Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 1.0e-44 183.0 89 100.0
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 1.0e-44 183.0 89 100.0
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 2.6e-35 151.8 89 82.0
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 9.7e-35 149.8 89 79.8
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 3.7e-34 147.9 89 79.8
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 3.7e-34 147.9 77 85.7
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 3.7e-34 147.9 78 85.9
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 8.2e-34 146.7 84 79.8
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 1.4e-33 146.0 77 84.4
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.4e-33 146.0 89 74.2
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 3.1e-33 144.8 75 85.3
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 5.3e-33 144.1 89 77.5
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 5.3e-33 144.1 82 78.0
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 9.1e-33 143.3 89 77.5
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 9.1e-33 143.3 89 77.5
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 1.2e-32 142.9 84 75.0
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 1.2e-32 142.9 82 76.8
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 1.2e-32 142.9 80 80.0
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.6e-32 142.5 89 74.2
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 1.6e-32 142.5 89 76.4
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 2.0e-32 142.1 89 74.2
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 2.6e-32 141.7 89 76.4
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 5.9e-32 140.6 89 75.3
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 7.7e-32 140.2 81 77.8
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.7e-32 140.2 81 77.8
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 1.0e-31 139.8 89 73.0
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 1.3e-31 139.4 77 77.9
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 1.7e-31 139.0 84 75.0
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.2e-31 138.7 81 76.5
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.2e-31 138.7 81 76.5
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 2.2e-31 138.7 84 72.6
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.9e-31 138.3 80 76.2
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 2.9e-31 138.3 84 72.6
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 3.8e-31 137.9 87 77.0
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 5.0e-31 137.5 78 74.4
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 5.0e-31 137.5 78 75.6
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 5.0e-31 137.5 79 82.3
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 5.0e-31 137.5 84 73.8
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 6.5e-31 137.1 74 75.7
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 1.5e-30 136.0 98 66.3
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 1.5e-30 136.0 96 69.8
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 2.5e-30 135.2 89 70.8
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 4.2e-30 134.4 89 70.8
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 4.2e-30 134.4 87 73.6
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 1.2e-29 132.9 78 74.4
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 1.2e-29 132.9 73 79.5
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 1.2e-29 132.9 78 71.8
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 2.1e-29 132.1 90 70.0
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 2.1e-29 132.1 78 73.1
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 2.1e-29 132.1 82 68.3
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 2.1e-29 132.1 78 74.4
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 3.6e-29 131.3 74 77.0
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 3.6e-29 131.3 89 71.9
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 4.7e-29 131.0 90 68.9
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 4.7e-29 131.0 90 68.9
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 4.7e-29 131.0 90 68.9
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 6.1e-29 130.6 90 68.9
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 6.1e-29 130.6 90 68.9
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 8.0e-29 130.2 75 77.3
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 1.0e-28 129.8 78 73.1
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 1.0e-28 129.8 74 75.7
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 1.0e-28 129.8 74 75.7
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 1.0e-28 129.8 90 68.9
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 1.4e-28 129.4 90 67.8
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 1.8e-28 129.0 78 71.8
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 1.8e-28 129.0 90 67.8
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 3.0e-28 128.3 78 70.5
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 4.0e-28 127.9 88 68.2
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 5.2e-28 127.5 72 75.0
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 6.7e-28 127.1 89 67.4
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 6.7e-28 127.1 63 88.9
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 8.8e-28 126.7 79 69.6
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 1.2e-27 126.3 84 69.0
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 1.5e-27 125.9 85 67.1
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 1.5e-27 125.9 89 68.5
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 1.5e-27 125.9 79 67.1
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 2.0e-27 125.6 89 68.5
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 2.0e-27 125.6 79 68.4
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 2.0e-27 125.6 79 68.4
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 2.6e-27 125.2 74 73.0
