Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.1e-128 463.4 243 100.0
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 6.4e-121 437.6 243 95.1
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 4.0e-38 162.5 224 46.0
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 1.4e-35 154.1 222 44.1
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.4e-35 153.3 239 44.4
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 4.1e-35 152.5 204 48.0
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.2e-34 151.0 214 45.3
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.7e-34 149.8 218 46.3
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 5.9e-34 148.7 235 41.7
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 7.7e-34 148.3 215 46.0
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 2.2e-33 146.7 230 40.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.2e-33 146.7 215 44.2
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 3.8e-33 146.0 230 43.9
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 5.0e-33 145.6 229 39.3
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 5.0e-33 145.6 219 42.9
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 6.5e-33 145.2 234 41.9
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 8.5e-33 144.8 230 43.5
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 8.5e-33 144.8 224 41.5
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.1e-32 144.4 242 41.3
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.1e-32 144.4 230 40.9
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.5e-32 144.1 241 41.1
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.5e-32 144.1 234 41.5
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.9e-32 143.7 231 40.3
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.2e-32 142.9 241 40.7
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.2e-32 142.5 242 40.9
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 4.2e-32 142.5 228 42.1
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 7.2e-32 141.7 231 38.1
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 9.4e-32 141.4 221 41.6
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 9.4e-32 141.4 218 41.7
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.2e-31 141.0 240 41.7
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.1e-31 140.2 215 44.2
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 2.7e-31 139.8 211 45.5
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.7e-31 139.8 204 44.6
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 2.7e-31 139.8 228 43.0
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 2.7e-31 139.8 231 40.3
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 2.7e-31 139.8 225 41.3
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.7e-31 139.8 249 41.4
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 4.7e-31 139.0 225 40.4
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 6.1e-31 138.7 229 39.7
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 1.0e-30 137.9 229 39.7
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.4e-30 137.5 224 41.5
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.8e-30 137.1 244 39.8
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.3e-30 136.7 225 40.4
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 3.0e-30 136.3 209 41.6
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 5.2e-30 135.6 201 44.3
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 2.6e-29 133.3 245 37.1
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 2.6e-29 133.3 211 44.1
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 3.4e-29 132.9 268 37.7
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.4e-29 132.9 209 43.5
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 9.8e-29 131.3 215 43.3
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.7e-28 130.6 232 39.2
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 2.2e-28 130.2 198 41.9
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.1e-27 127.9 219 39.3
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.4e-27 127.5 217 39.6
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 4.1e-27 125.9 230 39.1
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 7.0e-27 125.2 238 36.6
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 9.1e-27 124.8 119 58.8
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.2e-26 124.4 210 43.3
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 1.6e-26 124.0 235 37.4
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 2.0e-26 123.6 223 38.6
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 2.7e-26 123.2 208 41.3
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 3.5e-26 122.9 205 39.0
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 7.7e-26 121.7 211 39.8
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 7.7e-26 121.7 231 37.2
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.3e-25 120.9 229 37.6
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.3e-25 120.9 232 37.1
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.3e-25 120.9 237 38.0
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.3e-25 120.9 208 38.9
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.7e-25 120.6 237 35.9
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.3e-25 120.2 237 38.0
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 3.8e-25 119.4 225 36.0
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 6.6e-25 118.6 221 37.1
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 8.6e-25 118.2 227 39.2
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 1.5e-24 117.5 230 39.1
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.9e-24 117.1 196 40.3
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.5e-24 116.7 104 60.6
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 3.3e-24 116.3 210 40.0
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 4.2e-24 115.9 203 37.4
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 7.2e-24 115.2 242 35.1
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 2.1e-23 113.6 238 34.9
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 3.6e-23 112.8 237 35.4
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 3.6e-23 112.8 225 34.7
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.4e-22 110.9 241 35.3
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 2.3e-22 110.2 116 53.4
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 2.3e-22 110.2 209 38.8
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 6.8e-22 108.6 238 36.1
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.6e-21 106.7 228 37.3
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 2.8e-20 103.2 211 36.5
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 1.8e-19 100.5 171 41.5
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.2e-19 99.8 183 39.9
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 1.2e-18 97.8 193 36.3
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 5.9e-18 95.5 111 49.5
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.0e-17 94.7 199 38.7
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.3e-17 94.4 191 37.2
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.3e-17 94.4 191 37.2
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 5.0e-17 92.4 190 36.3
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 5.0e-17 92.4 195 37.4
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 8.6e-17 91.7 191 37.2
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 1.1e-16 91.3 191 36.1
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.9e-16 90.5 215 33.5
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 7.3e-16 88.6 190 36.8
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 1.2e-15 87.8 221 32.6
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.1e-15 87.0 190 35.3
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 2.8e-15 86.7 99 50.5
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.0e-14 84.7 215 34.0
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.4e-14 84.3 194 34.5
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 2.3e-14 83.6 91 50.5
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 3.1e-14 83.2 188 36.2
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 8.9e-14 81.6 229 31.0
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.2e-13 81.3 215 34.0
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.2e-13 81.3 215 34.0
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.2e-13 81.3 215 34.0
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.0e-13 80.5 223 31.8
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 2.0e-13 80.5 205 33.2
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 2.6e-13 80.1 205 34.1
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 2.6e-13 80.1 212 34.0
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 7.5e-13 78.6 202 33.2
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 2.2e-12 77.0 233 33.0
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 4.9e-12 75.9 187 34.2
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 3.2e-11 73.2 217 31.8
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 4.1e-11 72.8 115 40.0
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 6.0e-10 68.9 115 39.1
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 6.0e-10 68.9 115 39.1
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.0e-09 68.2 216 33.8
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.1e-08 64.7 178 32.0
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.5e-08 63.5 142 33.8
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 9.5e-08 61.6 167 29.9
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.2e-07 61.2 209 31.1
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 2.1e-07 60.5 128 35.9
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.4e-06 57.8 130 33.8


User provided reference genes

Program Settings