Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 2.6e-155 552.0 276 100.0
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 7.4e-142 507.3 279 92.8
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 1.1e-87 327.4 269 62.8
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 5.8e-86 321.6 265 62.6
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 6.2e-80 301.6 269 60.2
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.8e-79 300.1 273 56.4
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 6.4e-77 291.6 274 53.6
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 9.3e-76 287.7 237 60.8
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 7.8e-75 284.6 277 53.8
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 1.6e-72 276.9 247 58.3
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 3.6e-72 275.8 269 53.5
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 1.5e-70 270.4 246 56.5
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 2.6e-70 269.6 236 54.7
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 7.6e-70 268.1 242 54.5
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 3.8e-69 265.8 264 54.2
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 3.8e-69 265.8 256 54.3
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 6.4e-69 265.0 242 54.5
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 8.4e-69 264.6 242 55.0
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 1.1e-68 264.2 238 56.7
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 2.4e-68 263.1 237 56.1
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 4.2e-68 262.3 242 54.1
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 7.1e-68 261.5 274 51.1
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 1.2e-67 260.8 243 53.1
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.2e-67 260.8 240 55.8
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 6.0e-67 258.5 262 53.1
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 7.9e-67 258.1 245 53.5
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 1.3e-66 257.3 238 54.2
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 5.1e-66 255.4 248 54.4
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 1.6e-64 250.4 238 52.5
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 8.1e-64 248.1 247 54.7
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.1e-63 247.7 310 47.1
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 2.6e-62 243.0 243 55.1
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 2.6e-62 243.0 243 55.1
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 9.9e-62 241.1 250 53.6
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 8.4e-61 238.0 277 49.8
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 4.2e-60 235.7 242 55.4
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 7.1e-60 235.0 244 52.5
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 3.0e-58 229.6 245 50.6
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 5.1e-58 228.8 259 50.6
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 1.1e-57 227.6 244 53.7
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.6e-56 223.8 261 49.0
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 2.1e-56 223.4 241 51.5
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.1e-56 223.4 246 52.0
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 2.1e-56 223.4 240 50.8
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 2.8e-56 223.0 244 52.5
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 6.9e-55 218.4 268 48.9
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 9.0e-55 218.0 254 49.2
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 2.6e-54 216.5 243 51.0
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 5.8e-54 215.3 244 52.5
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 7.6e-54 214.9 254 50.4
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 1.0e-53 214.5 242 49.6
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 1.7e-53 213.8 241 50.6
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 8.4e-53 211.5 271 42.8
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 1.4e-52 210.7 239 50.2
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 3.5e-51 206.1 269 46.5
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.3e-50 204.1 230 48.7
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 3.0e-50 203.0 275 44.0
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 5.1e-50 202.2 250 46.8
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 1.1e-49 201.1 213 52.1
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 9.7e-49 198.0 256 47.7
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 1.4e-47 194.1 256 48.4
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 1.8e-47 193.7 259 45.9
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 4.1e-47 192.6 258 48.1
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 2.0e-46 190.3 243 47.7
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 2.0e-46 190.3 256 46.1
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 5.9e-46 188.7 250 46.8
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 7.7e-46 188.3 250 46.4
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.3e-45 187.6 250 46.8
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.3e-45 187.6 250 46.8
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 1.7e-45 187.2 243 48.6
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 2.9e-45 186.4 260 48.1
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 8.5e-45 184.9 237 48.1
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 3.2e-44 183.0 251 46.6
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 3.2e-44 183.0 178 52.2
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 3.2e-44 183.0 253 45.8
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 5.5e-44 182.2 243 46.1
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.6e-43 180.6 169 56.8
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.6e-43 180.6 295 39.0
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 2.7e-43 179.9 245 46.1
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 3.6e-43 179.5 246 45.5
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 3.6e-43 179.5 256 39.5
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 4.6e-43 179.1 245 46.1
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.4e-42 177.6 256 40.2
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 3.0e-42 176.4 302 36.1
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 5.1e-42 175.6 238 45.8
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 8.8e-42 174.9 245 44.9
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 1.5e-41 174.1 240 43.8
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 4.3e-41 172.6 249 43.8
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 2.0e-38 163.7 259 38.2
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 5.0e-37 159.1 196 48.5
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 5.1e-34 149.1 346 29.5
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 6.7e-34 148.7 147 57.1
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 9.7e-33 144.8 147 55.1
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 3.7e-32 142.9 246 37.0
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 3.5e-30 136.3 98 64.3
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 2.2e-29 133.7 125 51.2
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.1e-28 131.3 140 50.7
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.8e-26 124.0 180 43.9
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 3.8e-21 106.3 103 54.4
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 9.4e-20 101.7 202 34.2
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 1.8e-15 87.4 100 48.0
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.0e-14 84.0 147 40.1
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 1.5e-12 77.8 276 25.7
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 8.8e-10 68.6 109 37.6
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 4.4e-09 66.2 284 22.5
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 1.3e-08 64.7 258 25.6
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 3.5e-06 56.6 279 26.9
QL08p011145 Quercus lobata HOM05D007003 ORTHO05D008499 7.7e-06 55.5 139 30.9


User provided reference genes

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