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 3.3e-27 124.8 74 75.7
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 3.3e-27 124.8 94 64.9
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 4.4e-27 124.4 68 77.9
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 4.4e-27 124.4 85 65.9
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 5.7e-27 124.0 78 70.5
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 5.7e-27 124.0 78 70.5
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 5.7e-27 124.0 78 70.5
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 5.7e-27 124.0 89 67.4
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 5.7e-27 124.0 68 76.5
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 7.5e-27 123.6 86 65.1
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 7.5e-27 123.6 89 64.0
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 9.7e-27 123.2 83 66.3
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 9.7e-27 123.2 80 70.0
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 1.3e-26 122.9 89 66.3
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.3e-26 122.9 89 64.0
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 1.7e-26 122.5 75 78.7
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 6.3e-26 120.6 87 63.2
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 6.3e-26 120.6 78 69.2
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 1.1e-25 119.8 90 66.7
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 1.4e-25 119.4 76 67.1
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 1.4e-25 119.4 65 76.9
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 1.8e-25 119.0 67 77.6
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 2.4e-25 118.6 89 65.2
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 2.4e-25 118.6 90 61.1
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 2.4e-25 118.6 78 69.2
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 3.1e-25 118.2 89 62.9
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 5.3e-25 117.5 89 62.9
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 5.3e-25 117.5 89 62.9
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 7.0e-25 117.1 71 77.5
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 9.1e-25 116.7 89 62.9
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 9.1e-25 116.7 73 74.0
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 1.2e-24 116.3 84 64.3
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 1.6e-24 115.9 72 72.2
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 2.7e-24 115.2 73 75.3
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 2.7e-24 115.2 73 75.3
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 2.7e-24 115.2 67 76.1
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 5.9e-24 114.0 75 65.3
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 7.7e-24 113.6 107 52.3
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 7.7e-24 113.6 75 64.0
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 1.0e-23 113.2 74 67.6
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 1.3e-23 112.8 90 62.2
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 3.8e-23 111.3 87 60.9
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 3.8e-23 111.3 53 88.7
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 8.5e-23 110.2 90 60.0
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 1.1e-22 109.8 85 58.8
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 1.5e-22 109.4 52 88.5
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 2.5e-22 108.6 72 68.1
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 3.2e-22 108.2 54 81.5
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 3.2e-22 108.2 75 74.7
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 7.2e-22 107.1 73 68.5
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 1.2e-21 106.3 91 58.2
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 2.7e-21 105.1 71 62.0
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 3.6e-21 104.8 89 59.6
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 4.7e-21 104.4 72 63.9
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 6.1e-21 104.0 74 66.2
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 6.1e-21 104.0 55 78.2
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 1.4e-20 102.8 79 51.9
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 1.5e-19 99.4 57 75.4
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 1.5e-19 99.4 52 84.6
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 7.5e-19 97.1 56 75.0
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 7.5e-19 97.1 90 57.8
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 7.5e-19 97.1 89 57.3
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 9.8e-19 96.7 57 70.2
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 9.8e-19 96.7 68 64.7
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 2.2e-18 95.5 97 48.5
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 8.3e-18 93.6 52 78.8
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 1.8e-17 92.4 76 53.9
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 1.6e-16 89.4 64 56.2
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 2.3e-15 85.5 72 55.6
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 8.6e-15 83.6 90 48.9
TPR.G13621 Trifolium pratense HOM05D004551 ORTHO05D005262 1.5e-14 82.8 40 87.5
Rhsim13G0075400 Rhododendron simsii HOM05D004551 ORTHO05D005262 5.5e-14 80.9 59 64.4
SHI22087 Sapria himalayana HOM05D004551 ORTHO05D005262 4.4e-11 71.2 59 54.2
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 1.4e-09 66.2 41 65.9
MD02G1278800 Malus domestica HOM05D004551 ORTHO05D005262 1.8e-09 65.9 53 58.5
PRCOL_00001542 Prasinoderma coloniale HOM05D002457 ORTHO05D005262 7.0e-09 63.9 58 46.6
SGA_v2.0_scaffold75G24985 Striga asiatica HOM05D001002 ORTHO05D000802 7.0e-09 63.9 45 62.2
Haze_27300 Corylus avellana HOM05D004551 ORTHO05D005262 2.3e-07 58.9 62 37.1
Cfa026385 Carpinus fangiana HOM05D004551 ORTHO05D005262 6.6e-07 57.4 44 52.3


User provided reference genes

Program Settings