Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1651 Papaver somniferum HOM05D003139 ORTHO05D003540 4.3e-173 611.3 322 100.0
PSO384G0491 Papaver somniferum HOM05D003139 ORTHO05D003540 3.3e-141 505.4 292 93.2
Nn6g34887 Nelumbo nucifera HOM05D003139 ORTHO05D003540 5.3e-30 136.0 302 39.1
Solyc09g009840.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 6.0e-26 122.5 247 40.9
AUR62006190 Chenopodium quinoa HOM05D003139 ORTHO05D003540 7.9e-26 122.1 295 38.3
EL10Ac7g16909 Beta vulgaris HOM05D003139 ORTHO05D003540 1.0e-25 121.7 302 37.7
FAN09G1837 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.8e-25 120.9 255 42.4
MSTRG.10370 Avicennia marina HOM05D003139 ORTHO05D003540 2.3e-25 120.6 273 41.0
FAN14G1758 Fragaria x ananassa HOM05D003139 ORTHO05D003540 3.0e-25 120.2 257 42.0
FvH4_6g18850 Fragaria vesca HOM05D003139 ORTHO05D003540 1.1e-24 118.2 257 41.6
FAN05G0400 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.5e-24 117.9 257 40.9
FAN05G1773 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.5e-24 117.9 257 40.9
Haze_19619 Corylus avellana HOM05D003139 ORTHO05D003540 1.9e-24 117.5 262 38.5
PGR142G1499 Punica granatum HOM05D003139 ORTHO05D003540 1.9e-24 117.5 264 38.6
CiPaw.10G010300 Carya illinoinensis HOM05D003139 ORTHO05D003540 2.5e-24 117.1 262 40.8
MD14G1023600 Malus domestica HOM05D003139 ORTHO05D003540 2.5e-24 117.1 258 37.6
Ah.15g090850 Amaranthus hybridus HOM05D003139 ORTHO05D003540 3.3e-24 116.7 296 38.2
FAN02G0223 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.3e-24 116.3 257 40.5
Cfa016615 Carpinus fangiana HOM05D003139 ORTHO05D003540 5.6e-24 115.9 262 38.9
Aqoxy4G02769 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 7.4e-24 115.5 288 37.8
Sopen09g004600 Solanum pennellii HOM05D003139 ORTHO05D003540 9.6e-24 115.2 249 39.4
AUR62028515 Chenopodium quinoa HOM05D003139 ORTHO05D003540 2.1e-23 114.0 307 35.8
Migut.L01785 Erythranthe guttata HOM05D003139 ORTHO05D003540 2.1e-23 114.0 281 37.4
Glyma.03G196500 Glycine max HOM05D003139 ORTHO05D003540 2.8e-23 113.6 274 39.1
ClCG10G018920 Citrullus lanatus HOM05D003139 ORTHO05D003540 6.2e-23 112.5 257 40.9
CsaV3_3G037330 Cucumis sativus L. HOM05D003139 ORTHO05D003540 1.8e-22 110.9 258 38.4
DCAR_020744 Daucus carota HOM05D003139 ORTHO05D003540 1.8e-22 110.9 246 41.1
Duzib093G1338 Durio zibethinus HOM05D003139 ORTHO05D003540 1.8e-22 110.9 251 38.6
Migut.J01028 Erythranthe guttata HOM05D003139 ORTHO05D003540 3.1e-22 110.2 271 38.4
Prupe.7G109200 Prunus persica HOM05D003139 ORTHO05D003540 3.1e-22 110.2 268 39.6
TAR633G0951 Trochodendron aralioides HOM05D003139 ORTHO05D003540 4.0e-22 109.8 264 38.3
CiPaw.09G014800 Carya illinoinensis HOM05D003139 ORTHO05D003540 6.9e-22 109.0 260 36.5
Psat6g080520 Pisum sativum HOM05D003139 ORTHO05D003540 6.9e-22 109.0 245 40.8
TAR369G0615 Trochodendron aralioides HOM05D003139 ORTHO05D003540 6.9e-22 109.0 281 34.5
Duzib128G1370 Durio zibethinus HOM05D003139 ORTHO05D003540 9.0e-22 108.6 251 38.2
MD12G1024700 Malus domestica HOM05D003139 ORTHO05D003540 9.0e-22 108.6 264 37.1
