Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1308 Papaver somniferum HOM05D002214 ORTHO05D005113 3.4e-107 391.7 205 100.0
PSO384G0095 Papaver somniferum HOM05D002214 ORTHO05D005113 9.1e-52 207.6 236 52.1
PSO339G2935 Papaver somniferum HOM05D002214 ORTHO05D005113 1.1e-36 157.5 177 53.1
PSO384G1687 Papaver somniferum HOM05D002214 ORTHO05D005113 2.4e-36 156.4 184 50.0
PSO384G5131 Papaver somniferum HOM05D002214 ORTHO05D005113 7.0e-36 154.8 193 48.7
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.0e-34 151.0 175 51.4
HanXRQChr03g0082771 Helianthus annuus HOM05D002214 ORTHO05D005113 1.7e-34 150.2 201 47.3
Psat5g212520 Pisum sativum HOM05D002214 ORTHO05D005113 2.2e-34 149.8 196 48.0
PSO339G1526 Papaver somniferum HOM05D002214 ORTHO05D005113 3.8e-34 149.1 200 47.0
PSO384G1143 Papaver somniferum HOM05D002214 ORTHO05D005113 3.8e-34 149.1 200 47.0
HanXRQChr08g0226841 Helianthus annuus HOM05D002214 ORTHO05D005113 5.0e-34 148.7 201 46.3
PGR031G1630 Punica granatum HOM05D002214 ORTHO05D005113 5.0e-34 148.7 172 51.7
PSO384G0821 Papaver somniferum HOM05D002214 ORTHO05D005113 1.1e-33 147.5 180 50.0
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.5e-33 147.1 189 48.7
Eucgr.J01208 Eucalyptus grandis HOM05D002214 ORTHO05D005113 1.5e-33 147.1 172 50.6
VMungo1080G0077 Vigna mungo HOM05D002214 ORTHO05D005113 1.5e-33 147.1 172 51.7
Cc02_g28810 Coffea canephora HOM05D002214 ORTHO05D005113 1.9e-33 146.7 175 50.3
Lj3g0001707 Lotus japonicus HOM05D002214 ORTHO05D005113 1.9e-33 146.7 205 44.9
Nn2g15193 Nelumbo nucifera HOM05D002214 ORTHO05D005113 2.5e-33 146.4 172 51.2
Phvul.005G035200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 2.5e-33 146.4 173 50.9
CSS0031731 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D005113 3.2e-33 146.0 175 49.7
Glyma.04G142300 Glycine max HOM05D002214 ORTHO05D005113 4.2e-33 145.6 172 50.6
Glyma.11G159648 Glycine max HOM05D002214 ORTHO05D005113 4.2e-33 145.6 172 50.6
unitig_37.g12366 Utricularia gibba HOM05D002214 ORTHO05D005113 4.2e-33 145.6 172 51.2
Potri.009G056600 Populus trichocarpa HOM05D002214 ORTHO05D005113 5.5e-33 145.2 172 50.6
ECA233G5526 Erigeron canadensis HOM05D002214 ORTHO05D005113 7.2e-33 144.8 195 46.2
Manes.07G010700 Manihot esculenta HOM05D002214 ORTHO05D005113 7.2e-33 144.8 172 50.6
Manes.10G136000 Manihot esculenta HOM05D002214 ORTHO05D005113 7.2e-33 144.8 172 50.6
TPR.G14549 Trifolium pratense HOM05D002214 ORTHO05D005113 7.2e-33 144.8 172 50.6
Ciclev10032739m.g Citrus clementina HOM05D002214 ORTHO05D005113 9.4e-33 144.4 172 50.6
Lalb_Chr04g0263831 Lupinus albus HOM05D002214 ORTHO05D005113 9.4e-33 144.4 172 50.6
TAR623G1010 Trochodendron aralioides HOM05D002214 ORTHO05D005113 9.4e-33 144.4 172 50.6
VMungo1127G0768 Vigna mungo HOM05D002214 ORTHO05D005113 9.4e-33 144.4 172 50.0
Cpa.g.sc125.49 Carica papaya HOM05D002214 ORTHO05D005113 1.2e-32 144.1 175 49.1
