Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 0.0e+00 1574.7 863 100.0
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 0.0e+00 1530.0 863 97.8
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 5.9e-294 1014.2 811 73.4
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 3.9e-290 1001.5 808 70.9
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 5.6e-236 821.6 911 56.5
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 5.8e-233 811.6 911 56.0
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 8.3e-232 807.7 911 55.4
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.0e-221 774.2 911 55.0
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.5e-212 743.0 905 53.4
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 4.8e-211 738.8 910 52.5
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 2.7e-206 723.0 910 51.6
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.3e-205 719.9 929 51.3
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 1.9e-204 716.8 904 51.3
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 2.1e-203 713.4 906 51.9
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 2.4e-202 709.9 911 50.4
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 3.1e-202 709.5 902 53.0
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 3.4e-201 706.1 913 51.8
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 1.7e-200 703.7 904 50.4
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.1e-199 701.0 913 49.6
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.2e-199 699.1 914 49.8
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 5.4e-199 698.7 914 53.4
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.2e-198 697.6 905 53.1
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.2e-198 697.6 913 52.1
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.2e-198 697.6 914 49.5
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.1e-198 696.8 918 51.1
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.6e-198 695.7 914 53.4
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.0e-197 693.0 916 50.3
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.1e-197 692.2 918 50.9
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 2.5e-196 689.9 900 50.1
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 2.5e-196 689.9 906 54.0
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.3e-195 687.6 910 50.3
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 5.3e-194 682.2 910 50.5
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 4.5e-193 679.1 919 50.9
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 6.5e-192 675.2 909 51.9
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 1.4e-191 674.1 912 51.1
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 6.0e-190 668.7 915 48.9
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.0e-189 666.4 915 48.7
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.1e-188 664.5 910 50.7
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.1e-188 664.5 886 50.5
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 5.3e-186 655.6 908 51.7
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 8.4e-184 648.3 905 51.9
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 3.5e-182 642.9 896 45.5
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 3.0e-181 639.8 918 47.4
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.0e-181 639.8 905 47.6
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 3.9e-181 639.4 898 47.6
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 3.9e-181 639.4 905 49.3
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 1.5e-180 637.5 784 53.3
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.5e-180 637.5 912 50.9
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 9.7e-180 634.8 912 48.1
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 2.8e-179 633.3 896 48.8
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 4.8e-179 632.5 904 49.0
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 6.3e-179 632.1 908 48.0
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 1.1e-178 631.3 907 48.1
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 2.4e-178 630.2 873 51.1
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 4.1e-178 629.4 809 53.9
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 2.0e-177 627.1 911 49.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 3.4e-177 626.3 925 50.5
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 3.4e-177 626.3 925 50.5
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 7.7e-177 625.2 906 49.7
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 1.7e-176 624.0 913 47.6
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.7e-176 624.0 909 47.9
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.9e-175 620.5 895 47.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.2e-175 619.8 896 47.8
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 9.4e-175 618.2 889 47.8
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 9.4e-175 618.2 909 50.2
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 1.6e-174 617.5 910 50.1
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.7e-174 616.7 867 50.4
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 2.7e-174 616.7 903 48.9
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 4.6e-174 615.9 900 46.8
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 6.1e-174 615.5 894 47.7
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 7.9e-174 615.1 894 47.7
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.4e-173 614.4 912 48.7
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.1e-172 611.3 894 47.5
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.5e-172 610.9 909 49.9
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 2.2e-171 607.1 923 47.6
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 8.2e-171 605.1 923 47.5
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.1e-170 604.7 923 48.3
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 1.8e-170 604.0 896 45.4
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.2e-169 601.3 923 47.5
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.2e-169 601.3 905 50.1
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 2.0e-169 600.5 905 47.0
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 2.9e-168 596.7 860 49.2
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 2.5e-167 593.6 906 45.8
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.5e-167 593.6 900 47.9
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 7.2e-167 592.0 904 46.1
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 9.4e-167 591.7 902 47.9
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 1.6e-166 590.9 902 47.6
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 7.4e-164 582.0 901 48.9
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 1.4e-162 577.8 908 47.8
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.4e-162 577.8 872 48.6
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.8e-162 577.4 901 46.7
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 7.0e-162 575.5 845 48.2