Manes.08G025900 Manihot esculenta HOM05D003139 ORTHO05D003540 9.0e-22 108.6 281 38.8
TWI53G0306 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 9.0e-22 108.6 276 38.8
Nitab4.5_0000692g0050 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.2e-21 108.2 256 40.2
PGSC0003DMG400008878 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.2e-21 108.2 252 39.3
SalBow5G1418 Salvia bowleyana HOM05D003139 ORTHO05D003540 2.0e-21 107.5 245 38.8
Ca_08987_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 4.5e-21 106.3 256 38.3
Gohir.A01G206000 Gossypium hirsutum HOM05D003139 ORTHO05D003540 5.8e-21 105.9 253 37.9
Lalb_Chr25g0288311 Lupinus albus HOM05D003139 ORTHO05D003540 5.8e-21 105.9 269 38.7
Glyma.19G194957 Glycine max HOM05D003139 ORTHO05D003540 7.6e-21 105.5 277 38.3
Ca_00900_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 9.9e-21 105.1 250 40.4
Gohir.D01G195400 Gossypium hirsutum HOM05D003139 ORTHO05D003540 1.7e-20 104.4 252 37.3
Gorai.002G239600 Gossypium raimondii HOM05D003139 ORTHO05D003540 1.7e-20 104.4 252 37.3
Peaxi162Scf00404g00061 Petunia axillaris HOM05D003139 ORTHO05D003540 1.7e-20 104.4 251 40.2
Thecc.05G090100 Theobroma cacao HOM05D003139 ORTHO05D003540 1.7e-20 104.4 255 36.1
HanXRQChr08g0229891 Helianthus annuus HOM05D003139 ORTHO05D003540 2.9e-20 103.6 257 37.4
Sed0022451 Sechium edule HOM05D003139 ORTHO05D003540 2.9e-20 103.6 243 42.4
Aa31LG10G7720 Aethionema arabicum HOM05D003139 ORTHO05D003540 3.8e-20 103.2 255 40.0
Potri.006G212800 Populus trichocarpa HOM05D003139 ORTHO05D003540 3.8e-20 103.2 264 37.5
Duzib106G1991 Durio zibethinus HOM05D003139 ORTHO05D003540 4.9e-20 102.8 252 36.1
Glyma.13G154300 Glycine max HOM05D003139 ORTHO05D003540 4.9e-20 102.8 266 37.2
Lalb_Chr20g0111681 Lupinus albus HOM05D003139 ORTHO05D003540 4.9e-20 102.8 250 37.2
Sabra06G0163800 Salix brachista HOM05D003139 ORTHO05D003540 4.9e-20 102.8 254 36.6
Sc20g0006320 Simmondsia chinensis HOM05D003139 ORTHO05D003540 4.9e-20 102.8 285 37.2
Nn2g14171 Nelumbo nucifera HOM05D003139 ORTHO05D003540 6.4e-20 102.4 293 33.8
Ah.08g210540 Amaranthus hybridus HOM05D003139 ORTHO05D003540 8.4e-20 102.1 296 37.2
Aqoxy2G01158 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 1.9e-19 100.9 262 35.1
COL.COLO4_29723 Corchorus olitorius HOM05D003139 ORTHO05D003540 2.4e-19 100.5 251 35.5
BolC4t28004H Brassica oleracea HOM05D003139 ORTHO05D003540 3.2e-19 100.1 247 35.2
Lsat_1_v5_gn_5_164981 Lactuca sativa HOM05D003139 ORTHO05D003540 3.2e-19 100.1 247 35.6
Phvul.001G190700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 3.2e-19 100.1 262 38.9
Cpa.g.sc5.12 Carica papaya HOM05D003139 ORTHO05D003540 4.2e-19 99.8 263 35.7
Oeu047862.1 Olea europaea HOM05D003139 ORTHO05D003540 4.2e-19 99.8 242 36.8
Sed0002377 Sechium edule HOM05D003139 ORTHO05D003540 4.2e-19 99.8 243 37.0
BraA04t18268Z Brassica rapa HOM05D003139 ORTHO05D003540 5.5e-19 99.4 247 34.8
Psat3g032560 Pisum sativum HOM05D003139 ORTHO05D003540 5.5e-19 99.4 257 38.9
CANSAT64G2974 Cannabis sativa HOM05D003139 ORTHO05D003540 7.1e-19 99.0 270 37.4
