO05D004980 3.3e-44 182.6 112 79.5
SMO163G0095 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 2.1e-43 179.9 174 54.0
Potri.019G133200 Populus trichocarpa HOM05D004274 ORTHO05D004980 2.8e-43 179.5 110 79.1
Atru.chr1.1108 Acer truncatum HOM05D004274 ORTHO05D004980 4.0e-42 175.6 112 77.7
CiPaw.14G047000 Carya illinoinensis HOM05D004274 ORTHO05D004980 5.3e-42 175.3 152 61.2
Sed0025842 Sechium edule HOM05D004274 ORTHO05D004980 1.2e-41 174.1 129 67.4
CDE08G1523 Ceratophyllum demersum HOM05D004274 ORTHO05D004980 4.5e-41 172.2 114 74.6
PRCOL_00000589 Prasinoderma coloniale HOM05D004274 ORTHO05D004980 1.7e-40 170.2 172 51.7
Lalb_Chr15g0085541 Lupinus albus HOM05D004274 ORTHO05D004980 2.2e-40 169.9 117 67.5
TWI32G0546 Tripterygium wilfordii HOM05D004274 ORTHO05D004980 2.2e-40 169.9 187 53.5
MD11G1049100 Malus domestica HOM05D004274 ORTHO05D004980 1.1e-39 167.5 153 60.8
Phvul.006G082500 Phaseolus vulgaris HOM05D004274 ORTHO05D004980 7.1e-39 164.9 151 57.0
MCO06G292 Micromonas commoda HOM05D004274 ORTHO05D004980 9.3e-39 164.5 178 50.0
arahy.Tifrunner.gnm1.ann1.1VUI6H Arachis hypogaea HOM05D004274 ORTHO05D004980 5.1e-37 158.7 134 60.4
Actinidia23822 Actinidia chinensis HOM05D004274 ORTHO05D004980 2.5e-36 156.4 186 52.2
FvH4_3g41230 Fragaria vesca HOM05D004274 ORTHO05D004980 2.5e-36 156.4 153 58.8
ECA236G4332 Erigeron canadensis HOM05D004274 ORTHO05D004980 1.3e-35 154.1 98 75.5
CSS0035716 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 4.8e-35 152.1 147 58.5
Pp3c4_3210 Physcomitrium patens HOM05D004274 ORTHO05D004980 9.0e-34 147.9 126 56.3
Hund24406 Selenicereus undatus HOM05D004274 ORTHO05D004980 4.9e-32 142.1 77 83.1
Ciclev10005970m.g Citrus clementina HOM05D004274 ORTHO05D004980 1.9e-31 140.2 167 49.7
MELO3C014026.2 Cucumis melo HOM05D004274 ORTHO05D004980 2.1e-30 136.7 110 60.9
ClCG00G000300 Citrullus lanatus HOM05D004274 ORTHO05D004980 3.3e-28 129.4 158 48.7
SGA_v2.0_scaffold8G04481 Striga asiatica HOM05D004274 ORTHO05D004980 3.7e-27 125.9 210 42.9
unitig_26.g10228 Utricularia gibba HOM05D004274 ORTHO05D004980 5.3e-26 122.1 119 58.0
QL01p023459 Quercus lobata HOM05D004274 ORTHO05D004980 1.2e-25 120.9 107 60.7
CSS0003603 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 1.7e-24 117.1 72 79.2
FvH4_3g41190 Fragaria vesca HOM05D004274 ORTHO05D004980 1.7e-24 117.1 100 59.0
HanXRQChr08g0231121 Helianthus annuus HOM05D004274 ORTHO05D004980 2.2e-24 116.7 84 73.8
Os12g0120400 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 8.5e-24 114.8 77 64.9
MBI03_g31635_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 2.5e-23 113.2 72 77.8
ClCG00G001760 Citrullus lanatus HOM05D004274 ORTHO05D004980 2.3e-21 106.7 88 62.5
MBI03_g31636_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 3.0e-21 106.3 73 72.6
EL10Ac9g22873 Beta vulgaris HOM05D007938 ORTHO05D009929 1.1e-20 104.4 150 45.3
FAN12G2850 Fragaria x ananassa HOM05D004274 ORTHO05D004980 2.5e-20 103.2 122 55.7
Haze_26272 Corylus avellana HOM05D001787 ORTHO05D007379 1.3e-19 100.9 135 43.0
FvH4_4g07220 Fragaria vesca HOM05D004274 ORTHO05D004980 2.2e-19 100.1 119 53.8
Lsat_1_v5_gn_1_8900 Lactuca sativa HOM05D004274 ORTHO05D004980 3.8e-16 89.4 62 71.0
Solyc09g018630.3 Solanum lycopersicum HOM05D004274 ORTHO05D004980 2.7e-14 83.2 47 80.9
Dinv28765 Davidia involucrata HOM05D004274 ORTHO05D004980 4.4e-12 75.9 65 61.5
arahy.Tifrunner.gnm1.ann1.8HSJ02 Arachis hypogaea HOM05D002696 ORTHO05D011600 1.3e-11 74.3 44 75.0
EL10Ac9g22872 Beta vulgaris HOM05D007938 ORTHO05D009929 3.7e-11 72.8 72 54.2
Solyc09g018650.3 Solanum lycopersicum HOM05D004274 ORTHO05D004980 8.2e-11 71.6 72 56.9
Potri.019G133101 Populus trichocarpa HOM05D004274 ORTHO05D004980 9.1e-10 68.2 73 50.7
QL01p023462 Quercus lobata HOM05D004274 ORTHO05D004980 2.0e-09 67.0 40 72.5
Actinidia34514 Actinidia chinensis HOM05D004274 ORTHO05D004980 3.4e-09 66.2 39 76.9
Hund24328 Selenicereus undatus HOM05D004274 ORTHO05D004980 2.2e-08 63.5 58 53.4
Os09g0246250 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 2.9e-08 63.2 45 57.8
MSTRG.18523 Avicennia marina HOM05D004274 ORTHO05D004980 3.8e-08 62.8 100 39.0
MSTRG.21280 Avicennia marina HOM05D004274 ORTHO05D004980 5.0e-08 62.4 63 50.8
HPP92_015443 Vanilla planifolia HOM05D004274 ORTHO05D004980 6.5e-08 62.0 48 58.3
CDE08G1045 Ceratophyllum demersum HOM05D004274 ORTHO05D004980 1.4e-07 60.8 50 58.0
HanXRQChr08g0231131 Helianthus annuus HOM05D004274 ORTHO05D004980 7.2e-07 58.5 38 65.8
MSTRG.12721 Avicennia marina HOM05D004274 ORTHO05D004980 2.1e-06 57.0 36 66.7
Sabra19G0129300 Salix brachista HOM05D004274 ORTHO05D004980 2.1e-06 57.0 39 69.2
MD03G1046400 Malus domestica HOM05D004274 ORTHO05D004980 3.6e-06 56.2 38 65.8
ATR0620G116 Amborella trichopoda HOM05D004274 ORTHO05D004980 6.1e-06 55.5 40 55.0


User provided reference genes

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