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.7e-160 570.9 865 48.6
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 3.8e-160 569.7 911 41.7
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 2.7e-158 563.5 889 45.2
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.4e-157 561.2 887 45.7
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.4e-157 561.2 907 46.0
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.8e-157 560.8 906 44.7
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.8e-157 560.8 863 46.3
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 8.8e-157 558.5 866 48.5
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 1.4e-154 551.2 807 50.7
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.4e-154 551.2 906 47.7
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 2.4e-154 550.4 807 50.7
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 1.1e-151 541.6 886 46.0
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 3.2e-151 540.0 886 47.9
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 4.2e-151 539.7 911 45.7
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.2e-151 539.7 866 46.3
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 9.4e-151 538.5 886 47.6
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 4.0e-149 533.1 894 44.0
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 3.4e-148 530.0 893 44.9
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 4.4e-148 529.6 881 45.2
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 4.8e-147 526.2 840 46.8
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 6.3e-147 525.8 849 46.6
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.4e-146 524.6 903 45.0
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.2e-142 511.5 867 47.2
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 8.0e-142 508.8 903 42.5
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 2.3e-141 507.3 849 43.0
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 2.0e-140 504.2 860 43.1
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 7.5e-140 502.3 902 44.3
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.7e-139 501.1 845 41.2
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 3.7e-139 500.0 894 44.4
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 2.4e-138 497.3 892 45.1
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 4.2e-135 486.5 871 43.4
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 8.0e-134 482.3 848 45.3
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 4.4e-132 476.5 885 40.5
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 2.2e-131 474.2 855 43.3
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 8.3e-131 472.2 804 45.4
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 1.1e-130 471.9 870 43.0
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.8e-130 471.1 912 42.7
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 7.0e-130 469.2 876 42.7
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 4.6e-129 466.5 878 43.6
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.0e-128 465.3 860 43.0
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 1.3e-128 464.9 877 42.5
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 6.6e-128 462.6 893 41.2
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 9.5e-127 458.8 839 42.9
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 3.1e-125 453.8 891 41.1
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.0e-124 451.1 881 43.6
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 5.8e-124 449.5 911 41.2
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 9.8e-124 448.7 891 40.3
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 9.8e-124 448.7 736 43.9
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.1e-122 445.3 778 39.8
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 9.2e-122 442.2 894 40.2
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 5.6e-119 433.0 881 42.3
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 1.8e-117 427.9 737 46.4
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 8.9e-117 425.6 892 38.6
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 1.3e-115 421.8 736 46.3
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 3.3e-111 407.1 907 40.1
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 2.9e-107 394.0 873 40.1
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 5.4e-106 389.8 643 50.1
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 4.6e-105 386.7 898 38.6
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.0e-104 385.6 894 40.2
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.7e-104 384.8 891 41.4
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.3e-104 384.4 897 41.6
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 1.4e-101 375.2 755 41.5
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.4e-101 375.2 901 39.1
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.4e-98 364.4 885 38.3
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 1.9e-95 354.8 878 40.3
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 3.3e-95 354.0 779 41.5
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 7.3e-95 352.8 769 40.7
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 3.8e-91 340.5 887 35.9
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.1e-90 339.0 358 58.1
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.6e-89 335.1 448 53.6
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 6.0e-89 333.2 870 38.4
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.5e-71 274.6 828 34.9
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 9.0e-69 266.2 984 33.1
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 4.1e-61 240.7 378 44.2
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 5.5e-58 230.3 420 42.9
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.2e-57 229.2 356 42.1
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 6.3e-54 216.9 296 43.6
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.2e-54 216.5 295 42.7
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 2.1e-49 201.8 374 36.1
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 1.1e-45 189.5 341 39.3
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 1.4e-45 189.1 312 40.1
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 5.3e-45 187.2 237 46.0
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 6.5e-43 180.3 691 30.7
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 2.8e-38 164.9 97 86.6
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.8e-37 162.2 172 54.7
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 8.5e-35 153.3 245 41.6
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 3.0e-32 144.8 348 35.1
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 3.2e-26 124.8 276 54.0
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 2.1e-25 122.1 276 34.4
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 4.5e-20 104.4 297 32.0
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.8e-17 95.1 155 39.4


User provided reference genes

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