Medtr1g059890 Medicago truncatula HOM05D003139 ORTHO05D003540 7.1e-19 99.0 259 38.2
AT3G52710 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 9.3e-19 98.6 258 36.4
Lj5g0002620 Lotus japonicus HOM05D003139 ORTHO05D003540 9.3e-19 98.6 259 36.7
BcaC02g07620 Brassica carinata HOM05D003139 ORTHO05D003540 2.1e-18 97.4 247 34.8
Gohir.D04G099100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.1e-18 97.4 255 37.3
Gorai.009G401500 Gossypium raimondii HOM05D003139 ORTHO05D003540 2.1e-18 97.4 255 37.3
Actinidia05423 Actinidia chinensis HOM05D003139 ORTHO05D003540 2.7e-18 97.1 245 36.7
Lj1g0000022 Lotus japonicus HOM05D003139 ORTHO05D003540 2.7e-18 97.1 244 37.7
Cc06_g05890 Coffea canephora HOM05D003139 ORTHO05D003540 6.0e-18 95.9 243 37.9
CsaV3_6G040710 Cucumis sativus L. HOM05D003139 ORTHO05D003540 6.0e-18 95.9 246 37.4
Dinv21200 Davidia involucrata HOM05D003139 ORTHO05D003540 7.9e-18 95.5 245 36.7
Gohir.A04G062300 Gossypium hirsutum HOM05D003139 ORTHO05D003540 1.8e-17 94.4 254 37.0
Nitab4.5_0001933g0030 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.8e-17 94.4 252 38.5
Oeu017682.1 Olea europaea HOM05D003139 ORTHO05D003540 3.0e-17 93.6 249 36.1
Manes.09G054800 Manihot esculenta HOM05D003139 ORTHO05D003540 3.9e-17 93.2 273 35.5
Lalb_Chr02g0154921 Lupinus albus HOM05D003139 ORTHO05D003540 6.7e-17 92.4 244 34.8
Sabra16G0085400 Salix brachista HOM05D003139 ORTHO05D003540 6.7e-17 92.4 267 34.1
Sp4g18440 Schrenkiella parvula HOM05D003139 ORTHO05D003540 8.7e-17 92.0 252 36.5
VMungo0720G0359 Vigna mungo HOM05D003139 ORTHO05D003540 8.7e-17 92.0 256 36.7
Carub.0005s1916 Capsella rubella HOM05D003139 ORTHO05D003540 1.1e-16 91.7 263 37.3
Hma1.2p1_0820F.1_g223870 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 1.1e-16 91.7 261 35.6
Oeu025672.1 Olea europaea HOM05D003139 ORTHO05D003540 1.1e-16 91.7 243 36.6
C08p27990 Brassica napus HOM05D003139 ORTHO05D003540 1.5e-16 91.3 253 38.3
BolC8t50411H Brassica oleracea HOM05D003139 ORTHO05D003540 1.5e-16 91.3 253 38.3
BcaC02g11724 Brassica carinata HOM05D003139 ORTHO05D003540 1.9e-16 90.9 245 35.1
C04p11930 Brassica napus HOM05D003139 ORTHO05D003540 1.9e-16 90.9 245 35.1
BolC4t22840H Brassica oleracea HOM05D003139 ORTHO05D003540 1.9e-16 90.9 245 35.1
Lsat_1_v5_gn_9_20601 Lactuca sativa HOM05D003139 ORTHO05D003540 1.9e-16 90.9 264 35.6
BcaC07g39636 Brassica carinata HOM05D003139 ORTHO05D003540 3.3e-16 90.1 254 37.8
BraA05t19916Z Brassica rapa HOM05D003139 ORTHO05D003540 4.3e-16 89.7 243 34.6
Thhalv10011162m.g Eutrema salsugineum HOM05D003139 ORTHO05D003540 4.3e-16 89.7 266 36.5
Gorai.006G155000 Gossypium raimondii HOM05D003139 ORTHO05D003540 4.3e-16 89.7 244 36.5
TPR.G23344 Trifolium pratense HOM05D003139 ORTHO05D003540 4.3e-16 89.7 260 35.8
VMungo1383G1679 Vigna mungo HOM05D003139 ORTHO05D003540 4.3e-16 89.7 264 35.6
Atru.chr8.1495 Acer truncatum HOM05D003139 ORTHO05D003540 5.6e-16 89.4 260 35.4
AL5G33470 Arabidopsis lyrata HOM05D003139 ORTHO05D003540 5.6e-16 89.4 265 37.7
CARHR130460 Cardamine hirsuta HOM05D003139 ORTHO05D003540 5.6e-16 89.4 247 36.8
