Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 7.2e-245 850.1 424 100.0
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 6.5e-230 800.4 423 95.0
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 3.9e-174 615.1 417 71.5
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 6.6e-174 614.4 390 76.9
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 8.7e-174 614.0 405 75.6
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 1.9e-173 612.8 392 77.3
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 9.0e-171 604.0 405 72.1
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 9.9e-170 600.5 393 73.8
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 9.9e-170 600.5 415 71.6
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 2.2e-169 599.4 406 71.9
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 4.9e-169 598.2 394 73.6
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 8.4e-169 597.4 394 73.4
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 1.1e-168 597.0 389 73.0
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 1.4e-168 596.7 429 71.1
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 3.2e-168 595.5 393 72.3
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 4.2e-168 595.1 430 68.4
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 5.4e-168 594.7 421 69.1
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 7.1e-168 594.3 424 68.9
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 2.7e-167 592.4 422 69.9
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 4.6e-167 591.7 396 71.5
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 6.0e-167 591.3 396 73.5
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 1.0e-166 590.5 409 71.6
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 1.3e-166 590.1 392 72.4
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 1.8e-166 589.7 413 68.8
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 1.8e-166 589.7 423 70.7
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 8.7e-166 587.4 407 69.8
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.9e-165 586.3 404 68.6
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 2.5e-165 585.9 403 70.5
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 1.3e-164 583.6 393 71.8
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 2.8e-164 582.4 436 66.1
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 4.8e-164 581.6 388 71.4
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 1.8e-163 579.7 439 65.6
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 2.4e-163 579.3 391 68.8
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 3.1e-163 578.9 416 68.0
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 4.0e-163 578.6 420 67.4
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 4.0e-163 578.6 424 68.9
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 1.5e-162 576.6 420 69.0
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 2.6e-162 575.9 464 63.1
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 4.5e-162 575.1 390 70.8
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 4.9e-161 571.6 404 68.3
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 3.2e-160 568.9 391 69.8
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 3.2e-160 568.9 401 70.3
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 4.2e-160 568.5 409 68.2
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 4.2e-160 568.5 397 72.0
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 1.2e-159 567.0 455 64.0
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 2.1e-159 566.2 423 68.1
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 2.3e-158 562.8 389 70.2
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 5.1e-158 561.6 423 67.6
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.5e-157 559.3 415 68.2
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 4.3e-157 558.5 396 68.9
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 5.6e-157 558.1 412 66.7
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 5.6e-157 558.1 421 65.6
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 9.6e-157 557.4 396 68.7
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 8.2e-156 554.3 396 69.7
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 1.1e-155 553.9 423 67.8
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 1.4e-155 553.5 391 70.1
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 1.8e-155 553.1 402 67.7
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.4e-155 552.7 420 64.5
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 2.4e-155 552.7 399 68.9
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 5.3e-155 551.6 417 65.7
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 5.3e-155 551.6 419 64.4
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 6.9e-155 551.2 393 67.9
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 9.0e-155 550.8 425 63.8
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 3.4e-154 548.9 425 63.5
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 7.6e-154 547.7 392 67.6
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 4.9e-153 545.0 391 67.8
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 6.5e-153 544.7 394 66.0
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 1.9e-152 543.1 433 64.0
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 3.2e-152 542.3 392 67.1
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 5.5e-152 541.6 393 66.7
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 9.3e-152 540.8 390 67.2
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 9.3e-152 540.8 390 67.2
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 3.9e-150 535.4 411 64.5
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 7.4e-149 531.2 392 66.1
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.1e-147 527.3 419 62.1
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 2.4e-147 526.2 429 61.3
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 2.0e-146 523.1 461 57.5
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 4.5e-146 521.9 399 66.4
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 5.9e-146 521.5 404 64.9
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 1.3e-145 520.4 384 65.9
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 2.9e-145 519.2 397 64.0
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.4e-144 516.9 435 64.1
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 5.1e-142 508.4 394 62.7
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 4.3e-141 505.4 446 58.5
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 1.8e-139 500.0 359 67.4
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 3.2e-136 489.2 356 68.3
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.8e-134 483.4 330 70.6
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.4e-128 463.8 392 60.7
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 4.2e-128 462.2 328 69.8
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 1.8e-126 456.8 303 71.6
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 1.3e-124 450.7 386 54.9
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.2e-124 449.9 330 63.9
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 9.1e-123 444.5 335 67.5
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 9.1e-123 444.5 309 70.6
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.3e-116 424.1 345 66.4
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 2.2e-116 423.3 385 52.7
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 2.9e-113 412.9 280 69.6
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 3.6e-111 406.0 318 63.8
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 6.1e-111 405.2 306 63.7
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 5.2e-110 402.1 409 51.1
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 9.1e-107 391.3 356 52.8
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 5.0e-105 385.6 284 64.4
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 1.5e-104 384.0 284 64.1
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 2.2e-100 370.2 288 61.5
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 9.2e-99 364.8 387 51.9
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.6e-87 327.4 241 67.2
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 6.8e-86 322.0 472 40.9
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 6.4e-84 315.5 213 69.0
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 5.4e-83 312.4 234 63.7
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 3.3e-80 303.1 238 62.2
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 1.2e-69 268.1 345 46.7
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.7e-68 264.2 187 66.8
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 1.5e-64 251.1 171 74.3
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 2.1e-58 230.7 148 73.6
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 1.3e-55 221.5 157 68.2
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.9e-51 207.6 409 36.2
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 4.2e-51 206.5 157 66.2
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 1.2e-50 204.9 189 56.1
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 1.8e-49 201.1 247 44.1
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 4.8e-47 193.0 145 66.9
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 1.4e-38 164.9 434 30.4
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 4.0e-38 163.3 120 67.5
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 2.0e-37 161.0 422 30.1
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 7.6e-37 159.1 412 30.1
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 1.4e-35 154.8 414 29.0
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 3.5e-34 150.2 437 28.6
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 7.9e-26 122.5 97 59.8
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 1.0e-25 122.1 398 27.6
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 2.3e-25 120.9 113 48.7
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 1.1e-24 118.6 78 65.4
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 3.7e-23 113.6 81 64.2
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.8e-23 113.2 94 66.0
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 6.9e-22 109.4 236 37.3
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 2.6e-21 107.5 65 80.0
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 2.3e-17 94.4 87 59.8
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 2.2e-15 87.8 61 73.8
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 8.5e-12 75.9 53 66.0
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 7.4e-08 62.8 37 78.4
Pp3s42_220 Physcomitrium patens HOM05D003206 ORTHO05D310700 4.8e-07 60.1 419 21.7


User provided reference genes

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