CDE08G0672 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 1.2e-32 144.1 173 49.7
Ca_27724_v3 Cicer arietinum L. HOM05D002214 ORTHO05D005113 1.2e-32 144.1 172 50.0
ClCG09G004420 Citrullus lanatus HOM05D002214 ORTHO05D005113 1.2e-32 144.1 172 50.6
MELO3C023584.2 Cucumis melo HOM05D002214 ORTHO05D005113 1.2e-32 144.1 172 50.6
CsaV3_7G030720 Cucumis sativus L. HOM05D002214 ORTHO05D005113 1.2e-32 144.1 172 50.6
Dinv43403 Davidia involucrata HOM05D002214 ORTHO05D005113 1.2e-32 144.1 170 50.6
Phvul.011G183200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 1.2e-32 144.1 172 50.0
Rhsim01G0125000 Rhododendron simsii HOM05D002214 ORTHO05D005113 1.2e-32 144.1 172 50.0
Sabra16G0160600 Salix brachista HOM05D002214 ORTHO05D005113 1.2e-32 144.1 172 50.0
Atru.chr11.2514 Acer truncatum HOM05D002214 ORTHO05D005113 1.6e-32 143.7 175 49.7
Sabra09G0041400 Salix brachista HOM05D002214 ORTHO05D005113 1.6e-32 143.7 172 50.6
CAN.G909.3 Capsicum annuum HOM05D002214 ORTHO05D005113 2.1e-32 143.3 179 48.0
MBI19_g12816_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D005113 2.1e-32 143.3 172 48.8
Duzib133G1108 Durio zibethinus HOM05D002214 ORTHO05D005113 2.7e-32 142.9 172 49.4
Lsat_1_v5_gn_6_74341 Lactuca sativa HOM05D002214 ORTHO05D005113 2.7e-32 142.9 171 50.3
Medtr3g034200 Medicago truncatula HOM05D002214 ORTHO05D005113 2.7e-32 142.9 171 50.3
SalBow6G0878 Salvia bowleyana HOM05D002214 ORTHO05D005113 2.7e-32 142.9 172 50.0
Thecc.01G406300 Theobroma cacao HOM05D002214 ORTHO05D005113 2.7e-32 142.9 172 49.4
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 3.6e-32 142.5 172 49.4
Hma1.2p1_2740F.1_g327740 Hydrangea macrophylla HOM05D002214 ORTHO05D005113 3.6e-32 142.5 172 50.0
CiPaw.13G008000 Carya illinoinensis HOM05D002214 ORTHO05D005113 4.7e-32 142.1 175 48.6
CiPaw.14G003300 Carya illinoinensis HOM05D002214 ORTHO05D005113 4.7e-32 142.1 175 47.4
CANSAT80G0460 Cannabis sativa HOM05D002214 ORTHO05D005113 6.1e-32 141.7 172 48.8
QL04p010049 Quercus lobata HOM05D002214 ORTHO05D005113 6.1e-32 141.7 172 48.8
Cfa010811 Carpinus fangiana HOM05D002214 ORTHO05D005113 8.0e-32 141.4 171 49.1
Haze_03145 Corylus avellana HOM05D002214 ORTHO05D005113 8.0e-32 141.4 171 49.1
Haze_03148 Corylus avellana HOM05D002214 ORTHO05D005113 8.0e-32 141.4 171 49.1
Gohir.A11G135400 Gossypium hirsutum HOM05D002214 ORTHO05D005113 8.0e-32 141.4 171 49.7
TAR633G1565 Trochodendron aralioides HOM05D002214 ORTHO05D005113 1.0e-31 141.0 172 49.4
Nitab4.5_0001244g0050 Nicotiana tabacum HOM05D002214 ORTHO05D005113 1.4e-31 140.6 172 49.4
Sp6g30240 Schrenkiella parvula HOM05D002214 ORTHO05D005113 1.4e-31 140.6 187 47.1
Aqoxy1G00322 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 1.8e-31 140.2 172 48.8
MSTRG.17006 Avicennia marina HOM05D002214 ORTHO05D005113 1.8e-31 140.2 175 47.4