Eucgr.A02660 Eucalyptus grandis HOM05D003139 ORTHO05D003540 5.6e-16 89.4 144 44.4
Gohir.A09G139500 Gossypium hirsutum HOM05D003139 ORTHO05D003540 5.6e-16 89.4 249 34.9
Oeu047203.1 Olea europaea HOM05D003139 ORTHO05D003540 5.6e-16 89.4 251 36.3
Sp5g09630 Schrenkiella parvula HOM05D003139 ORTHO05D003540 5.6e-16 89.4 259 37.8
THA.LOC104827508 Tarenaya hassleriana HOM05D003139 ORTHO05D003540 5.6e-16 89.4 259 36.7
AT2G36220 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 7.4e-16 89.0 259 37.1
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 7.4e-16 89.0 252 37.3
CARHR162580 Cardamine hirsuta HOM05D003139 ORTHO05D003540 9.6e-16 88.6 261 35.2
A05p09620 Brassica napus HOM05D003139 ORTHO05D003540 1.3e-15 88.2 243 34.2
Gohir.D09G135100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 1.6e-15 87.8 244 36.1
HanXRQChr01g0010381 Helianthus annuus HOM05D003139 ORTHO05D003540 1.6e-15 87.8 247 35.2
A09p45800 Brassica napus HOM05D003139 ORTHO05D003540 2.1e-15 87.4 254 36.6
BraA09t40041Z Brassica rapa HOM05D003139 ORTHO05D003540 2.1e-15 87.4 254 36.6
ClCG04G010080 Citrullus lanatus HOM05D003139 ORTHO05D003540 2.8e-15 87.0 249 35.3
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 4.8e-15 86.3 254 37.4
HanXRQChr04g0109341 Helianthus annuus HOM05D003139 ORTHO05D003540 4.8e-15 86.3 257 36.6
Lsat_1_v5_gn_8_77361 Lactuca sativa HOM05D003139 ORTHO05D003540 4.8e-15 86.3 258 34.9
MBI11_g26446_MAGBIO Magnolia biondii HOM05D003139 ORTHO05D003540 4.8e-15 86.3 284 33.1
Sopen10g032810 Solanum pennellii HOM05D003139 ORTHO05D003540 6.2e-15 85.9 278 32.7
SGA_v2.0_scaffold13G06709 Striga asiatica HOM05D003139 ORTHO05D003540 6.2e-15 85.9 260 34.2
SGA_v2.0_scaffold35G14064 Striga asiatica HOM05D003139 ORTHO05D003540 6.2e-15 85.9 240 32.5
AL4G32320 Arabidopsis lyrata HOM05D003139 ORTHO05D003540 1.4e-14 84.7 254 36.2
TPR.G9897 Trifolium pratense HOM05D003139 ORTHO05D003540 1.4e-14 84.7 246 35.8
Eucgr.K02030 Eucalyptus grandis HOM05D003139 ORTHO05D003540 1.8e-14 84.3 221 33.9
Medtr7g104725 Medicago truncatula HOM05D003139 ORTHO05D003540 1.8e-14 84.3 259 34.7
Thhalv10017798m.g Eutrema salsugineum HOM05D003139 ORTHO05D003540 2.4e-14 84.0 251 36.3
Glyma.10G073600 Glycine max HOM05D003139 ORTHO05D003540 2.4e-14 84.0 268 35.8
QL07p038927 Quercus lobata HOM05D003139 ORTHO05D003540 2.4e-14 84.0 256 33.2
Sed0010191 Sechium edule HOM05D003139 ORTHO05D003540 2.4e-14 84.0 246 36.6
Solyc10g083330.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 2.4e-14 84.0 278 32.4
THA.LOC104804904 Tarenaya hassleriana HOM05D003139 ORTHO05D003540 2.4e-14 84.0 187 41.2
Phvul.007G152700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 3.1e-14 83.6 213 38.0
BcaB06g28923 Brassica carinata HOM05D003139 ORTHO05D003540 4.0e-14 83.2 244 32.8
CSS0031410 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 4.0e-14 83.2 135 42.2
Nitab4.5_0014515g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 4.0e-14 83.2 252 34.9
CSS0009772 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 5.3e-14 82.8 250 34.8
