Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 4.8e-199 697.6 341 100.0
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 1.1e-195 686.4 341 98.5
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 2.0e-149 532.7 343 76.1
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 2.0e-144 516.2 340 73.8
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.4e-142 510.0 341 72.7
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 6.0e-141 504.6 337 71.2
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 1.7e-140 503.1 338 71.0
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 3.3e-139 498.8 341 72.1
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 4.0e-137 491.9 338 71.0
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 8.9e-137 490.7 335 68.7
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 5.8e-136 488.0 340 68.8
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 9.8e-136 487.3 338 68.3
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 9.8e-136 487.3 340 68.2
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 9.8e-136 487.3 335 68.4
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 1.7e-135 486.5 335 68.1
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 2.9e-135 485.7 340 68.5
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 2.9e-135 485.7 337 68.5
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.9e-135 485.7 342 68.4
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 6.4e-135 484.6 340 67.9
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 8.3e-135 484.2 336 67.9
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 1.9e-134 483.0 336 67.6
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 3.2e-134 482.3 342 66.7
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 4.1e-134 481.9 336 67.0
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 4.1e-134 481.9 340 68.2
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 5.4e-134 481.5 334 67.4
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 5.4e-134 481.5 336 67.6
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 9.2e-134 480.7 340 68.2
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 1.2e-133 480.3 343 67.1
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 1.2e-133 480.3 344 68.3
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 1.6e-133 479.9 335 68.4
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 1.6e-133 479.9 337 67.7
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.7e-133 479.2 341 68.9
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 4.6e-133 478.4 336 69.0
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 7.8e-133 477.6 336 68.5
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 1.0e-132 477.2 337 68.0
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 1.3e-132 476.9 338 66.3
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.7e-132 476.5 341 65.7
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 5.1e-132 474.9 337 67.1
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 6.6e-132 474.6 337 68.2
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 6.6e-132 474.6 338 68.6
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 8.6e-132 474.2 338 68.9
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 8.6e-132 474.2 337 67.4
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 1.1e-131 473.8 342 68.7
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.1e-131 473.8 337 67.4
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 1.5e-131 473.4 336 66.4
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 1.9e-131 473.0 339 66.7
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 3.3e-131 472.2 342 65.5
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 4.3e-131 471.9 339 67.6
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 7.3e-131 471.1 340 68.2
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 7.3e-131 471.1 338 67.8
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 2.1e-130 469.5 337 67.4
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 3.6e-130 468.8 343 66.2
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 3.6e-130 468.8 338 65.7
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 4.7e-130 468.4 344 68.9
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 6.2e-130 468.0 345 66.4
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 1.1e-129 467.2 339 67.3
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.1e-129 467.2 344 65.7
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.8e-129 466.5 347 65.4
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 6.8e-129 464.5 337 64.7
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 8.9e-129 464.2 338 66.9
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 8.9e-129 464.2 339 65.2
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.5e-128 463.4 342 66.1
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 2.0e-128 463.0 339 66.1
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 2.6e-128 462.6 339 66.1
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 9.9e-128 460.7 339 66.4
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 9.9e-128 460.7 339 66.7
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.7e-127 459.9 340 65.3
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 2.9e-127 459.1 368 63.0
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.1e-126 457.2 344 64.5
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 2.4e-126 456.1 342 65.5
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 5.4e-126 454.9 343 64.1
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 9.2e-126 454.1 339 64.9
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 3.5e-125 452.2 341 64.2
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 1.3e-124 450.3 337 64.1
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 6.6e-124 448.0 337 63.5
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 6.6e-124 448.0 336 62.5
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 7.3e-123 444.5 337 62.6
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 7.3e-123 444.5 338 64.2
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 6.2e-122 441.4 338 63.6
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 8.1e-122 441.0 385 59.0
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.4e-121 440.3 339 63.7
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 1.8e-121 439.9 336 64.3
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 4.0e-121 438.7 339 63.4
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.6e-120 436.0 336 64.3
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 5.8e-120 434.9 334 64.4
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 5.8e-120 434.9 333 61.6
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.6e-120 434.5 334 64.4
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.9e-119 432.6 336 64.0
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 4.2e-118 428.7 378 59.0
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.2e-118 428.7 336 64.0
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.3e-116 422.9 336 62.5
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 8.7e-116 421.0 333 60.4
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 3.3e-115 419.1 346 57.5
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 1.1e-113 414.1 346 61.6
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 6.9e-113 411.4 341 60.4
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 2.6e-112 409.5 333 58.6
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 4.4e-112 408.7 338 60.1
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 7.6e-112 407.9 333 59.8
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 1.7e-111 406.8 339 61.1
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 6.0e-109 398.3 347 60.2
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 6.6e-108 394.8 287 67.9
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 1.5e-107 393.7 340 59.1
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 5.6e-107 391.7 434 48.4
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 1.3e-106 390.6 333 55.9
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 3.1e-105 386.0 262 69.5
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.1e-99 367.5 349 53.0
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 4.2e-94 349.0 254 64.6
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 6.0e-93 345.1 254 63.8
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.1e-86 324.3 246 59.8
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 3.0e-84 316.2 291 58.4
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.9e-78 297.0 192 73.4
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.5e-78 296.6 183 76.0
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 4.2e-70 269.2 347 41.8
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 8.5e-63 245.0 341 37.0
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.2e-62 241.9 204 59.8
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 8.8e-60 235.0 331 39.3
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.1e-49 199.9 198 52.5
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.5e-46 190.3 166 61.4
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.6e-45 187.6 184 52.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 4.7e-45 186.0 179 55.9
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 9.2e-41 171.8 176 51.7
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 2.3e-39 167.2 290 34.5
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 8.0e-37 158.7 216 41.7
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 5.8e-27 125.9 81 67.9
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 2.6e-19 100.5 135 37.8
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.4e-17 94.0 173 34.7
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.4e-17 94.0 173 34.7
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.4e-17 94.0 173 34.7
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 4.1e-17 93.2 173 34.7
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 8.6e-15 85.5 107 40.2
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-14 84.7 93 49.5
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.8e-13 80.5 75 56.0
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 1.1e-12 78.6 75 56.0
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.8e-12 77.8 53 62.3
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.8e-12 77.8 53 62.3
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 4.0e-12 76.6 75 54.7
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.8e-10 70.1 59 57.6
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 9.2e-09 65.5 86 41.9
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.5e-08 63.5 65 47.7
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.5e-06 57.4 40 67.5
FAN04G0473 Fragaria x ananassa HOM05D015355 ORTHO05D007549 3.3e-06 57.0 39 69.2


User provided reference genes

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