MD07G1023300 Malus domestica HOM05D002214 ORTHO05D005113 2.3e-31 139.8 172 48.3
Prupe.2G024200 Prunus persica HOM05D002214 ORTHO05D005113 2.3e-31 139.8 172 48.3
RcHm_v2.0_Chr1g0318401 Rosa chinensis HOM05D002214 ORTHO05D005113 2.3e-31 139.8 172 48.3
Sed0009169 Sechium edule HOM05D002214 ORTHO05D005113 2.3e-31 139.8 172 50.0
Solyc01g087900.3 Solanum lycopersicum HOM05D002214 ORTHO05D005113 2.3e-31 139.8 172 48.8
Sopen01g034830 Solanum pennellii HOM05D002214 ORTHO05D005113 2.3e-31 139.8 172 48.8
PGSC0003DMG400006777 Solanum tuberosum HOM05D002214 ORTHO05D005113 2.3e-31 139.8 172 48.8
FvH4_7g01790 Fragaria vesca HOM05D002214 ORTHO05D005113 3.0e-31 139.4 172 48.3
FAN03G0770 Fragaria x ananassa HOM05D002214 ORTHO05D005113 3.0e-31 139.4 172 48.3
FAN10G3956 Fragaria x ananassa HOM05D002214 ORTHO05D005113 3.0e-31 139.4 172 48.3
Nitab4.5_0008942g0030 Nicotiana tabacum HOM05D002214 ORTHO05D005113 3.0e-31 139.4 172 49.4
Sc11g0009030 Simmondsia chinensis HOM05D002214 ORTHO05D005113 3.0e-31 139.4 189 45.5
DCAR_003226 Daucus carota HOM05D002214 ORTHO05D005113 4.0e-31 139.0 171 49.1
Nitab4.5_0000087g0120 Nicotiana tabacum HOM05D002214 ORTHO05D005113 4.0e-31 139.0 172 49.4
Nitab4.5_0001676g0100 Nicotiana tabacum HOM05D002214 ORTHO05D005113 4.0e-31 139.0 172 49.4
MD02G1300400 Malus domestica HOM05D002214 ORTHO05D005113 5.2e-31 138.7 172 48.3
Potri.001G261800 Populus trichocarpa HOM05D002214 ORTHO05D005113 5.2e-31 138.7 172 48.8
SGA_v2.0_scaffold119G32765 Striga asiatica HOM05D002214 ORTHO05D005113 5.2e-31 138.7 172 48.3
Gohir.D11G141700 Gossypium hirsutum HOM05D002214 ORTHO05D005113 6.7e-31 138.3 171 49.1
Gorai.007G152100 Gossypium raimondii HOM05D002214 ORTHO05D005113 6.7e-31 138.3 171 49.1
Duzib138G1825 Durio zibethinus HOM05D002214 ORTHO05D005113 8.8e-31 137.9 172 47.7
MD02G1300500 Malus domestica HOM05D002214 ORTHO05D005113 8.8e-31 137.9 172 48.3
FAN01G2033 Fragaria x ananassa HOM05D002214 ORTHO05D005113 1.2e-30 137.5 172 47.7
Lsat_1_v5_gn_6_17421 Lactuca sativa HOM05D002214 ORTHO05D005113 1.2e-30 137.5 171 48.5
Peaxi162Scf00071g01032 Petunia axillaris HOM05D002214 ORTHO05D005113 1.2e-30 137.5 172 48.8
Aqoxy2G02029 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 1.5e-30 137.1 172 48.3
BcaNung04185 Brassica carinata HOM05D002214 ORTHO05D005113 1.5e-30 137.1 175 47.4
C02p06430 Brassica napus HOM05D002214 ORTHO05D005113 1.5e-30 137.1 175 47.4
BolC2t06589H Brassica oleracea HOM05D002214 ORTHO05D005113 1.5e-30 137.1 175 47.4
THA.LOC104819106 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 1.5e-30 137.1 172 48.3
TWI09G0624 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 1.5e-30 137.1 172 48.8
Aa31sc919G10 Aethionema arabicum HOM05D002214 ORTHO05D005113 2.0e-30 136.7 172 48.3
Thhalv10014756m.g Eutrema salsugineum HOM05D002214 ORTHO05D005113 2.0e-30 136.7 172 48.3
