Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1421 Papaver somniferum HOM05D002160 ORTHO05D002012 5.7e-26 120.6 70 100.0
PSO151G0128 Papaver somniferum HOM05D002160 ORTHO05D002012 5.3e-24 114.0 70 95.7
PSO339G1859 Papaver somniferum HOM05D002160 ORTHO05D002012 2.0e-23 112.1 70 92.9
PSO151G0155 Papaver somniferum HOM05D002160 ORTHO05D002012 8.5e-14 80.1 72 73.6
PSO339G0803 Papaver somniferum HOM05D002160 ORTHO05D002012 8.5e-14 80.1 72 73.6
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 6.3e-09 63.9 73 63.0
HanXRQChr08g0235781 Helianthus annuus HOM05D002160 ORTHO05D002012 6.3e-09 63.9 71 66.2
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 8.2e-09 63.5 73 64.4
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 8.2e-09 63.5 73 64.4
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 8.2e-09 63.5 73 64.4
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 8.2e-09 63.5 76 65.8
DCAR_018908 Daucus carota HOM05D002160 ORTHO05D002012 1.1e-08 63.2 73 65.8
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 1.4e-08 62.8 73 64.4
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 2.4e-08 62.0 74 66.2
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 2.4e-08 62.0 72 56.9
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 3.1e-08 61.6 68 63.2
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 4.1e-08 61.2 73 64.4
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 4.1e-08 61.2 72 63.9
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 4.1e-08 61.2 75 64.0
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 5.3e-08 60.8 73 63.0
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 7.0e-08 60.5 74 58.1
Nitab4.5_0002557g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 9.1e-08 60.1 58 70.7
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 9.1e-08 60.1 72 62.5
Sed0014826 Sechium edule HOM05D002160 ORTHO05D002012 9.1e-08 60.1 72 51.4
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 1.2e-07 59.7 74 64.9
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 1.2e-07 59.7 73 60.3
GSVIVG01024970001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.2e-07 59.7 73 61.6
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.6e-07 59.3 75 62.7
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 1.6e-07 59.3 69 62.3
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.0e-07 58.9 73 60.3
Manes.02G133200 Manihot esculenta HOM05D002160 ORTHO05D002012 2.0e-07 58.9 59 72.9
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.5e-07 58.2 73 53.4
MD04G1128900 Malus domestica HOM05D002160 ORTHO05D002012 3.5e-07 58.2 72 68.1
MD12G1141500 Malus domestica HOM05D002160 ORTHO05D002012 3.5e-07 58.2 72 63.9
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 5.9e-07 57.4 73 61.6
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 5.9e-07 57.4 73 61.6
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 5.9e-07 57.4 73 57.5
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 5.9e-07 57.4 73 58.9
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 7.7e-07 57.0 77 59.7
PGSC0003DMG400030321 Solanum tuberosum HOM05D002160 ORTHO05D002012 7.7e-07 57.0 58 63.8
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 1.0e-06 56.6 73 60.3
THA.LOC104816271 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 1.0e-06 56.6 77 61.0
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 1.3e-06 56.2 73 58.9
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.7e-06 55.8 75 61.3
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.7e-06 55.8 75 61.3
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.7e-06 55.8 74 44.6
THA.LOC104823261 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 1.7e-06 55.8 75 62.7
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 2.2e-06 55.5 72 59.7
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 2.2e-06 55.5 70 61.4
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 2.2e-06 55.5 68 58.8
ECA236G3652 Erigeron canadensis HOM05D002160 ORTHO05D002012 2.2e-06 55.5 74 59.5
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 2.2e-06 55.5 73 61.6
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 2.9e-06 55.1 75 60.0
CANSAT54G0665 Cannabis sativa HOM05D002160 ORTHO05D002012 3.8e-06 54.7 69 58.0
Gorai.007G376000 Gossypium raimondii HOM05D002160 ORTHO05D002012 3.8e-06 54.7 70 55.7
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 3.8e-06 54.7 73 56.2
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 5.0e-06 54.3 75 60.0
MBI14_g20106_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 5.0e-06 54.3 71 63.4
TPR.G23304 Trifolium pratense HOM05D002160 ORTHO05D002012 5.0e-06 54.3 71 60.6
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 6.5e-06 53.9 70 60.0
CiPaw.10G145400 Carya illinoinensis HOM05D002160 ORTHO05D002012 6.5e-06 53.9 72 61.1
Gohir.D11G345700 Gossypium hirsutum HOM05D002160 ORTHO05D002012 6.5e-06 53.9 70 55.7
Manes.08G079262 Manihot esculenta HOM05D002160 ORTHO05D002012 6.5e-06 53.9 76 57.9
SalBow3G1804 Salvia bowleyana HOM05D002160 ORTHO05D002012 6.5e-06 53.9 74 54.1
Solyc06g076140.4 Solanum lycopersicum HOM05D002160 ORTHO05D002012 6.5e-06 53.9 58 63.8
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 8.5e-06 53.5 70 55.7
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 8.5e-06 53.5 75 58.7
Os05g0111300 Oryza sativa ssp. japonica HOM05D024798 ORTHO05D002012 8.5e-06 53.5 73 56.2


User provided reference genes

Program Settings