Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 1.3e-64 249.6 133 100.0
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 1.3e-64 249.6 133 100.0
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 5.2e-40 167.9 127 63.8
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 8.8e-40 167.2 129 65.1
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.3e-38 163.3 125 64.8
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 5.3e-37 157.9 125 61.6
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 7.0e-37 157.5 127 61.4
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.2e-36 156.8 129 58.9
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 2.2e-35 152.5 125 61.6
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 2.9e-35 152.1 124 59.7
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 5.5e-34 147.9 125 61.6
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 1.2e-33 146.7 126 57.9
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.1e-33 146.0 125 58.4
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 2.3e-32 142.5 113 60.2
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 4.0e-32 141.7 126 55.6
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 4.0e-32 141.7 131 56.5
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 6.8e-32 141.0 124 58.9
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 6.8e-32 141.0 122 55.7
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 3.4e-31 138.7 125 52.8
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 1.7e-30 136.3 126 53.2
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 2.8e-30 135.6 127 57.5
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 4.8e-30 134.8 128 56.2
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 8.3e-30 134.0 122 53.3
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 8.3e-30 134.0 124 53.2
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 8.3e-30 134.0 128 55.5
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.1e-29 133.7 122 54.1
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 1.1e-29 133.7 124 54.8
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 1.8e-29 132.9 124 51.6
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.8e-29 132.9 126 54.0
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 1.8e-29 132.9 125 52.0
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 2.4e-29 132.5 128 55.5
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 3.1e-29 132.1 126 50.0
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 3.1e-29 132.1 123 49.6
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 4.1e-29 131.7 123 54.5
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 4.1e-29 131.7 126 54.0
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 5.3e-29 131.3 123 55.3
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 9.1e-29 130.6 124 52.4
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 9.1e-29 130.6 122 53.3
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.2e-28 130.2 125 49.6
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 1.2e-28 130.2 123 55.3
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.2e-28 130.2 127 55.9
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.2e-28 130.2 124 50.8
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 1.6e-28 129.8 123 52.8
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 1.6e-28 129.8 123 53.7
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 126 50.8
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.7e-28 129.0 126 54.0
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.7e-28 129.0 126 54.0
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.7e-28 129.0 127 54.3
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 4.5e-28 128.3 125 54.4
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 4.5e-28 128.3 122 50.8
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 5.9e-28 127.9 123 52.0
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.0e-27 127.1 132 52.3
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 1.0e-27 127.1 123 52.8
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 1.3e-27 126.7 124 51.6
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 2.9e-27 125.6 127 52.8
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.8e-27 125.2 127 51.2
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 3.8e-27 125.2 141 47.5
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 8.5e-27 124.0 122 51.6
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 1.9e-26 122.9 122 50.8
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 1.9e-26 122.9 123 51.2
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.9e-26 122.9 126 49.2
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 2.5e-26 122.5 122 51.6
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 3.2e-26 122.1 134 50.0
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 5.5e-26 121.3 124 49.2
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 9.4e-26 120.6 138 49.3
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 9.4e-26 120.6 155 45.8
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 1.6e-25 119.8 122 50.0
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 1.6e-25 119.8 144 45.8
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 2.1e-25 119.4 123 48.8
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.1e-25 119.4 141 45.4
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 2.7e-25 119.0 122 49.2
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 3.6e-25 118.6 122 51.6
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 3.6e-25 118.6 125 50.4
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 6.1e-25 117.9 131 48.9
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 6.1e-25 117.9 131 48.9
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 6.1e-25 117.9 122 48.4
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 6.1e-25 117.9 122 49.2
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 1.0e-24 117.1 131 48.1
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.0e-24 117.1 120 52.5
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 1.4e-24 116.7 128 46.1
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 2.3e-24 115.9 113 52.2
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 2.3e-24 115.9 122 50.8
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 2.3e-24 115.9 122 48.4
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 3.0e-24 115.5 131 47.3
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 3.0e-24 115.5 134 47.8
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 8.8e-24 114.0 122 48.4
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.5e-23 113.2 132 48.5
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 2.0e-23 112.8 131 46.6
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 2.0e-23 112.8 122 46.7
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 2.6e-23 112.5 162 39.5
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 7.5e-23 110.9 80 63.8
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.3e-22 110.2 128 46.9
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.3e-22 110.2 128 46.9
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.3e-22 110.2 128 46.9
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 4.8e-22 108.2 122 47.5
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 4.8e-22 108.2 122 45.1
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 2.4e-21 105.9 73 68.5
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.1e-21 105.5 104 52.9
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 5.4e-21 104.8 77 64.9
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 9.1e-21 104.0 116 46.6
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 7.7e-20 100.9 99 50.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 1.0e-19 100.5 74 62.2
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 8.6e-19 97.4 123 44.7
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 8.6e-19 97.4 123 43.9
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 9.5e-18 94.0 73 60.3
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 4.4e-15 85.1 79 50.6
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 9.8e-15 84.0 126 40.5
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 1.1e-13 80.5 97 41.2
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 3.2e-13 79.0 117 39.3
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 5.4e-13 78.2 117 39.3
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 1.0e-11 73.9 37 97.3
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 2.3e-11 72.8 89 49.4
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 1.0e-08 63.9 85 43.5
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 1.8e-08 63.2 96 39.6
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 1.8e-08 63.2 96 39.6
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 3.1e-08 62.4 69 53.6
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 5.2e-08 61.6 85 42.4
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 1.2e-07 60.5 85 42.4
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 2.6e-07 59.3 84 41.7
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 4.9e-06 55.1 48 60.4


User provided reference genes

Program Settings