Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 4.3e-161 571.2 281 100.0
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 9.2e-156 553.5 281 96.4
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 7.1e-124 447.6 268 78.0
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 2.1e-123 446.0 282 74.8
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 7.9e-123 444.1 257 79.8
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.3e-120 436.8 284 74.3
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 1.6e-120 436.4 269 77.3
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 4.8e-120 434.9 267 76.0
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.8e-120 434.9 263 76.8
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.4e-119 433.3 279 73.1
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 5.3e-119 431.4 270 74.1
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 6.9e-119 431.0 283 72.1
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 4.5e-118 428.3 282 72.0
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 6.5e-117 424.5 269 74.0
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 1.4e-116 423.3 267 75.3
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 9.3e-116 420.6 248 78.6
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.1e-115 419.5 262 73.3
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 3.5e-115 418.7 258 74.8
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 4.6e-115 418.3 255 75.7
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 7.9e-115 417.5 248 77.4
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 5.1e-114 414.8 265 72.5
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 1.9e-113 412.9 246 78.0
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.9e-113 412.9 248 76.2
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 3.1e-111 405.6 246 74.8
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.3e-111 404.8 279 67.4
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 5.3e-111 404.8 279 67.4
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.0e-110 402.9 279 67.4
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 2.0e-110 402.9 268 69.4
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 5.9e-110 401.4 240 77.5
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.4e-108 396.7 279 66.3
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.7e-107 392.5 281 66.9
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 7.9e-107 391.0 268 66.8
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.3e-106 389.4 253 68.8
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 2.5e-105 386.0 244 72.5
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.9e-103 377.9 261 66.7
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 9.1e-103 377.5 322 58.7
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.0e-101 374.0 279 63.1
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.5e-100 368.2 249 67.9
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.2e-99 367.1 261 65.9
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 1.6e-99 366.7 254 66.1
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.0e-98 362.5 310 58.4
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 4.8e-96 355.1 218 72.5
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.4e-95 353.6 269 62.5
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.0e-94 349.7 211 77.3
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 3.6e-91 339.0 251 66.1
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.0e-90 337.4 267 59.6
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.5e-89 333.6 219 71.2
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.7e-88 330.1 260 58.8
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.8e-87 326.6 261 59.8
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 4.2e-84 315.5 254 60.6
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 5.2e-82 308.5 258 58.9
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 4.8e-80 302.0 206 69.9
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 1.1e-79 300.8 189 72.5
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.7e-78 296.2 263 53.2
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 5.9e-78 295.0 234 61.1
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.7e-75 286.2 213 66.7
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 2.7e-75 286.2 179 70.4
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 8.0e-75 284.6 188 71.3
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.0e-75 284.6 232 58.2
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 1.7e-72 276.9 246 58.9
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.3e-69 266.5 254 49.2
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.9e-69 266.2 254 48.8
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 8.6e-69 264.6 254 50.4
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.1e-68 264.2 254 48.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 3.6e-67 259.2 254 49.6
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.0e-65 253.4 254 46.9
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 7.5e-65 251.5 263 44.9
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 2.8e-64 249.6 168 68.5
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.9e-64 248.8 154 73.4
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 4.9e-64 248.8 183 63.4
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.7e-56 222.6 228 51.8
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.4e-50 204.1 268 35.4
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 3.4e-49 199.5 125 69.6
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.9e-47 193.7 269 33.8
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.9e-47 193.7 269 33.8
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.9e-47 193.7 269 33.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 1.1e-44 184.5 145 60.7
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 6.4e-40 168.7 97 80.4
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 4.6e-38 162.5 104 73.1
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 1.6e-35 154.1 95 76.8
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 2.0e-33 147.1 100 69.0
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 2.6e-33 146.7 97 71.1
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 2.6e-33 146.7 97 71.1
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 8.7e-29 131.7 103 58.3
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 1.1e-26 124.8 74 75.7
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 4.2e-23 112.8 118 50.0
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.5e-20 104.4 66 78.8
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.1e-10 71.6 44 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 9.9e-09 65.1 50 50.0


User provided reference genes

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