Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 4.2e-60 234.6 126 100.0
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.7e-56 222.6 126 96.0
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-50 202.6 128 88.3
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.7e-30 135.6 127 62.2
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 6.6e-29 131.0 113 68.1
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.1e-28 130.2 124 60.5
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.5e-28 129.8 128 60.2
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.9e-28 129.4 125 59.2
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.9e-28 129.4 125 59.2
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 3.3e-28 128.6 127 58.3
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 9.6e-28 127.1 125 58.4
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.2e-27 126.7 127 56.7
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.6e-27 126.3 128 59.4
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 3.6e-27 125.2 127 59.8
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 4.7e-27 124.8 127 59.1
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 4.7e-27 124.8 119 58.8
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 6.2e-27 124.4 118 60.2
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 6.2e-27 124.4 118 60.2
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 6.2e-27 124.4 126 57.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.2e-27 124.4 120 62.5
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 8.1e-27 124.0 126 57.9
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.8e-26 122.9 116 58.6
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.8e-26 122.9 126 56.3
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.8e-26 122.9 119 60.5
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.8e-26 122.9 120 60.8
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 2.4e-26 122.5 125 57.6
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.4e-26 122.5 121 58.7
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.0e-26 121.7 128 55.5
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 4.0e-26 121.7 131 55.7
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 5.2e-26 121.3 119 61.3
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.8e-26 120.9 125 55.2
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.5e-25 119.8 119 58.0
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.5e-25 119.8 120 60.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.0e-25 119.4 118 56.8
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.0e-25 119.4 123 58.5
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.0e-25 119.4 126 56.3
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 2.0e-25 119.4 120 58.3
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.6e-25 119.0 123 56.1
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 2.6e-25 119.0 119 59.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 3.4e-25 118.6 120 56.7
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 5.8e-25 117.9 121 55.4
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 5.8e-25 117.9 121 55.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 5.8e-25 117.9 127 56.7
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 5.8e-25 117.9 120 55.8
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 7.6e-25 117.5 119 59.7
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 7.6e-25 117.5 112 59.8
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.3e-24 116.7 121 54.5
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.3e-24 116.7 123 56.1
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.3e-24 116.7 125 54.4
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-24 116.3 118 55.9
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-24 116.3 118 55.9
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.7e-24 116.3 118 55.9
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.7e-24 116.3 118 55.9
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.7e-24 116.3 118 55.9
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.7e-24 116.3 131 56.5
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.2e-24 115.9 121 54.5
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.2e-24 115.9 121 57.0
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 2.9e-24 115.5 112 58.0
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 2.9e-24 115.5 109 56.9
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.8e-24 115.2 118 54.2
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 3.8e-24 115.2 125 54.4
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 3.8e-24 115.2 127 53.5
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 8.4e-24 114.0 121 53.7
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 8.4e-24 114.0 122 53.3
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.4e-24 114.0 120 57.5
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.4e-23 113.2 121 53.7
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.4e-23 113.2 121 53.7
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.4e-23 113.2 121 52.9
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.4e-23 113.2 109 56.9
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 3.2e-23 112.1 121 52.1
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 4.2e-23 111.7 106 57.5
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 4.2e-23 111.7 122 51.6
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 4.2e-23 111.7 124 51.6
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 5.4e-23 111.3 120 53.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 7.1e-23 110.9 123 54.5
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.3e-23 110.5 94 61.7
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.2e-22 110.2 121 52.9
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.2e-22 110.2 125 52.8
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 2.1e-22 109.4 105 56.2
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.7e-22 109.0 128 53.1
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 2.7e-22 109.0 123 52.8
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 3.5e-22 108.6 118 55.9
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 6.0e-22 107.8 95 60.0
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.0e-22 107.8 124 52.4
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.0e-21 107.1 114 53.5
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.7e-21 106.3 120 51.7
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.7e-21 106.3 119 52.1
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 3.9e-21 105.1 118 52.5
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 3.9e-21 105.1 124 51.6
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 5.1e-21 104.8 107 55.1
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 6.6e-21 104.4 124 51.6
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.1e-20 103.6 130 49.2
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.5e-20 103.2 105 57.1
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.5e-20 103.2 127 52.0
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.5e-20 103.2 123 50.4
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.9e-20 102.8 124 50.0
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.3e-20 102.1 128 45.3
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 4.3e-20 101.7 94 56.4
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 7.3e-20 100.9 107 54.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.1e-19 99.4 97 56.7
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 2.8e-19 99.0 127 48.0
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 2.8e-19 99.0 131 48.9
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 4.8e-19 98.2 127 48.8
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 6.2e-19 97.8 87 59.8
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.1e-18 97.1 124 50.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.1e-18 97.1 125 45.6
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 5.3e-18 94.7 128 48.4
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.5e-17 93.2 124 46.8
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.6e-17 92.4 70 67.1
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.6e-17 92.4 116 47.4
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.6e-17 90.9 103 50.5
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 9.9e-17 90.5 119 42.9
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 2.9e-16 89.0 123 41.5
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 8.4e-16 87.4 85 50.6
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 8.4e-16 87.4 103 46.6
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.9e-15 86.3 78 52.6
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-13 80.1 111 45.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.6e-13 77.8 82 53.7
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 1.5e-12 76.6 112 46.4
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.5e-12 75.9 82 54.9
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 4.8e-11 71.6 84 52.4
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 4.8e-11 71.6 80 57.5
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.1e-10 70.5 114 37.7
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.8e-10 69.7 112 39.3
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.3e-08 63.5 109 33.0


User provided reference genes

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