THA.LOC104809846 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 2.0e-30 136.7 172 48.3
Ah.10g038600 Amaranthus hybridus HOM05D002214 ORTHO05D005113 4.4e-30 135.6 176 47.2
BcaC04g19081 Brassica carinata HOM05D002214 ORTHO05D005113 4.4e-30 135.6 189 45.5
BcaNung04183 Brassica carinata HOM05D002214 ORTHO05D005113 4.4e-30 135.6 172 47.7
BolC9t59169H Brassica oleracea HOM05D002214 ORTHO05D005113 4.4e-30 135.6 189 45.5
Peaxi162Scf01270g00125 Petunia axillaris HOM05D002214 ORTHO05D005113 4.4e-30 135.6 172 48.3
TWI53G0951 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 4.4e-30 135.6 172 47.7
TWI53G1910 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 4.4e-30 135.6 172 47.7
Migut.B01260 Erythranthe guttata HOM05D002214 ORTHO05D005113 7.5e-30 134.8 172 48.3
Sed0022614 Sechium edule HOM05D002214 ORTHO05D005113 9.7e-30 134.4 172 47.7
AL6G24400 Arabidopsis lyrata HOM05D002214 ORTHO05D005113 1.3e-29 134.0 172 47.7
AT5G13780 Arabidopsis thaliana HOM05D002214 ORTHO05D005113 1.3e-29 134.0 172 47.7
Carub.0006s1196 Capsella rubella HOM05D002214 ORTHO05D005113 1.3e-29 134.0 172 47.7
Oeu047606.1 Olea europaea HOM05D002214 ORTHO05D005113 1.3e-29 134.0 168 48.8
PSO384G2386 Papaver somniferum HOM05D002214 ORTHO05D005113 2.8e-29 132.9 153 51.0
vmacro17359 Vaccinium macrocarpon HOM05D002214 ORTHO05D005113 2.8e-29 132.9 192 44.8
CARHR199660 Cardamine hirsuta HOM05D002214 ORTHO05D005113 3.7e-29 132.5 172 47.1
Os04g0635800 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D005113 6.3e-29 131.7 173 46.2
arahy.Tifrunner.gnm1.ann1.M3J26F Arachis hypogaea HOM05D002214 ORTHO05D005113 8.2e-29 131.3 195 44.1
Lj7C576T11 Lonicera japonica HOM05D002214 ORTHO05D005113 1.1e-28 131.0 183 45.9
SEGI_02460 Sequoiadendron giganteum HOM05D002214 ORTHO05D005113 1.8e-28 130.2 186 44.1
ATR0322G021 Amborella trichopoda HOM05D002214 ORTHO05D005113 2.4e-28 129.8 171 46.8
Zm00001eb069290 Zea mays HOM05D002214 ORTHO05D005113 2.4e-28 129.8 173 45.7
EL10Ac2g04370 Beta vulgaris HOM05D002214 ORTHO05D005113 5.3e-28 128.6 171 46.2
BcaC04g24254 Brassica carinata HOM05D002214 ORTHO05D005113 5.3e-28 128.6 172 45.9
Sc11g0003930 Simmondsia chinensis HOM05D002214 ORTHO05D005113 5.3e-28 128.6 183 43.2
Migut.N01799 Erythranthe guttata HOM05D002214 ORTHO05D005113 9.1e-28 127.9 176 44.9
arahy.Tifrunner.gnm1.ann1.0NW2H0 Arachis hypogaea HOM05D002214 ORTHO05D005113 2.0e-27 126.7 208 41.3
CBR_g48990 Chara braunii HOM05D002214 ORTHO05D005113 2.7e-27 126.3 173 44.5
PSO339G3802 Papaver somniferum HOM05D002214 ORTHO05D005113 3.5e-27 125.9 169 47.3
Zm00001eb431690 Zea mays HOM05D002214 ORTHO05D005113 3.5e-27 125.9 173 45.7
SGA_v2.0_scaffold4G02481 Striga asiatica HOM05D002214 ORTHO05D005113 5.9e-27 125.2 189 43.9
Pp3c7_5970 Physcomitrium patens HOM05D002214 ORTHO05D005113 1.7e-26 123.6 172 45.3
DCAR_022372 Daucus carota HOM05D002214 ORTHO05D005113 2.2e-26 123.2 170 44.1