BcaB01g00349 Brassica carinata HOM05D003139 ORTHO05D003540 1.2e-13 81.6 251 36.3
Potri.016G079500 Populus trichocarpa HOM05D003139 ORTHO05D003540 2.0e-13 80.9 266 33.8
Sabra16G0087500 Salix brachista HOM05D003139 ORTHO05D003540 2.0e-13 80.9 298 32.6
BcaB02g09375 Brassica carinata HOM05D003139 ORTHO05D003540 3.4e-13 80.1 244 33.2
ECA248G2961 Erigeron canadensis HOM05D003139 ORTHO05D003540 4.5e-13 79.7 251 33.5
MELO3C024549.2 Cucumis melo HOM05D003139 ORTHO05D003540 5.8e-13 79.3 244 33.2
Rhsim04G0132000 Rhododendron simsii HOM05D003139 ORTHO05D003540 7.6e-13 79.0 252 33.7
MELO3C009477.2 Cucumis melo HOM05D003139 ORTHO05D003540 1.0e-12 78.6 252 32.5
ATR0776G084 Amborella trichopoda HOM05D003139 ORTHO05D003540 1.3e-12 78.2 238 33.2
TWI74G1218 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 1.3e-12 78.2 271 32.8
PGSC0003DMG400028163 Solanum tuberosum HOM05D003139 ORTHO05D003540 3.8e-12 76.6 277 31.8
Actinidia31269 Actinidia chinensis HOM05D003139 ORTHO05D003540 4.9e-12 76.3 246 35.8
Aa31LG5G21340 Aethionema arabicum HOM05D003139 ORTHO05D003540 2.5e-11 73.9 238 35.7
HanXRQChr04g0109331 Helianthus annuus HOM05D003139 ORTHO05D003540 3.2e-11 73.6 265 36.2
SGA_v2.0_scaffold184G39967 Striga asiatica HOM05D003139 ORTHO05D003540 3.2e-11 73.6 242 33.5
BolC4t25610H Brassica oleracea HOM05D003139 ORTHO05D003540 5.5e-11 72.8 131 45.8
Oeu056878.1 Olea europaea HOM05D003139 ORTHO05D003540 1.6e-10 71.2 178 39.9
DCAR_009168 Daucus carota HOM05D003139 ORTHO05D003540 2.1e-10 70.9 247 32.4
CDE02G4274 Ceratophyllum demersum HOM05D003139 ORTHO05D003540 3.5e-10 70.1 264 32.2
Ciclev10012256m.g Citrus clementina HOM05D003139 ORTHO05D003540 7.9e-10 68.9 276 30.1
Dinv01029 Davidia involucrata HOM05D003139 ORTHO05D003540 1.0e-09 68.6 275 33.5
Dinv10925 Davidia involucrata HOM05D003139 ORTHO05D003540 1.0e-09 68.6 275 33.5
DCAR_013395 Daucus carota HOM05D003139 ORTHO05D003540 1.3e-09 68.2 128 41.4
Hma1.2p1_0874F.1_g231330 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 1.3e-09 68.2 132 46.2
unitig_8.g4968 Utricularia gibba HOM05D003139 ORTHO05D003540 3.9e-09 66.6 233 30.9
Carub.0004s1798 Capsella rubella HOM05D003139 ORTHO05D003540 1.1e-08 65.1 250 31.2
ECA247G2190 Erigeron canadensis HOM05D003139 ORTHO05D003540 1.1e-08 65.1 283 32.9
Dinv11834 Davidia involucrata HOM05D003139 ORTHO05D003540 1.5e-08 64.7 149 42.3
CSS0050344 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 2.5e-08 63.9 193 34.2
HPP92_006349 Vanilla planifolia HOM05D003139 ORTHO05D003540 1.6e-07 61.2 249 31.3
SHI12239 Sapria himalayana HOM05D003139 ORTHO05D003540 2.8e-07 60.5 198 34.8
A04p27750 Brassica napus HOM05D003139 ORTHO05D003540 3.7e-07 60.1 168 33.9
CDE08G0328 Ceratophyllum demersum HOM05D003139 ORTHO05D003540 3.7e-07 60.1 243 31.3
HPP92_011492 Vanilla planifolia HOM05D003139 ORTHO05D003540 1.4e-06 58.2 260 28.1
PGR004G2661 Punica granatum HOM05D003139 ORTHO05D003540 3.1e-06 57.0 273 28.2
Actinidia07925 Actinidia chinensis HOM05D003139 ORTHO05D003540 5.3e-06 56.2 201 35.3


User provided reference genes

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