AagrBONN_evm.TU.Sc2ySwM_368.2201 Anthoceros agrestis HOM05D002214 ORTHO05D005113 3.8e-26 122.5 171 44.4
Lj9A641T66 Lonicera japonica HOM05D002214 ORTHO05D005113 8.5e-26 121.3 134 53.0
Mapoly0014s0153 Marchantia polymorpha HOM05D002214 ORTHO05D005113 1.5e-25 120.6 169 43.2
CDE02G0928 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 1.2e-24 117.5 130 51.5
Oeu014596.2 Olea europaea HOM05D002214 ORTHO05D005113 1.2e-24 117.5 216 38.9
SMO137G0156 Selaginella moellendorffii HOM05D002214 ORTHO05D005113 1.6e-24 117.1 164 43.3
GSVIVG01032214001 Vitis vinifera HOM05D002214 ORTHO05D005113 2.7e-24 116.3 174 40.2
PSO339G2857 Papaver somniferum HOM05D002214 ORTHO05D005113 8.0e-24 114.8 231 37.7
PSO384G2456 Papaver somniferum HOM05D002214 ORTHO05D005113 1.0e-23 114.4 93 61.3
Cre08.g364450 Chlamydomonas reinhardtii HOM05D002214 ORTHO05D005113 4.4e-22 109.0 166 37.3
MD07G1016300 Malus domestica HOM05D002214 ORTHO05D005113 1.7e-21 107.1 153 44.4
MD07G1016800 Malus domestica HOM05D002214 ORTHO05D005113 1.7e-21 107.1 153 44.4
A02p02180 Brassica napus HOM05D002214 ORTHO05D005113 2.4e-20 103.2 92 57.6
PSO384G3036 Papaver somniferum HOM05D002214 ORTHO05D005113 4.1e-20 102.4 82 65.9
MCO11G341 Micromonas commoda HOM05D002214 ORTHO05D005113 7.0e-20 101.7 164 42.1
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 1.2e-19 100.9 177 36.7
BcaC08g43425 Brassica carinata HOM05D002214 ORTHO05D005113 1.7e-18 97.1 98 55.1
PRCOL_00004224 Prasinoderma coloniale HOM05D002214 ORTHO05D005113 2.3e-18 96.7 169 38.5
arahy.Tifrunner.gnm1.ann1.13N2B5 Arachis hypogaea HOM05D002214 ORTHO05D005113 4.7e-16 89.0 73 61.6
HPP92_012859 Vanilla planifolia HOM05D002214 ORTHO05D005113 5.2e-15 85.5 156 41.0
Pp3c18_3810 Physcomitrium patens HOM05D002214 ORTHO05D005113 1.8e-12 77.0 145 37.2
arahy.Tifrunner.gnm1.ann1.Y5766G Arachis hypogaea HOM05D002214 ORTHO05D009715 3.1e-12 76.3 59 62.7
arahy.Tifrunner.gnm1.ann1.F9QUKJ Arachis hypogaea HOM05D002214 ORTHO05D005113 7.0e-12 75.1 54 66.7
Cfa022421 Carpinus fangiana HOM05D002214 ORTHO05D005113 2.0e-11 73.6 82 47.6
arahy.Tifrunner.gnm1.ann1.EWEG8C Arachis hypogaea HOM05D002214 ORTHO05D005113 6.6e-10 68.6 54 59.3
A10p24570 Brassica napus HOM05D002214 ORTHO05D005113 8.6e-10 68.2 117 41.0
C09p63320 Brassica napus HOM05D002214 ORTHO05D005113 8.6e-10 68.2 117 41.0
Medtr3g030055 Medicago truncatula HOM05D002214 ORTHO05D005113 1.1e-09 67.8 80 46.2
PSO782G4346 Papaver somniferum HOM05D002214 ORTHO05D304534 5.6e-09 65.5 186 33.3
DCAR_022374 Daucus carota HOM05D002214 ORTHO05D005113 1.8e-07 60.5 127 35.4
MCO07G257 Micromonas commoda HOM05D005702 ORTHO05D007080 9.8e-06 54.7 82 35.4
unitig_46.g18668 Utricularia gibba HOM05D002214 ORTHO05D005113 9.8e-06 54.7 70 48.6


User provided reference genes

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